Dictyostelium discoideum cDNA Clone VFD241

Sequence VFD241

TATTAAAGTT TAATTAAACA ATAAAATGTC AAAAGTTCAA TTACCAAACA
CAAAATTATT TATTAATAAT GAATGGGTAG AGTCAGTTTC TGGAAAGAAA
TTTAAAACAT TTAATCCAGT GAATGAAGAA TTAATTTGTG AAGTTTCTGA
AGGTGATAAA GCTGATGTTG ATATTGCAGT GAAAGCAGCA AGAGAAGCAT
TAGAAAATGG AGAATGGAGT AAAATGACAT CTGAAGATAG AGGTAGAATT
ATATTAAAAT TTGCAGATTT AATTGAAAAA CATAAAGATA ATTTAGCACA
ATTAGAAACA TTAGATAATG GTAAACCATT GACAGCATCA AAAGGATATG
ATATAACACA ATCAGAAAAG ACTCTTCGTT ATTTCGGTGG TTGGGCTGAT
AAAATTCAAG GTAAAACCAT TCCAATTAGT AATGAATATA CATCAATTAC
CAGACATGAA CCAATTGGTG TAGTTGCTTT AATTGTTGCT TGGAATTATC
CATGTATGTT ATTATGTTGG AAATTGGGAC CAGCTTTAGC TGCAGGTTGC
ACAATCGTTG CTAAACCATC TGAATTCACC CCATTGACTG CGTTATATCT
TTGTGAGTTA ATTAAAGAAG CTGGTTTCCC ACCTGGTGTT TTC-------
---TAACGAC TGTGACGTTA ACCATATTGC ACAATGTGCT AAGGATTACG
TTTTCGCCAA TAGCATGCAG TCATGTTGTG CTCCATCAAG ATTCTTTGTT
CAAGAGAATA TCTATGAAGC ATTTTTACAA ATTTTCACAG AGAATATTAA
ATTATTAAAA GTTGGTGATC CAAATGTAAA TGGTACAAAT TTAGGCCCAT
TAGTTAGTAA ACAACAACAT GATCGTGTAT TAGGTTACAT CCAAAAAGGT
AAAGAAGAAG GTGCAACTTG TCATTTAGGT GGTGGTAATT ATCATCATGC
CGATGGTAAA GGTTATTTCG TTCAACCAAC TATTTTCACC AATGTCACTG
ATGATATGAC AATTTGTAAA GAAGAAATCT TTGGTCCTGT TGTTGTAATT
TTACCATTCA AAACTGTTGA TGAAGTAATT AAAAGAGCAA ATAACACAAC
CTATGGTTTA GCAGCTGGTG TTTGGACTAA AGATATCAGT TTAGCATTAA
ATGTTTCAAA TAAATTAAAA AGTGGTTCAG TTTGGATTAA TGAATATTAT
TCAATCATGC CATCAATACC ATTTGGTGGT TATAAACAAT CTGGTATTGG
TCGTGACCTA TCTGAATATG CAATTCAAAG TTATTTATCT GTTAAAGCTG
TTACAATTGC TCATAAAACT TTACATGCTC AACAACAATA ACAACAACAA
ACAATAAAAT AAAATACTTT TAT

Translated Amino Acid Sequence VFD241

ikv*LNNKMSKVQLPNTKLFINNEWVESVSGKKFKTFNPVNEELICEVSEGDKADVDIAV
KAAREALENGEWSKMTSEDRGRIILKFADLIEKHKDNLAQLETLDNGKPLTASKGYDITQ
SEKTLRYFGGWADKIQGKTIPISNEYTSITRHEPIGVVALIVAWNYPCMLLCWKLGPALA
AGCTIVAKPSEFTPLTALYLCELIKEAGFPPGVF---

