Homology VFD215 vs DNA
Query= VFD215 (VFD215Q) /CSM/VF/VFD2-A/VFD215Q.Seq.d/
(1196 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
new_ddbjhum.seq; ddbjpri.seq; new_ddbjpri.seq; ddbjrod1.seq;
ddbjrod2.seq; ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq;
new_ddbjrod.seq; ddbjmam.seq; new_ddbjmam.seq; ddbjvrt1.seq;
ddbjvrt2.seq; new_ddbjvrt.seq; ddbjinv1.seq; ddbjinv2.seq;
ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq; new_ddbjinv.seq;
ddbjpln1.seq; ddbjpln2.seq; ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq;
ddbjpln6.seq; new_ddbjpln.seq; ddbjbct1.seq; ddbjbct2.seq;
ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq; ddbjvrl3.seq;
new_ddbjvrl.seq; ddbjphg.seq; new_ddbjphg.seq; ddbjuna.seq;
new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq; ddbjgss11.seq;
ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq; ddbjgss15.seq;
ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq; ddbjgss19.seq;
ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq; ddbjgss22.seq;
ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq; ddbjgss26.seq;
ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq; ddbjgss3.seq;
ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq; ddbjgss33.seq;
ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq; ddbjgss37.seq;
ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq; ddbjgss40.seq;
ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq; ddbjgss44.seq;
ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq; ddbjgss48.seq;
ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq; ddbjgss51.seq;
ddbjgss52.seq; ddbjgss53.seq; ddbjgss6.seq; ddbjgss7.seq;
ddbjgss8.seq; ddbjgss9.seq; new_ddbjgss1.seq; new_ddbjgss2.seq;
new_ddbjgss3.seq; new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; new_ddbjhtg1.seq; new_ddbjhtg2.seq;
ddbjpat1.seq; ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq;
ddbjpat6.seq; ddbjpat7.seq; new_ddbjpat.seq; ddbjsts1.seq;
ddbjsts2.seq; new_ddbjsts.seq; ddbjsyn.seq; new_ddbjsyn.seq;
est_atha1.seq; new_est_atha1.seq; est_cele1.seq; new_est_cele1.seq;
est_drer1.seq; new_est_drer1.seq; est_dmel1.seq; new_est_dmel1.seq;
est_gmax1.seq; new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; new_est_hum1.seq; est_lesc1.seq;
new_est_lesc1.seq; est_mous1.seq; est_mous2.seq; est_mous3.seq;
new_est_mous1.seq; est_osat1.seq; new_est_osat1.seq; est_rnor1.seq;
new_est_rnor1.seq; est_xlae1.seq; new_est_xlae1.seq; est_zmay1.seq;
new_est_zmay1.seq; est_rest1.seq; est_rest2.seq; new_est_rest1.seq
24,929,324 sequences; P,631,589,963 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
BC029376|BC029376.1 Homo sapiens, hypothetical protein PTD0... 48 1e-11 4
BF936899|BF936899.1 EST459954 Schistosoma mansoni female, P... 44 2e-11 4
AF134478|AF134478.1 Homo sapiens GTP-binding protein mRNA, ... 48 2e-11 4
BD227316|BD227316.1 Secreted proteins and polynucleotides e... 48 2e-11 4
