Dictyostelium discoideum cDNA Clone VFA305

Sequence VFA305

ATTTTATCTA TGATTGTACC CATTTACCAT CACCATTAGT TGCCCAAAAG
TACCGTTGTG CCAATCTCTA TGAAGGTCCA ATGGACGATG AATGTGCCGT
CGCCATTCGA AAATGTGACC CAAACGGTCC ATTAATGATG TACGTATCAA
AGATGGTTCC AACCTCTGAT AAAGGTCGTT TCTATGCTTT CGGTCGTGTC
TTCTCAGGTA TCATCCGTAC CGGTCAAAAG GTCAGAATTA TGGGTGTCAA
CTACGTCCCA GGTAAGAAAG ACGATTTATT CTCAAAATCC ATCCAACGTA
CCGTTCTTAT GATGGGTAGA AAGACTGAAC AAATTGAAGA TTGTCCATGT
GGTAACATTG TTGGTTTAGT CGGTGTCGAT CAATTCCTTG TCAAATCTGG
TACCATCACC ACCTCTGAAG TTGCTCACAA CATTCGTGTC ATGAAATTCT
CCGTATCACC AGTCGTCCGT GTTGCCGTCG AACCAAAGAA TCCATCTGAT
TTACCAAAAC TCGTCGAAGG TCTCAAACGT TTAGCCAAAT CCGATCCATG
TGTACTCTGT TACTCTGAAG A--------- -CTNGTCAAT GTCNCCAAAG
GTGTTCAATA TTTGAATGAA ATTAAAGATT CTTTNGTTGG TGCTTTCCAA
TGGGCCACCA AAAGAAGGTG TTGTTTGTGA TGAAAACATG ANAGGTATCC
GTTTCAATCT TTATGATGTC ACCCTCCACA CTGATGCCAT CCACAGAGGT
GGTGGTCAAA TCATCCCAAC TGCTCGTCGT GTACTCTATG CTGCTGAATT
AACTGCCTCC CCAACTNTNT TAGAACCAAT CTACTTAGTA GAAATTACTG
CCCCAGAAAA CGCTATTGGT GGTATTTACT NTGCACTCAA TCGTCGTAGA
GGTATTGTTA TTGGTGAAGA ACGTCGTATC GGTTCCCCAT TATTCTCTGT
CAAAGCTCAT TTACCAGTAT TANAATCCTT CGGTTTCACC GCTGATTTAC
GTTCCCACAC TGCCGGTCAA GCTTTCCCAC AATGTGTCTT CGATCATTGG
GCTTCAATTG GTGTTGTCAA CAAAGATAAG AAAGCCACTG AAGTCGCTTT
AGCCACCAGA AANAGAAAAG GTTTAGCCCC AGAAATCCCA GATCTTACAA
ATTCCACGAA AAACTCTAAA CAATTTAAGT CGCACTTTAG TTTTCAAAAA
AAGGAATCAA ATCNAAAAAA AATTTNAAAA AAAAA

Translated Amino Acid Sequence VFA305

FIYDCTHLPSPLVAQKYRCANLYEGPMDDECAVAIRKCDPNGPLMMYVSKMVPTSDKGRF
YAFGRVFSGIIRTGQKVRIMGVNYVPGKKDDLFSKSIQRTVLMMGRKTEQIEDCPCGNIV
GLVGVDQFLVKSGTITTSEVAHNIRVMKFSVSPVVRVAVEPKNPSDLPKLVEGLKRLAKS
DPCVLCYSE---

---LVNVXKGVQYLNEIKDSXVGAFQWATKRRCCL**khxrypfqsl*chpph*chpqrw
wsnhpncssctlcc*inclpnxxrtnllsrnycprkrywwyllctqss*rycyw*rtsyr
fpiilcqssftsixilrfhr*ftfphcrssfptmclrslgfnwccqqr*esh*srfshqk
xkrfsprnprsykfhekl*ti*val*fskkgikskknxkkk

Homology VFA305 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFA305 (VFA305Q) /CSM/VF/VFA3-A/VFA305Q.Seq.d/                       2256   0.0
VHN377 (VHN377Q) /CSM/VH/VHN3-D/VHN377Q.Seq.d/                       1128   0.0
VHN365 (VHN365Q) /CSM/VH/VHN3-C/VHN365Q.Seq.d/                       1128   0.0
VHN265 (VHN265Q) /CSM/VH/VHN2-C/VHN265Q.Seq.d/                       1128   0.0
VHN226 (VHN226Q) /CSM/VH/VHN2-B/VHN226Q.Seq.d/                       1128   0.0
VHN225 (VHN225Q) /CSM/VH/VHN2-B/VHN225Q.Seq.d/                       1128   0.0
VHN159 (VHN159Q) /CSM/VH/VHN1-C/VHN159Q.Seq.d/                       1128   0.0
VHM826 (VHM826Q) /CSM/VH/VHM8-B/VHM826Q.Seq.d/                       1128   0.0
VHM775 (VHM775Q) /CSM/VH/VHM7-D/VHM775Q.Seq.d/                       1128   0.0
VHM747 (VHM747Q) /CSM/VH/VHM7-B/VHM747Q.Seq.d/                       1128   0.0

Homology VFA305 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ428753) Dictyostelium discoideum cDNA clone:ddv1j01, 3' e...  1164   0.0    1
(BJ410587) Dictyostelium discoideum cDNA clone:ddv1j01, 5' e...  1132   0.0    1
(BJ411175) Dictyostelium discoideum cDNA clone:ddv3e10, 5' e...  1098   0.0    1
(BJ443610) Dictyostelium discoideum cDNA clone:ddv53b16, 3' ...  1011   0.0    2
(BJ436726) Dictyostelium discoideum cDNA clone:ddv32f01, 3' ...  1009   0.0    2
(BJ444918) Dictyostelium discoideum cDNA clone:ddv57j19, 3' ...  1005   0.0    2
(BJ444818) Dictyostelium discoideum cDNA clone:ddv57e15, 3' ...  1005   0.0    2
(BJ444804) Dictyostelium discoideum cDNA clone:ddv57b17, 3' ...  1005   0.0    2
(BJ444799) Dictyostelium discoideum cDNA clone:ddv57a18, 3' ...  1005   0.0    2
(BJ444722) Dictyostelium discoideum cDNA clone:ddv57c08, 3' ...  1005   0.0    2

Homology VFA305 vs Protein

Sequences producing significant alignments:                      (bits) Value


AY310293_1(AY310293|pid:none) Scolopendra viridis voucher Svi el...   307   7e-82
AY305530_1(AY305530|pid:none) Macrobiotus islandicus voucher Mis...   307   7e-82
AY305532_1(AY305532|pid:none) Richtersius coronifer voucher Rco ...   307   7e-82
AY305533_1(AY305533|pid:none) Thulinia sp. JCR-2003 elongation f...   306   1e-81
AY310283_1(AY310283|pid:none) Rhysida nuda voucher Rnu elongatio...   306   2e-81
AK370988_1(AK370988|pid:none) Hordeum vulgare subsp. vulgare mRN...   306   2e-81
AF240828_1(AF240828|pid:none) Scolopendra polymorpha elongation ...   305   2e-81
AY310296_1(AY310296|pid:none) Theatops posticus voucher Tpo elon...   304   6e-81
AY310282_1(AY310282|pid:none) Ribautia sp. 'Rib' elongation fact...   304   7e-81
AY310274_1(AY310274|pid:none) Orthoporus ornata voucher Oor3 elo...   303   2e-80

Homology VFA305 vs Genome