---NDCDVNHIAQCAKDYVFANSMQSCCAPSRFFVQENIYEAFLQIFTENIKLLKVGDPN
VNGTNLGPLVSKQQHDRVLGYIQKGKEEGATCHLGGGNYHHADGKGYFVQPTIFTNVTDD
MTICKEEIFGPVVVILPFKTVDEVIKRANNTTYGLAAGVWTKDISLALNVSNKLKSGSVW
INEYYSIMPSIPFGGYKQSGIGRDLSEYAIQSYLSVKAVTIAHKTLHAQQQ*qqqtik*n
tf

Homology VFD241 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFD241 (VFD241Q) /CSM/VF/VFD2-B/VFD241Q.Seq.d/                       2575   0.0
VSD456 (VSD456Q) /CSM/VS/VSD4-C/VSD456Q.Seq.d/                       1308   0.0
VFM553 (VFM553Q) /CSM/VF/VFM5-C/VFM553Q.Seq.d/                       1298   0.0
VFA669 (VFA669Q) /CSM/VF/VFA6-C/VFA669Q.Seq.d/                       1257   0.0
VFM249 (VFM249Q) /CSM/VF/VFM2-C/VFM249Q.Seq.d/                       1253   0.0
VFH550 (VFH550Q) /CSM/VF/VFH5-C/VFH550Q.Seq.d/                       1249   0.0
CFJ180 (CFJ180Q) /CSM/CF/CFJ1-D/CFJ180Q.Seq.d/                       1245   0.0
SFF427 (SFF427Q) /CSM/SF/SFF4-B/SFF427Q.Seq.d/                       1235   0.0
VSC495 (VSC495Q) /CSM/VS/VSC4-D/VSC495Q.Seq.d/                       1031   0.0
SSG684 (SSG684Q) /CSM/SS/SSG6-D/SSG684Q.Seq.d/                        777   0.0

Homology VFD241 vs DNA

Sequences producing significant alignments:                    (bits)  Value  N


U70317|U70317.1 Dictyostelium discoideum HydA (hydA) gene, ...  1215  0.0  3
AX619230|AX619230.1 Sequence 2193 from Patent WO02094868.         56  1e-09  3
AR354367|AR354367.1 Sequence 485 from patent US 6593114.          56  3e-09  3
BX559412|BX559412.1 Glossina morsitans morsitans (Tseatse f...    46  4e-08  3
AX619692|AX619692.1 Sequence 2655 from Patent WO02094868.         48  2e-07  4
BX554263|BX554263.1 Glossina morsitans morsitans (Tseatse f...    46  5e-07  3
Y17825|Y17825.1 Agaricus bisporus aldA and echA genes.            40  3e-06  4
AE017033|AE017033.1 Bacillus anthracis str. Ames section 10...    46  3e-06  12
AX536902|AX536902.1 Sequence 503 from Patent WO02064766.          40  9e-06  4
BX559491|BX559491.1 Glossina morsitans morsitans (Tseatse f...    46  1e-05  2

Homology VFD241 vs Protein

Sequences producing significant alignments:                      (bits) Value


U70317_1(U70317|pid:none) Dictyostelium discoideum HydA (hydA) g...   461   e-128
CP001291_3666(CP001291|pid:none) Cyanothece sp. PCC 7424, comple...   230   1e-58
CP002198_4840(CP002198|pid:none) Cyanothece sp. PCC 7822, comple...   227   1e-57
CP000127_2504(CP000127|pid:none) Nitrosococcus oceani ATCC 19707...   224   1e-56
CP001907_2806(CP001907|pid:none) Bacillus thuringiensis serovar ...   223   2e-56
CP002086_479(CP002086|pid:none) Nitrosococcus watsoni C-113, com...   223   2e-56
CP000393_2265(CP000393|pid:none) Trichodesmium erythraeum IMS101...   222   3e-56
DQ767721_1(DQ767721|pid:none) Beauveria bassiana putative aldehy...   220   2e-55
CP000903_2567(CP000903|pid:none) Bacillus weihenstephanensis KBA...   219   2e-55
(Q8MI17) RecName: Full=Retinal dehydrogenase 1;          Short=R...   219   2e-55

Homology VFD241 vs Genome