Dictyostelium discoideum cDNA Clone VFB482

Sequence VFB482

AATTTATTTG TATATTACAT AAAAACACAC ATCATAAGAT GGCAACATAT
AAACCTTAGA ATATTTAGAA CATTTAAAAA AGATTGTACC AGATCTCTCT
GATCAAATCA ATAATATTAA AGATACATAT GAAAATAAAT TATGGCATCA
ACTAACAAAA CAAATTGAAA TGATTATCAT TTCTCCACAA TTATTGGAGA
AAAAAGAGTT ATTTAATTTT TATACAAACT TTATCAGAGA CTTTGAAAAT
AAATTAAGAC CATTAAGTTT AGTTGAAATT TGTATTGCTG TTGCAAGACA
ATTTGATACT GATGAAAGTA GAAAATTCAT TGAAACTATT TCTCAAAAAG
TTAAAAAAGA TAAATCAGCA TACATTTTAA CCTTATCATA TATTGCAAAT
ATGAATTTAC GTTCAGGTGT TGCAGAACAA TTACAAGATT GTAAAAAAAC
ATTAGAATTA GCAAAAGAAG AATTACAAGG AGTCACTGGT TTAGATACAA
TTGTTTATTC TTCATT---- ------TTCT TCATTTNATC GTGTTTCAAC
TGATTATCAT ATGGCAAAGA GTCAAGCAAG TGAATTTTAT AAAAATGCTT
TAATGTACTT ATCATACTGT AAATTAGAAA CAATCTCTCA AGAAGAACAA
GCAAGTCTTG CTTATAATTT ATGTATTGCC GCTTTAGTTG GTGAAAATGT
TTATGGTTTT GGTGATTTAA TTGCAAATCC AATTCTTAAA GCATTAGAAG
GATCACAACA TAATTGGTTA ATTGCATTTT TAAAGGCATT CAATATTGGT
GATATTCAAC AATTTGAAGG ATTAATGTCA CAACATCGTG ATATTATTTC
AACACAAACT GCAATCACAA ATAATATGCA AAAATTAAGA CAAAAGATAT
CGATTCTCTC TTTGTTAGAA TTGGCTTTTA GAACACCATC TGACAAGAGA
TCAATTTCAT TTTCAAAGAT TGCTCAAGCC ACTAAATTAC CATTAGGTGA
GATTGAACAT CTTTTAATGA AATCACTTTC ATTAAATTTG ATCAAAGGTT
CAATCGATCA AACTGTTGAA ATCATTCACA TCACTTGGGT CACTCCAAGA
ATTTTAGATC TTAATCAAAT CAATTCAATG AATAATAGAA TCGCTGAATG
GACTNAAAAA GCAAAAACTT CTTTAAGATT AGTNAAGANA TACTGTNATT
AGTGCTAAAA TTTTNA

Translated Amino Acid Sequence VFB482

iylyit*khts*dgni*TLEYLEHLKKIVPDLSDQINNIKDTYENKLWHQLTKQIEMIII
SPQLLEKKELFNFYTNFIRDFENKLRPLSLVEICIAVARQFDTDESRKFIETISQKVKKD
KSAYILTLSYIANMNLRSGVAEQLQDCKKTLELAKEELQGVTGLDTIVYSS---

---SSFXRVSTDYHMAKSQASEFYKNALMYLSYCKLETISQEEQASLAYNLCIAALVGEN
VYGFGDLIANPILKALEGSQHNWLIAFLKAFNIGDIQQFEGLMSQHRDIISTQTAITNNM
QKLRQKISILSLLELAFRTPSDKRSISFSKIAQATKLPLGEIEHLLMKSLSLNLIKGSID
QTVEIIHITWVTPRILDLNQINSMNNRIAEWTXKAKTSLRLVKXYCX*c*nf

Homology VFB482 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFB482 (VFB482Q) /CSM/VF/VFB4-D/VFB482Q.Seq.d/                       2276   0.0
VFD383 (VFD383Q) /CSM/VF/VFD3-D/VFD383Q.Seq.d/                       1294   0.0
SFE746 (SFE746Q) /CSM/SF/SFE7-B/SFE746Q.Seq.d/                       1294   0.0
VFJ713 (VFJ713Q) /CSM/VF/VFJ7-A/VFJ713Q.Seq.d/                       1269   0.0
SFE355 (SFE355Q) /CSM/SF/SFE3-C/SFE355Q.Seq.d/                       1257   0.0
SLH687 (SLH687Q) /CSM/SL/SLH6-D/SLH687Q.Seq.d/                       1231   0.0
SSK878 (SSK878Q) /CSM/SS/SSK8-D/SSK878Q.Seq.d/                       1195   0.0
VFA629 (VFA629Q) /CSM/VF/VFA6-B/VFA629Q.Seq.d/                       1158   0.0
SFA265 (SFA265Q) /CSM/SF/SFA2-C/SFA265Q.Seq.d/                        969   0.0
AFJ835 (AFJ835Q) /CSM/AF/AFJ8-B/AFJ835Q.Seq.d/                        952   0.0

Homology VFB482 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ429514) Dictyostelium discoideum cDNA clone:ddv3d22, 3' e...  1334   0.0    1
(BJ430585) Dictyostelium discoideum cDNA clone:ddv7f21, 3' e...  1294   0.0    2
(BJ397963) Dictyostelium discoideum cDNA clone:dds10l11, 3' ...  1294   0.0    2
(BJ400304) Dictyostelium discoideum cDNA clone:dds9n13, 3' e...  1257   0.0    1
(C94359) Dictyostelium discoideum slug cDNA, clone SSK878.       1195   0.0    1
(BJ432875) Dictyostelium discoideum cDNA clone:ddv20j03, 3' ...  1195   0.0    2
(BJ429096) Dictyostelium discoideum cDNA clone:ddv2i08, 3' e...  1158   0.0    1
(BJ414690) Dictyostelium discoideum cDNA clone:ddv20j03, 5' ...   835   0.0    3
(AU062123) Dictyostelium discoideum slug cDNA, clone SLH687.      759   0.0    6
(BJ412309) Dictyostelium discoideum cDNA clone:ddv7f21, 5' e...   759   0.0    4

Homology VFB482 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54NQ0) RecName: Full=26S proteasome non-ATPase regulatory subu...   422   0.0
BT097141_1(BT097141|pid:none) Soybean clone JCVI-FLGm-26E5 unkno...   206   3e-72
AK117761_1(AK117761|pid:none) Arabidopsis thaliana At4g19006 mRN...   201   6e-70
BT039217_1(BT039217|pid:none) Zea mays full-length cDNA clone ZM...   195   8e-67
EU964603_1(EU964603|pid:none) Zea mays clone 280258 26S proteaso...   195   2e-66
EU961903_1(EU961903|pid:none) Zea mays clone 238965 26S proteaso...   194   3e-66
BT040556_1(BT040556|pid:none) Zea mays full-length cDNA clone ZM...   194   4e-66
EU974195_1(EU974195|pid:none) Zea mays clone 442631 26S proteaso...   192   3e-65
DQ226994_1(DQ226994|pid:none) Nicotiana benthamiana RPN9 mRNA, p...   196   2e-61
AY223111_1(AY223111|pid:none) Schistosoma japonicum clone ZZD137...   181   7e-59

Homology VFB482 vs Genome