Dictyostelium discoideum cDNA Clone VFD768

Sequence VFD768

ATTTTCAAGA CCGACTTCTT CAGACAAAAG TAAATAAAAC ATGTCCGCAA
GTAATAAAGA TGACCAACTC ATGAAAAATG AGTTCGAAAG TACCTACGAC
AAAATTGTCG ATTCATTCGA CAATATGGAG CTCCCAAAGG ATCTCTTAAG
AGGTATCTAC TCCTATGGTT TTGAAAAGCC ATCAGCCATC CAACAAAGAG
CTATCATTCC ACTCTCAAAA GGTTTTGATA TTATTGCCCA AGCTCAATCT
GGTACTGGTA AAACTGCTAC CTTCACCGTT GGTATCTTAT CTAGAATTGA
TATTTCAGTC CTCAAATGTC AAGCTCTCAT CATTGCCCCA ACTCGTGAAC
TTGCTCAACA AATTCAAAAG GTTGTTTTAG CTTTAGGTGA ATATTTACAC
ATTAAATCAT ACGCATGTAT TGGTGGTACT AAGATTACTG ATGATATTCA
AGCCCTCCAA AGTGGTGTAC ACGTAGTTGT CGGTACCCCA GGTCGTGTCT
TTGAAATGTT ATCACGTGGT ATCATTAATC GTGACACCAT TAGAATTTTC
TGTCTTGATG AAGCTGATGA AATGTTATCA CGTGGTTTCA AGGATCAAAT
CTATGAAATT TTCAGATTC- ---------C TCTGCCACCA TGACTGATGA
AACTTTAGGT ATCACAAGCA AATTCATGCA AAACCCAGTC AGTATCCTCG
TCAAAAAGGA TGAATTAACC CTTGAAGGTA TTAGACAATT CTACGTCAAC
GTTGGTGTTG AACAAGGTAA ATTTGAAGTT TTAACCGATC TCTACGAAAC
CCTCTCTATC ACTCAATCCG TTATTTTCTG TAACACCCGT AGAAAGGTCG
ATTGGTTAAC AAGCAAAATG ACCGAACAAA AATTCACCGT CTCATCAACT
CACGGTGACC AAAAGGATCG TGATGGTATC TTACAAGCTT TCCGTTCTGG
TGCTACTCGT GTCCTCATCA CCACCGATCT CTTAGCTCGT GGTATTGATG
TCCAACAAGT ATCACTCGTT ATCAACTTTG ATTTACCAAC CAACATTGAA
AATTACATTC ATCGTATCGG TCGTTCAGGT CGTTTCGGTC GTAAGGGTGT
TGCCATCAAC TTTATCACTG ACGCTGAAAG AGGTCAAATC GATGAATTAT
CTCGTCATTA CAATACCTAC ATTGCCGAAA TGCCACAAGA CATTGGAAGT
TTCCTCTAAA CGAGTTCCAA AAATGGTTTA TAGTTCAGTT GGTCCCCATT
TGGTGAGGGC CATAGGGTTT ATAAATCGAC CGCCCCCCTC CCTATCCAAT
ACTCACACCA CAACAACATA TTTCATCCGC TCATTATAAA AACAACAAAA
ACTTCAACTC TTTTACACCT C

Translated Amino Acid Sequence VFD768

fsrptssdksk*NMSASNKDDQLMKNEFESTYDKIVDSFDNMELPKDLLRGIYSYGFEKP
SAIQQRAIIPLSKGFDIIAQAQSGTGKTATFTVGILSRIDISVLKCQALIIAPTRELAQQ
IQKVVLALGEYLHIKSYACIGGTKITDDIQALQSGVHVVVGTPGRVFEMLSRGIINRDTI
RIFCLDEADEMLSRGFKDQIYEIFRF---

