Homology VFD795 vs Protein
Query= VFD795 (VFD795Q) /CSM/VF/VFD7-D/VFD795Q.Seq.d/
(1257 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF421549_1(AF421549|pid:none) Gallus gallus CDH1-D mRNA, partial... 75 1e-11
JF284509_1(JF284509|pid:none) Cherax quadricarinatus clone v1-18... 64 2e-08
BT099075_1(BT099075|pid:none) Soybean clone JCVI-FLGm-16H4 unkno... 59 7e-08
AM462492_6(AM462492|pid:none) Vitis vinifera contig VV78X177628.... 60 2e-07
EU979522_1(EU979522|pid:none) Ornithoctonus huwena clone HWEco7 ... 59 8e-07
FP929128_287(FP929128|pid:none) Leptosphaeria maculans JN3 lm_Su... 55 6e-06
CP003008_93(CP003008|pid:none) Myceliophthora thermophila ATCC 4... 47 1e-05
JN216970_1(JN216970|pid:none) Epinephelus bruneus clone JKJRRC00... 53 3e-05
AY914930_1(AY914930|pid:none) Schistosoma japonicum SJCHGC01014 ... 53 4e-05
EU955514_1(EU955514|pid:none) Zea mays clone 1535262 hypothetica... 50 2e-04
AL844509_687(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 50 4e-04
FN358262_1(FN358262|pid:none) Schistosoma mansoni genome sequenc... 49 5e-04
FP929128_285(FP929128|pid:none) Leptosphaeria maculans JN3 lm_Su... 49 6e-04
FN364425_1(FN364425|pid:none) Schistosoma mansoni genome sequenc... 48 0.001
FN365438_1(FN365438|pid:none) Schistosoma mansoni genome sequenc... 47 0.003
FN364608_1(FN364608|pid:none) Schistosoma mansoni genome sequenc... 47 0.003
FN366187_1(FN366187|pid:none) Schistosoma mansoni genome sequenc... 47 0.003
FN364380_1(FN364380|pid:none) Schistosoma mansoni genome sequenc... 47 0.003
FN361659_1(FN361659|pid:none) Schistosoma mansoni genome sequenc... 47 0.003
FN362765_1(FN362765|pid:none) Schistosoma mansoni genome sequenc... 47 0.003
FN363218_1(FN363218|pid:none) Schistosoma mansoni genome sequenc... 47 0.003
FN363801_1(FN363801|pid:none) Schistosoma mansoni genome sequenc... 47 0.003
FN365059_1(FN365059|pid:none) Schistosoma mansoni genome sequenc... 47 0.003
FN358558_1(FN358558|pid:none) Schistosoma mansoni genome sequenc... 47 0.003
FN367568_1(FN367568|pid:none) Schistosoma mansoni genome sequenc... 47 0.003
FN365673_1(FN365673|pid:none) Schistosoma mansoni genome sequenc... 47 0.003
FN364126_1(FN364126|pid:none) Schistosoma mansoni genome sequenc... 47 0.003
FN363136_1(FN363136|pid:none) Schistosoma mansoni genome sequenc... 47 0.003
FN357971_1(FN357971|pid:none) Schistosoma mansoni genome sequenc... 47 0.003
FN364052_1(FN364052|pid:none) Schistosoma mansoni genome sequenc... 47 0.003
FN365648_1(FN365648|pid:none) Schistosoma mansoni genome sequenc... 47 0.003
FN364417_1(FN364417|pid:none) Schistosoma mansoni genome sequenc... 45 0.007
FN358549_1(FN358549|pid:none) Schistosoma mansoni genome sequenc... 45 0.007
HQ206640_1(HQ206640|pid:none) Perca flavescens clone Pf_8031 CHK... 45 0.009
FN359335_1(FN359335|pid:none) Schistosoma mansoni genome sequenc... 45 0.011
FN361429_1(FN361429|pid:none) Schistosoma mansoni genome sequenc... 44 0.015
FN373437_1(FN373437|pid:none) Schistosoma mansoni genome sequenc... 44 0.019
FN359312_1(FN359312|pid:none) Schistosoma mansoni genome sequenc... 44 0.025
FQ311869_2(FQ311869|pid:none) Azospirillum lipoferum 4B plasmid ... 42 0.057
AM085146_9(AM085146|pid:none) Magnetospirillum gryphiswaldense m... 42 0.074
FN543107_181(FN543107|pid:none) Curvibacter putative symbiont of... 39 0.48
CP000890_242(CP000890|pid:none) Coxiella burnetii RSA 331, compl... 39 0.48
CP000930_2283(CP000930|pid:none) Heliobacterium modesticaldum Ic... 39 0.82
FN364050_1(FN364050|pid:none) Schistosoma mansoni genome sequenc... 38 1.1
FM179322_2504(FM179322|pid:none) Lactobacillus rhamnosus GG whol... 37 1.8
FM179322_816(FM179322|pid:none) Lactobacillus rhamnosus GG whole... 37 1.8
AP009386_1894(AP009386|pid:none) Burkholderia multivorans ATCC 1... 37 3.1
B72581(B72581)hypothetical protein APES063 - Aeropyrum pernix (s... 36 5.3
JN216989_1(JN216989|pid:none) Epinephelus bruneus clone JKJRRC00... 36 5.3
AY228468_281(AY228468|pid:none) Pinus koraiensis chloroplast, co... 36 5.3
DQ995340_1(DQ995340|pid:none) Saussurea involucrata antifreeze p... 35 6.9
>AF421549_1(AF421549|pid:none) Gallus gallus CDH1-D mRNA, partial cds.
Length = 451
Score = 74.7 bits (182), Expect = 1e-11
Identities = 72/203 (35%), Positives = 85/203 (41%), Gaps = 8/203 (3%)
Frame = -3
Query: 1144 NDPSAGSPTDTXXXXXXXLNNEI*IT---FNLYQCCHR*NDPLTLPYHSIGRSDGRCVQR 974
NDPSAGSPT+T L++++ + DP T H IG SDGRCVQR
Sbjct: 250 NDPSAGSPTETLLRLLLPLDSQVRPSSRRSGRAVADPAGADPRTSLNHPIGSSDGRCVQR 309
Query: 973 AGTYSA*GNDLRLQGIPRL*SIITKIKPSYVGNSNDYPILPDQEPFCFLH-----CSARA 809
AGTYS D L GIPR II P + S YP LP + CS R
Sbjct: 310 AGTYSTRAYDPHLLGIPRSWGIIAIPDPHHEWGSTGYPRLPAKGTHKLSQSVQRACSPRT 369
Query: 808 AQGI*GHHRPVIASDFRLLEAGSPSKKF*FVPIESDYTLLEAGDDRNHSKPQKSYRLYRL 629
+Q G RPVIA R+ E K+ P+
Sbjct: 370 SQ---GRDRPVIAQS-RVAERHLSLKEVGRRPLGG------------------------- 400
Query: 628 INTTS*QVEVSSVIGIDQTNRST 560
TS VS VIGI+QTNRST
Sbjct: 401 -RVTSKHARVSFVIGINQTNRST 422
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 3,570,117,653
Number of extensions: 75989691
Number of successful extensions: 135500
Number of sequences better than 10.0: 51
Number of HSP's gapped: 135485
Number of HSP's successfully gapped: 55
Length of query: 419
Length of database: 1,732,582,204
Length adjustment: 135
Effective length of query: 284
Effective length of database: 1,010,438,449
Effective search space: 286964519516
Effective search space used: 286964519516
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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