Dictyostelium discoideum cDNA Clone VFD795

Sequence VFD795

ACTAATAGAC TTTCGGGTTT TACCTTTTGG ATAACCGCAG TAAATCGGGG
CTAATACATA CAAGCGATGG GTGACTGGCA ACGGAAGCTC AGCGATTATT
AGCATTCTAC CAATGCCTTC GGGTTTTGGG TGATACCGAA TAATATTGCA
GATCGAGGAT TTATCTTCGA CAAGTCTACT GTGTCACTGC CCTATCAACT
TTCGATGGTA CGGTATTGGC CTACCATGGT TGTAACGGGT AACGGGGAAT
TAGGGTTCGA TTCCGGAGAG GGAGCCTGAG AAATGGCTAC CACTTCTACG
GAAGGCAGCA GGCGCGCAAA TTACTCAATC CCAATACGGG GAAGTAGTGA
CAATAAATAT CAATACCTAT CCTTTTTGGA GGGCAATTGA AATGAACACA
AATTAAAACT CTTAATTAAC ACAATTGGAG GGCAAGTCTG GTGCCAGCAG
CCGCGGTAAT TCCAGCTCCA ATAGCATATA CTAAAGTTGT TGCAGTTAAA
AAGCTCGTAG TTGAAGTTTA AGGTTTACCG GGTTTATGTC ATTTACCACT
---------- GTGGAGCGAT TTGTCTGGTC AATTCCGATA ACGGACGAGA
CCTCGACCTG CTAACTAGTA GTATTTATTA GTCGATATAG ACGATAGCTT
TTCTGGGGTT TGGAATGATT TCGGTCATCT CCTGCTTCAA GGAGTGTGTA
GTCTGACTCG ATAGGTACGA ATTAAAACTT CTTAGAGGGA CTACCTGCCT
CAAGCAGGCG GAAGTCCGAG GCAATAACAG GTCTGTGATG CCCTTAGATA
CCTTGGGCCG CACGCGCGCT ACAATGTAGG AAACAAAAAG GCTCCTGGTC
CGGAAGGATT GGGTAATCAT TTGAATTTCC TACGTAACTG GGCTTGATCT
TTGTAATTAT TGATCATAAA CGAGGAATTC CTTGTAAGCG TAAGTCATTA
CCTTATGCTG AATATGTCCC TGCCCTTTGT ACACACCGCC CGTCGCTCCT
ACCGATCGAA TGATACGGTA AAGTTAACGG ATCGTTTTAT CTGTGGCAAC
ACTGATATAA ATTAAAAGTT ATTTAAATCT CATTGTTTAG AGGAAGGAGA
AGTCGTAACA AGGTATCCGT AGGTGAACCT GCGGATGGAT CATTTTTTAT
CTTAATATCA TAAACTTTAT GTTTTTTTGG ATAATGGAAC TGCTTGCGTA
TAAAGAAATT AGGCTTTTTA ATTAAGGTTT AAGNAGTAAG TGGNCTTGTC
AGATTTA

Translated Amino Acid Sequence VFD795

tnrlsgftfwitavnrg*yiqamgdwqrklsdy*hstnafgfwvipnniadrgfifdkst
vslpyqlsmvrywptmvvtgngelgfdsgega*emattstegsrranysipirgssdnky
qylsflegn*nehklkllintiggqvwcqqpr*fqlq*hilkllqlkss*LKFKVYRVYV
IYH---

---GAICLVNSDNGRDLDLLTSSIY*si*tiaflgfgmisviscfkecvv*ldryelkll
rgttclkqaevrgnnrsvmpldtlgrtratm*etkrllvrkdwvii*isyvtgldlcny*
s*trnsl*a*vitlc*icpcplytppvaptdrmir*s*rivlsvatli*iksylnliv*r
keks*qgirr*tcgwiifylniinfmffwimellaykeirlfn*glxskwxcqi

Homology VFD795 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFD795 (VFD795Q) /CSM/VF/VFD7-D/VFD795Q.Seq.d/                       2379   0.0
VHK334 (VHK334Q) /CSM/VH/VHK3-B/VHK334Q.Seq.d/                       1326   0.0
VFM557 (VFM557Q) /CSM/VF/VFM5-C/VFM557Q.Seq.d/                       1326   0.0
VHE244 (VHE244Q) /CSM/VH/VHE2-B/VHE244Q.Seq.d/                       1312   0.0
FC-AG24 (FC-AG24Q) /CSM/FC/FC-AG/FC-AG24Q.Seq.d/                     1310   0.0
AHO642 (AHO642Q) /CSM/AH/AHO6-B/AHO642Q.Seq.d/                       1310   0.0
VHJ647 (VHJ647Q) /CSM/VH/VHJ6-B/VHJ647Q.Seq.d/                       1308   0.0
AHL576 (AHL576Q) /CSM/AH/AHL5-D/AHL576Q.Seq.d/                       1308   0.0
AHK528 (AHK528Q) /CSM/AH/AHK5-B/AHK528Q.Seq.d/                       1298   0.0
VHK855 (VHK855Q) /CSM/VH/VHK8-C/VHK855Q.Seq.d/                       1296   0.0

Homology VFD795 vs DNA

Sequences producing significant alignments:                    (bits)  Value  N


AY171066|AY171066.1 Dictyostelium discoideum extrachromosom...  1211  0.0  4
X00134|X00134.1 Dictyostelium discoideum 17S rRNA sequence.     1162  0.0  2
K02641|K02641.1 Slime mold (D.discoideum) 17S small subunit...  1162  0.0  2
X00601|X00601.1 Dictyostelium discoideum ribosomal RNA gene.     642  0.0  6
M13435|M13435.1 A.castellanii mature small subunit rRNA gen...   262  0.0  9
U07414|U07414.1 Acanthamoeba castellanii Ma ATCC 50370 18S ...   262  0.0  9
U07400|U07400.1 Acanthamoeba castellanii CDC:0981:V006 18S ...   262  0.0  9
U07411|U07411.1 Acanthamoeba palestinensis Reich ATCC 30870...   262  0.0  9
U07416|U07416.1 Acanthamoeba castellanii Neff ATCC 50373 18...   262  0.0  9
AF114438|AF114438.1 Acanthamoeba castellanii 18S ribosomal ...   262  0.0  9

Homology VFD795 vs Protein

Sequences producing significant alignments:                      (bits) Value


AF421549_1(AF421549|pid:none) Gallus gallus CDH1-D mRNA, partial...    75   1e-11
BT099075_1(BT099075|pid:none) Soybean clone JCVI-FLGm-16H4 unkno...    59   6e-08
AM462492_6(AM462492|pid:none) Vitis vinifera contig VV78X177628....    60   2e-07
EU979522_1(EU979522|pid:none) Ornithoctonus huwena clone HWEco7 ...    59   7e-07
FP929128_287(FP929128|pid:none) Leptosphaeria maculans v23.1.3 l...    55   6e-06
BA000023_1285(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,...    42   1e-05
AY914930_1(AY914930|pid:none) Schistosoma japonicum SJCHGC01014 ...    53   4e-05
EU955514_1(EU955514|pid:none) Zea mays clone 1535262 hypothetica...    50   2e-04
AL844509_687(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    50   3e-04
FN358262_1(FN358262|pid:none) Schistosoma mansoni genome sequenc...    49   4e-04

Homology VFD795 vs Genome