AL833441|AL833441.1 Homo sapiens mRNA; cDNA DKFZp313H1942 (... 48 2e-11 4
AX210655|AX210655.1 Sequence 297 from Patent WO0157058. 48 2e-11 4
BD248762|BD248762.1 GTPase associated proteins. 48 2e-11 4
BC012842|BC012842.1 Homo sapiens, Similar to hypothetical p... 48 2e-11 4
BF699380|BF699380.1 602125956F1 NIH_MGC_56 Homo sapiens cDN... 48 7e-11 3
BH136432|BH136432.1 ENTOB10TF Entamoeba histolytica Sheared... 54 2e-10 4
AL136546|AL136546.1 Homo sapiens mRNA; cDNA DKFZp761C10121 ... 48 2e-10 4
BC029207|BC029207.1 Mus musculus RIKEN cDNA 2810409H07 gene... 54 3e-10 4
BC011318|BC011318.1 Mus musculus RIKEN cDNA 2810409H07 gene... 54 3e-10 4
BG180011|BG180011.1 602329562F1 NIH_MGC_91 Homo sapiens cDN... 48 4e-10 3
AL021878|AL021878.2 Human DNA sequence from clone RP1-257I2... 46 4e-10 5
AC117987|AC117987.2 Felis catus clone RP86-72J15, WORKING D... 54 4e-10 4
AL516522|AL516522.2 human full-length cDNA 5-PRIME end of c... 48 2e-09 3
BD127239|BD127239.1 Primer for synthesizing full-length cDN... 48 4e-09 3
AK074710|AK074710.1 Homo sapiens cDNA FLJ90229 fis, clone N... 48 4e-09 3
BD156155|BD156155.1 Primer for synthesizing full-length cDN... 48 5e-09 3
AK027523|AK027523.1 Homo sapiens cDNA FLJ14617 fis, clone N... 48 5e-09 3
CD235701|CD235701.1 SS1_37_E02.b1_A012 Salt-stressed seedli... 62 7e-09 3
CD211097|CD211097.1 HS1_61_A04.b1_A012 Heat-shocked seedlin... 62 7e-09 3
CB928193|CB928193.1 ABA1_37_D03.b1_A012 Abscisic acid-treat... 62 8e-09 3
CD208339|CD208339.1 HS1_37_E12.b1_A012 Heat-shocked seedlin... 62 9e-09 3
CD229002|CD229002.1 CCC1_11_H09.b1_A007 Callus culture/cell... 62 9e-09 3
BU718816|BU718816.1 SJM2CNF09 SJM Schistosoma japonicum cDN... 48 1e-08 4
CF071735|CF071735.1 FE1_18_H12.b1_A002 Iron-deficient seedl... 62 1e-08 3
BU723242|BU723242.1 SJMASG10 SJM Schistosoma japonicum cDNA... 48 1e-08 4
AI975066|AI975066.1 EST269660 Schistosoma mansoni female, P... 44 1e-08 3
BX419580|BX419580.1 human full-length cDNA 5-PRIME end of c... 48 2e-08 3
W04164|W04164.1 za54e12.r1 Soares fetal liver spleen 1NFLS ... 48 3e-08 2
BU719241|BU719241.1 SJM2CSB07 SJM Schistosoma japonicum cDN... 48 4e-08 4
N35525|N35525.1 yx61b02.r1 Soares melanocyte 2NbHM Homo sap... 48 4e-08 2
BM835735|BM835735.1 K-EST0110966 S11SNU1 Homo sapiens cDNA ... 48 4e-08 2
AI874354|AI874354.1 tz64g05.x1 NCI_CGAP_Ov35 Homo sapiens c... 48 4e-08 2
BQ486901|BQ486901.1 1091049E05.x1 1091 - Immature ear with ... 66 4e-08 2
CB149170|CB149170.1 K-EST0205655 L15CKK1 Homo sapiens cDNA ... 48 5e-08 2
AA608631|AA608631.1 ae55a05.s1 Stratagene lung carcinoma 93... 48 5e-08 2
BM310676|BM310676.1 ig47a12.y1 HR85 islet Homo sapiens cDNA... 48 5e-08 2
AV716790|AV716790.1 Homo sapiens cDNA clone:DCBAZC03, 5'end... 48 5e-08 2
BE871220|BE871220.1 601448907F1 NIH_MGC_65 Homo sapiens cDN... 48 5e-08 2
BG195974|BG195974.1 RST15057 Athersys RAGE Library Homo sap... 48 6e-08 2
BQ429573|BQ429573.1 AGENCOURT_7901657 NIH_MGC_82 Homo sapie... 48 6e-08 2
