Dictyostelium discoideum cDNA Clone VFC307

Sequence VFC307

ACTGTTGGCC TACTGGTTCA ATAATGATAA TGAAGNATTT TTCAGNATTC
AATTTATAAA AAGTCAGTAC CAAGNAACTG GTGGATTACT TAAAAATCAA
ACCGTATTCG ATATATTACC ATCAGATGAG AGTAAAGTTG AAACACCACT
TCAAAAATTT CAAAGACTTC AATATGAAGT TATGAGTTTT AGAGAAGAAA
TGCAGGTAAT TGCTGATAAT GGTGGTGAAG TTGAAAAAGA TATTAAAGGT
GTTGATTTAA CACATCAATT AGCAGATTTA CAAAATCAAT TATCACATTT
ATTAGAGAAT GAAAACTTAC AACCAATTTT AGACGAAAAT AAACAAGTAA
TTCATTATTC TCAAATTCAA AATAATTCTT CTAAAAAGCT AATTTCTGAA
ATTGAATCAT TTACACAACA ATCATTATCA TCATCAACAA CTGAACAAAA
TACACAACAA CCATCAAATA ATAATACAAC TACCAATATA ACATCATCAT
CATCAATAAC ACCAAATCAT GTTACTTATG AATTATTTTA TACTGGT---
-------AAA TTAGAAACTG CAACTGGAAA TAAAACTACC GACTCTGTAC
CAATAACTCA ATCAATTTTA GAGATTAAGG AGAAATTATC TTTATTAGAT
ACCACTAAAA TTGATGTTTT ACAACAAAAA ATGAAAACAG TTTCAAAAGA
AATGGAATCA TTAAAAATTC AGGATGAAAC ATCAACAAAA GCATTAACAA
CCAATGAAAA GAAGATTAAT GATATATTTG AAACAATGAA TAAATGGGAT
ATAGTTGGAC AACAAGTACC AGCTATTATA AATAGACTCT ACACTTTGAG
ATCTTTACAT GAAGAGGGTA TCTCATTCTC TAATCATGTT TCAAATTTAG
AAAAACAACA AAACGATATC ACCTCACTTT TAATATCAAA TAGTTCTTTA
ATGAATAAAA TGGATGATTC ATTTAAATCA AACCTTTTAA CAATTAAATC
AAATATTCAA CAATTAGAAT CAAGAATAGA AACATTACAA AATAGACAAC
AACAACAACA ACAATAATGA TAAATAATAA ATAATAATAT GGTTTTTTAN
TTTNCAATNT AAACAAAAAT G

Translated Amino Acid Sequence VFC307

LLAYWFNNDNEXFFXIQFIKSQYQXTGGLLKNQTVFDILPSDESKVETPLQKFQRLQYEV
MSFREEMQVIADNGGEVEKDIKGVDLTHQLADLQNQLSHLLENENLQPILDENKQVIHYS
QIQNNSSKKLISEIESFTQQSLSSSTTEQNTQQPSNNNTTTNITSSSSITPNHVTYELFY
TG---

---KLETATGNKTTDSVPITQSILEIKEKLSLLDTTKIDVLQQKMKTVSKEMESLKIQDE
TSTKALTTNEKKINDIFETMNKWDIVGQQVPAIINRLYTLRSLHEEGISFSNHVSNLEKQ
QNDITSLLISNSSLMNKMDDSFKSNLLTIKSNIQQLESRIETLQNRQQQQQQ***iinnn
mvfxfxx*tkm

Homology VFC307 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFC307 (VFC307Q) /CSM/VF/VFC3-A/VFC307Q.Seq.d/                       1953   0.0
VFM701 (VFM701Q) /CSM/VF/VFM7-A/VFM701Q.Seq.d/                        926   0.0
VFK889 (VFK889Q) /CSM/VF/VFK8-D/VFK889Q.Seq.d/                        926   0.0
VFG435 (VFG435Q) /CSM/VF/VFG4-B/VFG435Q.Seq.d/                        926   0.0
VSF424 (VSF424Q) /CSM/VS/VSF4-A/VSF424Q.Seq.d/                        670   0.0
VSD434 (VSD434Q) /CSM/VS/VSD4-B/VSD434Q.Seq.d/                        670   0.0
SHJ872 (SHJ872Q) /CSM/SH/SHJ8-C/SHJ872Q.Seq.d/                         46   0.001
SHE626 (SHE626Q) /CSM/SH/SHE6-B/SHE626Q.Seq.d/                         44   0.005
CHA311 (CHA311Q) /CSM/CH/CHA3-A/CHA311Q.Seq.d/                         44   0.005
AHM579 (AHM579Q) /CSM/AH/AHM5-D/AHM579Q.Seq.d/                         44   0.005

Homology VFC307 vs DNA

Sequences producing significant alignments:                    (bits)  Value  N


AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 m...    52  2e-07  12
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 m...    42  5e-06  11
AC116977|AC116977.2 Dictyostelium discoideum chromosome 2 m...    38  2e-05  9
AC115588|AC115588.2 Dictyostelium discoideum chromosome 2 m...    44  1e-04  3
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 m...    38  2e-04  12
AC116920|AC116920.2 Dictyostelium discoideum chromosome 2 m...    38  0.005  8
AP004171|AP004171.1 Mycoplasma penetrans genomic DNA, compl...    34  0.006  14
AC084191|AC084191.1 Homo sapiens clone RP11-108L22, LOW-PAS...    42  0.007  3
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 m...    38  0.012  8
AC117176|AC117176.2 Dictyostelium discoideum chromosome 2 m...    34  0.013  11

Homology VFC307 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54N50) RecName: Full=Dynactin subunit 2;                            312   e-148
(Q7T3H1) RecName: Full=Dynactin subunit 2;  &BC053120_1(BC053120...    84   1e-14
(Q6IRB3) RecName: Full=Dynactin subunit 2-B;  &BC070987_1(BC0709...    83   3e-14
BC044069_1(BC044069|pid:none) Xenopus laevis dynactin 2 (p50), m...    83   3e-14
BT045681_1(BT045681|pid:none) Salmo salar clone ssal-rgf-528-282...    82   7e-14
(Q7PZ25) RecName: Full=Probable dynactin subunit 2;                    80   1e-13
AK222693_1(AK222693|pid:none) Homo sapiens mRNA for dynactin 2 v...    74   2e-11
(Q13561) RecName: Full=Dynactin subunit 2; AltName: Full=50 kDa ...    74   2e-11
AK055682_1(AK055682|pid:none) Homo sapiens cDNA FLJ31120 fis, cl...    74   2e-11
CR857355_1(CR857355|pid:none) Pongo abelii mRNA; cDNA DKFZp469P0...    74   2e-11

Homology VFC307 vs Genome