Dictyostelium discoideum cDNA Clone VFE491

Sequence VFE491

TGGTAACTGG TGATAATGGT TTAACGGCTA CTAGCGTTGC AAAGCAATGT
GGTATAATTA AAAGTGATAC ATTATTATTT ATGGGCTTAA TTCAACCATC
ATCATCTCCA TCACCAACCA ATGGTATTGA GGATGAGATT ATTTGGGAAC
CTGTTTCTCA AGATGGTAGA GGTAACATTC ATAAATTAGA TCCAACCACT
TTATTATTGG ATGAAATGAA TCGTGATTAT AATTTGATTG TCAGTGGACC
TGTTTTCAAA CAAATCTACA ATCATTATTT AGCAACTGGT TCACCTAGAT
TCATTAATAT GTTGAGACGT GGTATTGTTT ACGCAAGAAT GACACCAGAT
GAAAAACAAA GTTTGATCGA AGAGTTACAA CGTATTGGAT TATATGTTGG
TATGTGTGGT GATGGTGCAA ATGATTGTGG TGCATTAAAG GCTGCCCATG
TTGGTATATC TTTATCAGAG AGTGAAGCAT CAATAGCTGC ACCATTTACA
TCAACCATCA CCGATATCAG TTGTTGTCCA AATTTAATTA AAGAAGGTAG
AGCATCATTG GCAGTTTCTT TCAAACTCTT TCAATTTATG GGAATATATT
CATTGATTCA ATTTACTTCG GTAATCTTTT GTTATT---- ------ATTT
CCATGCAAGT GTTTTGGGTA ATTGGCAATA TCTTTACCAA GGATCTCATA
GTCATCTTTC CATTGGTAAT CTTTTTAGGT ATGACTGAAC CATGTGAAAA
ACTTTCTGTC AAACGTCCAT CTGGGAGATT GATAAGTTTA AATATGATTG
GTTCACTATT ATCTCATATC ACTGTATGCT TTGTATTCTT ACTTGTTGTT
TTCCATTTGG TTCAAAGCAA ATCTTGGTTT GACGAGCCCT TACTCGATCC
AGATAATATT TTTAATTATA TCACTACCTC TCTTTTCATT TTTGGATGCT
TCCAATATTC AATTATGTTA TTTGTATTTT CATTTGGTAA ACCATTTTTA
AAAGCAATTT ATACAAATAG ATATTTATTT TTAGTTTACA TTGTTACATT
AATTGCAAAT TTAATAATAC TATTTGGTGG CTTTGAGAAA CTTTATAATT
TCTTACAATT AAGAGTTATC CCAGTTAGTT GGAGAAGTAC AATGTTTGGT
ATGATAATAG GAAATTTAGT TGCCAATTGT CTTATTGAGC TTTCCTTCTA
TTTCTATAAA TCTAGATCAA AGAAGAAAAA GATTTTAAAT ATAAGAATTA
TTTTCTCAAA GAAAAACAAT GAATTACCAA AAGACCCAAG AGTCTTTAAT
ACTAATTCAG TTTCAATTCC AATTTATCAA GATTATTANN ATACCTTTTA
ATAAATTTAT TTTTAACA

Translated Amino Acid Sequence VFE491

VTGDNGLTATSVAKQCGIIKSDTLLFMGLIQPSSSPSPTNGIEDEIIWEPVSQDGRGNIH
KLDPTTLLLDEMNRDYNLIVSGPVFKQIYNHYLATGSPRFINMLRRGIVYARMTPDEKQS
LIEELQRIGLYVGMCGDGANDCGALKAAHVGISLSESEASIAAPFTSTITDISCCPNLIK
EGRASLAVSFKLFQFMGIYSLIQFTSVIFCY---

---ISMQVFWVIGNIFTKDLIVIFPLVIFLGMTEPCEKLSVKRPSGRLISLNMIGSLLSH
ITVCFVFLLVVFHLVQSKSWFDEPLLDPDNIFNYITTSLFIFGCFQYSIMLFVFSFGKPF
LKAIYTNRYLFLVYIVTLIANLIILFGGFEKLYNFLQLRVIPVSWRSTMFGMIIGNLVAN
CLIELSFYFYKSRSKKKKILNIRIIFSKKNNELPKDPRVFNTNSVSIPIYQDYXXTF**i
yf*