AX595870|AX595870.1 Sequence 1524 from Patent EP1258494. 50 6e-08 4
BG291021|BG291021.1 602386819F1 NIH_MGC_93 Homo sapiens cDN... 48 6e-08 2
BG776327|BG776327.1 602663404F1 NIH_MGC_59 Homo sapiens cDN... 48 6e-08 2
BQ437576|BQ437576.1 AGENCOURT_7919362 NIH_MGC_72 Homo sapie... 48 6e-08 2
BE882408|BE882408.1 601509441F1 NIH_MGC_71 Homo sapiens cDN... 48 7e-08 2
BX326642|BX326642.1 human full-length cDNA 3-PRIME end of c... 48 7e-08 2
BX347927|BX347927.1 human full-length cDNA 5-PRIME end of c... 48 7e-08 2
BM459495|BM459495.1 AGENCOURT_6418051 NIH_MGC_71 Homo sapie... 48 7e-08 2
BU193440|BU193440.1 AGENCOURT_7953878 NIH_MGC_67 Homo sapie... 48 7e-08 2
BU153781|BU153781.1 AGENCOURT_7827865 NIH_MGC_67 Homo sapie... 48 7e-08 2
BF984613|BF984613.1 602309945F1 NIH_MGC_88 Homo sapiens cDN... 48 7e-08 2
BX409503|BX409503.1 human full-length cDNA 5-PRIME end of c... 48 7e-08 2
BG164685|BG164685.1 602341789F1 NIH_MGC_89 Homo sapiens cDN... 48 7e-08 2
BX432109|BX432109.1 human full-length cDNA 3-PRIME end of c... 48 7e-08 2
BX430769|BX430769.1 human full-length cDNA 5-PRIME end of c... 48 7e-08 2
BI863769|BI863769.1 kx48b08.y1 Parastrongyloides trichosuri... 70 7e-08 1
BQ932977|BQ932977.1 AGENCOURT_8826226 Lupski_sciatic_nerve ... 48 7e-08 2
AL568510|AL568510.2 human full-length cDNA 3-PRIME end of c... 48 7e-08 2
BM452663|BM452663.1 AGENCOURT_6401360 NIH_MGC_85 Homo sapie... 48 8e-08 2
BX397425|BX397425.1 human full-length cDNA 3-PRIME end of c... 48 9e-08 2
BX333036|BX333036.1 human full-length cDNA 3-PRIME end of c... 48 9e-08 2
AX188365|AX188365.1 Sequence 4060 from Patent WO0142467. 48 1e-07 2
Z35894|Z35894.1 S.cerevisiae chromosome II reading frame OR... 50 5e-07 4
CB928373|CB928373.1 ABA1_15_G06.b1_A012 Abscisic acid-treat... 62 5e-07 2
BE363477|BE363477.1 WS1_63_D07.g1_A002 Water-stressed 1 (WS... 54 9e-07 3
CB272117|CB272117.1 taa31b03.x2 Hydra EST -II Hydra magnipa... 38 2e-06 3
BU889302|BU889302.1 P019B08 Populus petioles cDNA library P... 58 2e-06 2
BZ392738|BZ392738.1 EINCO03TF EI_10_12_KB Entamoeba invaden... 48 3e-06 3
BI703731|BI703731.1 kx09g06.y3 Parastrongyloides trichosuri... 42 3e-06 3
BI703741|BI703741.1 kx15e10.y3 Parastrongyloides trichosuri... 42 4e-06 3
BX400623|BX400623.1 human full-length cDNA 3-PRIME end of c... 48 4e-06 2
AL515790|AL515790.2 human full-length cDNA 3-PRIME end of c... 46 5e-06 2
BX428126|BX428126.1 human full-length cDNA 3-PRIME end of c... 46 5e-06 2
AL515791|AL515791.2 human full-length cDNA 5-PRIME end of c... 52 6e-06 3
BE649231|BE649231.1 UI-M-AI1-afn-a-06-0-UI.r1 NIH_BMAP_MBS_... 54 7e-06 2
BE640214|BE640214.1 946079H04.x1 946 - tassel primordium pr... 58 7e-06 2
CF038744|CF038744.1 QCH28a09.yg QCH Zea mays cDNA clone QCH... 58 7e-06 2
BE552590|BE552590.1 946079H04.y1 946 - tassel primordium pr... 58 8e-06 2
AI264998|AI264998.1 uk01c09.y1 Schiller mouse MAC13 Mus mus... 54 8e-06 2
AA571870|AA571870.1 vl95h11.r1 Knowles Solter mouse blastoc... 54 8e-06 2
