Dictyostelium discoideum cDNA Clone VFB888

Sequence VFB888

CACTGTTGGC CTACTGGACA ATTGTGTGTG TATGTAATAT TAATAAAACG
AAAATGTCGA CACTCTATGA TGTTGTTATC GTTGGTGGTG GTTTAGCAGG
TTTAAATGCT GCCTATCAAT TTAAGAAAGC TGGTTTAAAT GTAATGGTAT
TAGAAGCAAG AGATAGATTT GGTGGTAGAA CAGAGTCAAT TAAAGTTGAA
GATTATTGGT TTGATTTAGG CGGACAATGG ATGGGAGGTA CACATAAATA
TTTAAAAGAA TTATGTGACG AACTTGGAGT TAAATCATTC CCACAATATG
ATGAAGGTAA ACATGTATTA GAGATTAATG GTAAGAAAGT TTATTATCAA
GGTAATATTA GTAATTTAAA TAAGAGTTAT AATTTAGAAG GATTATTCGA
GTCAATTAGC AAGATCGATG ---------- GTGAGAAGCA TTACACTTTA
AATGCACCAG TGCGTTCCAT TATTCAAGAT GCCAATCAAT GTACCATTAA
AACTGATAAC GGTTCAACTT ATCGTTCAAA ATACATTGTT GTTGCAATTC
CACCAACATT GGCTGGCCGT ATTCATTATT CACCATCTAT GCCACCAAGA
CGTGATGAAC TCACTCAAAG AATGCCAATG GGTTCCGTCA TTAAAACCAT
CACCATCTAT GATGAACCAT TCTGGAGAAA AGAAGGTTAT TCAGCTGAAG
CCATCTCTGA TAAAGGTCCA ATCTTTATCT GCTATGATGA CTCTTCACAT
GACGATAAGA AAACAGCTAT CGTTGGTTTC ATTGCTGCTT CAGCCGCTAA
AGATTGGGCT GAAAAATCAC CAGAAGAAAG AAAGAGAGCC GTCTTAGACT
GTTATGCTCG TTGGTGGGGT CCAAAAGCAT TATCTCCAAG AATCTTTTTA
GAGAAAAGTT GGAAAGAAGA AGAATATTCA CGTGGTTGTT ATTTAGGTTA
CACTAGTCCA GGTACTCTCT ACCAATGTGG TGAACATTTA CGTGCTCCAG
TTGGTAGAAT TCATTGGGCT GGTACAGAAA CTGCTTCAGT TTGGATTGGT
TATATGGAAG GTGCCTTAGA ATCAGGTTTT AGAGTTTCAA AAGAAATTAA
AGATAAATTA TTAAATTCAA AATTATAAAT AAATAAATAA ATAATA

Translated Amino Acid Sequence VFB888

LLAYWTIVCVCNINKTKMSTLYDVVIVGGGLAGLNAAYQFKKAGLNVMVLEARDRFGGRT
ESIKVEDYWFDLGGQWMGGTHKYLKELCDELGVKSFPQYDEGKHVLEINGKKVYYQGNIS
NLNKSYNLEGLFESISKID---

---EKHYTLNAPVRSIIQDANQCTIKTDNGSTYRSKYIVVAIPPTLAGRIHYSPSMPPRR
DELTQRMPMGSVIKTITIYDEPFWRKEGYSAEAISDKGPIFICYDDSSHDDKKTAIVGFI
AASAAKDWAEKSPEERKRAVLDCYARWWGPKALSPRIFLEKSWKEEEYSRGCYLGYTSPG
TLYQCGEHLRAPVGRIHWAGTETASVWIGYMEGALESGFRVSKEIKDKLLNSKL*ink*i
i

Homology VFB888 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFB888 (VFB888Q) /CSM/VF/VFB8-D/VFB888Q.Seq.d/                       2097   0.0
VFM824 (VFM824Q) /CSM/VF/VFM8-A/VFM824Q.Seq.d/                       1304   0.0
VFH616 (VFH616Q) /CSM/VF/VFH6-A/VFH616Q.Seq.d/                       1304   0.0
VFG414 (VFG414Q) /CSM/VF/VFG4-A/VFG414Q.Seq.d/                       1304   0.0
SFK548 (SFK548Q) /CSM/SF/SFK5-B/SFK548Q.Seq.d/                       1304   0.0
CFI755 (CFI755Q) /CSM/CF/CFI7-C/CFI755Q.Seq.d/                       1304   0.0
CFI735 (CFI735Q) /CSM/CF/CFI7-B/CFI735Q.Seq.d/                       1304   0.0
CFI683 (CFI683Q) /CSM/CF/CFI6-D/CFI683Q.Seq.d/                       1304   0.0
CFI583 (CFI583Q) /CSM/CF/CFI5-D/CFI583Q.Seq.d/                       1304   0.0
CFI459 (CFI459Q) /CSM/CF/CFI4-C/CFI459Q.Seq.d/                       1304   0.0

Homology VFB888 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ435141) Dictyostelium discoideum cDNA clone:ddv26p06, 3' ...  1302   0.0    1
(BJ434208) Dictyostelium discoideum cDNA clone:ddv16o04, 3' ...  1302   0.0    1
(BJ431186) Dictyostelium discoideum cDNA clone:ddv13l04, 3' ...  1302   0.0    1
(BJ430290) Dictyostelium discoideum cDNA clone:ddv6p17, 3' e...  1302   0.0    1
(BJ429814) Dictyostelium discoideum cDNA clone:ddv4p22, 3' e...  1302   0.0    1
(BJ401197) Dictyostelium discoideum cDNA clone:dds22o11, 3' ...  1302   0.0    1
(BJ375461) Dictyostelium discoideum cDNA clone:ddc18e22, 3' ...  1302   0.0    1
(BJ375460) Dictyostelium discoideum cDNA clone:ddc18e21, 3' ...  1302   0.0    1
(BJ375430) Dictyostelium discoideum cDNA clone:ddc18n13, 3' ...  1302   0.0    1
(BJ375330) Dictyostelium discoideum cDNA clone:ddc18f09, 3' ...  1302   0.0    1

Homology VFB888 vs Protein

Sequences producing significant alignments:                      (bits) Value


AP010948_357(AP010948|pid:none) Azospirillum sp. B510 plasmid pA...   221   6e-56
CP002988_2755(CP002988|pid:none) Halophilic archaeon DL31, compl...   208   5e-52
AP006618_3091(AP006618|pid:none) Nocardia farcinica IFM 10152 DN...   204   8e-51
CP001854_3609(CP001854|pid:none) Conexibacter woesei DSM 14684, ...   203   1e-50
FQ859184_1118(FQ859184|pid:none) Streptomyces cattleya NRRL 8057...   202   4e-50
I51346(I51346) monoamine oxidase - rainbow trout  &L37878_1(L378...   199   2e-49
AY185211_1(AY185211|pid:none) Danio rerio monoamine oxidase mRNA...   197   9e-49
(Q6NSN2) RecName: Full=Amine oxidase [flavin-containing];       ...   197   9e-49
AB047270_1(AB047270|pid:none) Cavia porcellus MAO-A mRNA for put...   194   6e-48
(Q6PLK3) RecName: Full=Amine oxidase [flavin-containing] B;     ...   194   1e-47

Homology VFB888 vs Genome