Dictyostelium discoideum cDNA Clone VFD158

Sequence VFD158

GAATATGATC ATGATAAAGA AGAATTTATT ATAAATTCAC CAACTATTAC
AAGTCAAAAA TATTTTATCG GTGGATCAGC AAAGAATGCA ACACATACAA
TTATTATGGC ACAATTAAAA GTTAGTGGTA AGATGGAAGG AGTTCATGCA
TTTGTTGCAA GAATTAGAAA TGATGATGGT AGTCTAGTGA AGGGTGTTGA
TATTAGAGAT TGTGGTGTAA AGATGGCTTT GAATGGTGTT GATAATGGTA
GAATCATGTT TAAAGATTTA CATATACCAA GAGACCAATT ATTGAATAGA
TTTGGTGGAG TTAACAAAGC AGGCATTTAC ACATCACCAA TTAATCCTGC
AAATAAACGT TTTGCCAATA CCATTGGTGC ATTGGTACTT GGTCGTTACA
TTGTTTCAAT TGGGTCAGTT GCATTTAATT CAGTTGGCTT GACCACGGCA
ATTAGATATT CATTCTCTAG AAAACAATTC CAAGGTTCAG ATCCAAAATT
CGAGAAACAG TTAATATCCT ATTCCTCGCA TAGAAAACGT TTAATTCCAC
ATTTGGCAAA CACCTACGCC ACCCATTTCT CAAATAATTA TCTATTGGAT
TTATTGTCTG AAAAAGAGAA A--------- -TCAACTCGT GATTGTCTTC
AAGAGTGTAG AGAGGCTTGT GGTGGTCAAG GGTTCTTGAG TGAGAATTTA
ATTGGTAATT TCAAATCAGA GACTGAAATC TATACAACTT TCGAAGGTGA
TAATATACTA TTATATCAAC AAGTTGCCAA ATTCATGTTA TCCGAATCTA
GAAAGAATCC ACCAACAGAT TATCAACAAC CTTCAAATGA ACAAAAACAA
AGAACTGATA GAAATTACAT TAGATCTTTC GATTTCTTAT TGGAAGCTTT
AAATTCAAGA TTAAATCAAA CCATTCAATA TGTAACTGAG AAATTAAGTG
ATTCCGTCTC TGAAGGTTCT GCAATTATGG ACGCTTGGAA TGATAATGGT
ACCTATATCG TTCGTTTAGG TGTTGCTTAT ACTGAAAAAA CTATCCTCGA
TAAATTCATT GCCGCTGTTA ACAATTATCC TGATGAAAAC ACTAGAAATG
CTCTCAAACT TTTAGTTTCA CTCTATGTAT TAAATATTAT AGATCGTGAT
AATTGGTTCT TAAAATATCA ATTCATCTCA CCTCAACAAT CTGAATCAAT
TTCAATTCAA ATCTTAGAAC TTTGTAAAGA AATTGTTCCT TATTCAATAT
CTTTAACTGA TGCTTTAGGT TTGATCATCA AAGATTAGGT CCAATTGCTG
GTGATGGATT TCAAGAAATA AATTTTAAAA AATAAAATAA AATAAAATAA
ACAATTTAAA

Translated Amino Acid Sequence VFD158

EYDHDKEEFIINSPTITSQKYFIGGSAKNATHTIIMAQLKVSGKMEGVHAFVARIRNDDG
SLVKGVDIRDCGVKMALNGVDNGRIMFKDLHIPRDQLLNRFGGVNKAGIYTSPINPANKR
FANTIGALVLGRYIVSIGSVAFNSVGLTTAIRYSFSRKQFQGSDPKFEKQLISYSSHRKR
LIPHLANTYATHFSNNYLLDLLSEKEK---