AA066501|AA066501.1 ml72e12.r1 Stratagene mouse kidney (#93... 54 8e-06 2
Z98978|Z98978.1 S.pombe chromosome I cosmid c27E2. 54 8e-06 2
CD981273|CD981273.1 QAI22c10.yg QAI Zea mays cDNA clone QAI... 58 8e-06 2
BU092716|BU092716.1 946157A05.y1 946 - tassel primordium pr... 58 8e-06 2
CF056264|CF056264.1 QCO17a03.yg QCO Zea mays cDNA clone QCO... 58 8e-06 2
AA455372|AA455372.1 aa03a03.r1 Soares_NhHMPu_S1 Homo sapien... 48 8e-06 2
AW744499|AW744499.1 ur33h07.y1 Soares_mouse_NMBP Mus muscul... 54 9e-06 2
CF039866|CF039866.1 QCH5e04.yg QCH Zea mays cDNA clone QCH5... 58 9e-06 2
BM382176|BM382176.1 MEST545-G03.univ ISUM6 Zea mays cDNA cl... 58 9e-06 2
CF038924|CF038924.1 QCH2d12.yg QCH Zea mays cDNA clone QCH2... 58 9e-06 2
CD564694|CD564694.1 B0483C01-5 NIA Mouse E6.5 Whole Embryo ... 54 9e-06 2
BQ486902|BQ486902.1 1091049E05.y1 1091 - Immature ear with ... 58 9e-06 2
CD981171|CD981171.1 QAI20h10.yg QAI Zea mays cDNA clone QAI... 58 9e-06 2
CF039611|CF039611.1 QCH38h03.yg QCH Zea mays cDNA clone QCH... 58 1e-05 2
CF049026|CF049026.1 QCL2h05.yg QCL Zea mays cDNA clone QCL2... 58 1e-05 2
CB057501|CB057501.1 NISC_js05d02.w1 Soares NMBP1 Mus muscul... 54 1e-05 2
>BC029376|BC029376.1 Homo sapiens, hypothetical protein PTD004,
clone MGC:32564 IMAGE:4658276, mRNA, complete cds.
Length = 1406
Score = 30.2 bits (15), Expect(4) = 1e-11
Identities = 27/31 (87%)
Strand = Plus / Plus
Query: 110 aaatgggtgttgttggtatgccaaatgttgg 140
|||| ||| ||||||| |||||||||||||
Sbjct: 136 aaattggtattgttggattgccaaatgttgg 166
Score = 28.2 bits (14), Expect(4) = 1e-11
Identities = 29/34 (85%)
Strand = Plus / Plus
Query: 182 cagctgaaaatttcccattttgtactattgatcc 215
|||| ||||| ||||| || || |||||||||||
Sbjct: 208 cagcagaaaacttcccgttctgcactattgatcc 241
Score = 48.1 bits (24), Expect(4) = 1e-11
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 724 aatctttctgaagaagatttcattagaaagaagaataaatggtt 767
|||||||||||| |||| | |||||||||||| || ||||||||
Sbjct: 753 aatctttctgaaaaagactacattagaaagaaaaacaaatggtt 796
Score = 46.1 bits (23), Expect(4) = 1e-11
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1036 attcacactgatttcgaaaaaggtttcattatggctgaa 1074
|||||||| ||||| ||||| || |||||||||||||||
Sbjct: 1065 attcacacagattttgaaaagggattcattatggctgaa 1103
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 36846112
Number of Sequences: 24929324
Number of extensions: 36846112
Number of successful extensions: 3142493
Number of sequences better than 10.0: 746
length of query: 1196
length of database: P,631,589,963
effective HSP length: 23
effective length of query: 1173
effective length of database: P,058,215,511
effective search space: 37604286794403
effective search space used: 37604286794403
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 10 (19.8 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 200 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
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