Homology VFE491 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFE491 (VFE491Q) /CSM/VF/VFE4-D/VFE491Q.Seq.d/                       2640   0.0
VHA345 (VHA345Q) /CSM/VH/VHA3-B/VHA345Q.Seq.d/                       1403   0.0
AHQ147 (AHQ147Q) /CSM/AH/AHQ1-B/AHQ147Q.Seq.d/                       1403   0.0
AHF681 (AHF681Q) /CSM/AH/AHF6-D/AHF681Q.Seq.d/                       1403   0.0
VHJ681 (VHJ681Q) /CSM/VH/VHJ6-D/VHJ681Q.Seq.d/                       1380   0.0
AHQ724 (AHQ724Q) /CSM/AH/AHQ7-A/AHQ724Q.Seq.d/                       1380   0.0
VHJ460 (VHJ460Q) /CSM/VH/VHJ4-C/VHJ460Q.Seq.d/                       1259   0.0
VHJ763 (VHJ763Q) /CSM/VH/VHJ7-C/VHJ763Q.Seq.d/                       1235   0.0
AHJ692 (AHJ692Q) /CSM/AH/AHJ6-D/AHJ692Q.Seq.d/                       1209   0.0
VFE493 (VFE493Q) /CSM/VF/VFE4-D/VFE493Q.Seq.d/                       1068   0.0

Homology VFE491 vs DNA

Sequences producing significant alignments:                    (bits)  Value  N


AZ930592|AZ930592.1 474.dhz56d05.s1 Saccharomyces unisporus...    52  3e-12  3
BE580166|BE580166.1 kq37h10.y1 TBN95TM-SSR Strongyloides st...    54  5e-12  2
AJ306929|AJ306929.1 Homo sapiens ORF for hypothetical protein.    62  2e-05  1
CB246103|CB246103.1 UI-M-FO0-cdu-p-24-0-UI.r1 NIH_BMAP_FO0 ...    62  2e-05  1
AL704543|AL704543.1 Homo sapiens mRNA; EST DKFZp686G0431_r1...    62  2e-05  1
BQ232107|BQ232107.1 AGENCOURT_7569432 NIH_MGC_92 Homo sapie...    62  2e-05  1
AL710177|AL710177.1 Homo sapiens mRNA; EST DKFZp686H0667_r1...    62  2e-05  1
BM194668|BM194668.1 EST AIH 5 REV SSH Library from Adult Ci...    62  2e-05  1
AK024639|AK024639.1 Homo sapiens cDNA: FLJ20986 fis, clone ...    62  2e-05  1
AX392500|AX392500.1 Sequence 5 from Patent WO0216591.             62  2e-05  1

Homology VFE491 vs Protein

Sequences producing significant alignments:                      (bits) Value


FP929138_1051(FP929138|pid:none) Leptosphaeria maculans v23.1.3 ...   149   2e-51
FN392322_957(FN392322|pid:none) Pichia pastoris GS115 chromosome...   153   2e-49
FM992689_210(FM992689|pid:none) Candida dubliniensis CD36 chromo...   144   8e-47
AX392500_1(AX392500|pid:none) Sequence 5 from Patent WO0216591.       140   5e-46
(Q9H7F0) RecName: Full=Probable cation-transporting ATPase 13A3;...   140   5e-46
CU640366_567(CU640366|pid:none) Podospora anserina S mat+ genomi...   154   6e-45
FN394216_439(FN394216|pid:none) Saccharomyces cerevisiae EC1118 ...   140   1e-43
CR382130_932(CR382130|pid:none) Yarrowia lipolytica strain CLIB1...   140   2e-43
BC128612_1(BC128612|pid:none) Danio rerio zgc:136762, mRNA (cDNA...   144   2e-43
(Q5XF89) RecName: Full=Probable cation-transporting ATPase 13A3;...   142   5e-43

Homology VFE491 vs Genome