---SATMTDETLGITSKFMQNPVSILVKKDELTLEGIRQFYVNVGVEQGKFEVLTDLYET
LSITQSVIFCNTRRKVDWLTSKMTEQKFTVSSTHGDQKDRDGILQAFRSGATRVLITTDL
LARGIDVQQVSLVINFDLPTNIENYIHRIGRSGRFGRKGVAINFITDAERGQIDELSRHY
NTYIAEMPQDIGSFL*tsskngl*fswspfgeghrvykstaplpiqyshhnnifhpliik
ttktstllhl

Homology VFD768 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFD768 (VFD768Q) /CSM/VF/VFD7-C/VFD768Q.Seq.d/                       2658   0.0
VFI417 (VFI417Q) /CSM/VF/VFI4-A/VFI417Q.Seq.d/                       1471   0.0
SFG770 (SFG770Q) /CSM/SF/SFG7-C/SFG770Q.Seq.d/                       1471   0.0
SFG686 (SFG686Q) /CSM/SF/SFG6-D/SFG686Q.Seq.d/                       1471   0.0
CFE621 (CFE621Q) /CSM/CF/CFE6-A/CFE621Q.Seq.d/                       1471   0.0
SFC409 (SFC409Q) /CSM/SF/SFC4-A/SFC409Q.Seq.d/                       1469   0.0
CFE834 (CFE834Q) /CSM/CF/CFE8-B/CFE834Q.Seq.d/                       1469   0.0
SFK695 (SFK695Q) /CSM/SF/SFK6-D/SFK695Q.Seq.d/                       1465   0.0
SFE202 (SFE202Q) /CSM/SF/SFE2-A/SFE202Q.Seq.d/                       1465   0.0
CFF657 (CFF657Q) /CSM/CF/CFF6-C/CFF657Q.Seq.d/                       1465   0.0

Homology VFD768 vs DNA

Sequences producing significant alignments:                    (bits)  Value  N


U78759|U78759.1 Dictyostelium discoideum IfdA (ifdA) mRNA, ...  1457  0.0  2
X80796|X80796.1 S.pombe eIF-4A mRNA for translation initiat...   115  1e-81  7
L40627|L40627.1 Schizosaccharomyces pombe cell cycle contro...   115  1e-81  7
AL132828|AL132828.1 S.pombe chromosome I cosmid c1006.           115  3e-74  7
AX537016|AX537016.1 Sequence 617 from Patent WO02064766.          58  3e-44  6
AX536980|AX536980.1 Sequence 581 from Patent WO02064766.          58  3e-44  6
D84472|D84472.1 Candida albicans DNA for translation initia...    60  7e-44  6
AU011976|AU011976.1 Schizosaccharomyces pombe cDNA, clone s...    66  3e-40  5
AY098962|AY098962.1 Arabidopsis thaliana AT3g13920/MDC16_4 ...    94  2e-39  7
AY091304|AY091304.1 Arabidopsis thaliana putative eukaryoti...    94  2e-39  7

Homology VFD768 vs Protein

Sequences producing significant alignments:                      (bits) Value


U78759_1(U78759|pid:none) Dictyostelium discoideum IfdA (ifdA) m...   379   0.0
JO843767_1(JO843767|pid:none) TSA: Amblyomma maculatum Am-12062 ...   261   e-138
CP001142_274(CP001142|pid:none) Phaeodactylum tricornutum CCAP 1...   257   e-137
FQ857297_19(FQ857297|pid:none) Piriformospora indica PIRI_contig...   258   e-135
DQ667140_1(DQ667140|pid:none) Callinectes sapidus eukaryotic ini...   263   e-134
(P47943) RecName: Full=ATP-dependent RNA helicase eIF4A;        ...   254   e-134
HB811396_1(HB811396|pid:none) Sequence 160610 from Patent EP2090...   253   e-134
(P41376) RecName: Full=Eukaryotic initiation factor 4A-1;       ...   253   e-133
CP002686_1848(CP002686|pid:none) Arabidopsis thaliana chromosome...   253   e-133
HB811472_1(HB811472|pid:none) Sequence 160686 from Patent EP2090...   251   e-133

Homology VFD768 vs Genome