---STRDCLQECREACGGQGFLSENLIGNFKSETEIYTTFEGDNILLYQQVAKFMLSESR
KNPPTDYQQPSNEQKQRTDRNYIRSFDFLLEALNSRLNQTIQYVTEKLSDSVSEGSAIMD
AWNDNGTYIVRLGVAYTEKTILDKFIAAVNNYPDENTRNALKLLVSLYVLNIIDRDNWFL
KYQFISPQQSESISIQILELCKEIVPYSISLTDALGLIIKD*vqllvmdfkk*ilknkik
*nkqfk

Homology VFD158 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFD158 (VFD158Q) /CSM/VF/VFD1-C/VFD158Q.Seq.d/                       2547   0.0
SFH389 (SFH389Q) /CSM/SF/SFH3-D/SFH389Q.Seq.d/                       1326   0.0
VFN377 (VFN377Q) /CSM/VF/VFN3-D/VFN377Q.Seq.d/                       1156   0.0
VFH322 (VFH322Q) /CSM/VF/VFH3-A/VFH322Q.Seq.d/                       1090   0.0
VHN395 (VHN395Q) /CSM/VH/VHN3-D/VHN395Q.Seq.d/                        848   0.0
FC-IC0942 (FC-IC0942Q) /CSM/FC-IC/FC-IC0942Q.Seq.d/                   731   0.0
SLK411 (SLK411Q) /CSM/SL/SLK4-A/SLK411Q.Seq.d/                        728   0.0
VHF315 (VHF315Q) /CSM/VH/VHF3-A/VHF315Q.Seq.d/                        638   0.0
VHH508 (VHH508Q) /CSM/VH/VHH5-A/VHH508Q.Seq.d/                         44   0.006
VHC257 (VHC257Q) /CSM/VH/VHC2-C/VHC257Q.Seq.d/                         44   0.006

Homology VFD158 vs DNA

Sequences producing significant alignments:                    (bits)  Value  N


AC117081|AC117081.1 Dictyostelium discoideum chromosome 2 m...  1271  0.0  3
AC117076|AC117076.2 Dictyostelium discoideum chromosome 2 m...  1271  0.0  3
CF027735|CF027735.1 QCB24g12.yg QCB Zea mays cDNA clone QCB...    34  0.018  3
AP006084|AP006084.1 Lotus corniculatus var. japonicus genom...    46  0.032  8
CF026667|CF026667.1 QCB10d02.yg QCB Zea mays cDNA clone QCB...    32  0.044  3
CF027842|CF027842.1 QCB2c01.yg QCB Zea mays cDNA clone QCB2...    32  0.052  3
CF027785|CF027785.1 QCB25e02.yg QCB Zea mays cDNA clone QCB...    32  0.056  3
CF026740|CF026740.1 QCB11d07.yg QCB Zea mays cDNA clone QCB...    32  0.056  3
CF028086|CF028086.1 QCB5d05.yg QCB Zea mays cDNA clone QCB5...    32  0.056  3
CF028070|CF028070.1 QCB5b09.yg QCB Zea mays cDNA clone QCB5...    32  0.058  3

Homology VFD158 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC117081_72(AC117081|pid:none) Dictyostelium discoideum chromoso...   406   0.0
EU973313_1(EU973313|pid:none) Zea mays clone 396607 acyl-coenzym...   181   2e-69
(P0CZ23) RecName: Full=Acyl-coenzyme A oxidase 3, peroxisomal;  ...   183   5e-66
AF207994_1(AF207994|pid:none) Arabidopsis thaliana acyl-CoA oxid...   183   5e-66
CP002830_2848(CP002830|pid:none) Myxococcus fulvus HW-1, complet...   163   3e-65
CP002349_1344(CP002349|pid:none) Marivirga tractuosa DSM 4126, c...   150   1e-64
CP002271_7116(CP002271|pid:none) Stigmatella aurantiaca DW4/3-1,...   157   7e-63
CP002786_356(CP002786|pid:none) Amycolicicoccus subflavus DQS3-9...   171   7e-63
AP011115_1718(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp...   173   6e-62
AP008957_1663(AP008957|pid:none) Rhodococcus erythropolis PR4 DN...   171   3e-61

Homology VFD158 vs Genome