Homology VFA193 vs DNA
Query= VFA193 (VFA193Q) /CSM/VF/VFA1-D/VFA193Q.Seq.d/
(831 letters)
Database: ddbj_A
124,079,491 sequences; 117,728,717,442 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ428960) Dictyostelium discoideum cDNA clone:ddv1i23, 3' e... 781 0.0 1
(BJ428968) Dictyostelium discoideum cDNA clone:ddv1k21, 3' e... 769 0.0 1
(BJ429348) Dictyostelium discoideum cDNA clone:ddv3n04, 3' e... 765 0.0 1
(BJ428976) Dictyostelium discoideum cDNA clone:ddv1m23, 3' e... 753 0.0 1
(BJ436946) Dictyostelium discoideum cDNA clone:ddv32p17, 3' ... 739 0.0 1
(BJ443665) Dictyostelium discoideum cDNA clone:ddv53n17, 3' ... 630 0.0 2
(BJ431817) Dictyostelium discoideum cDNA clone:ddv15n14, 3' ... 729 0.0 1
(BJ430259) Dictyostelium discoideum cDNA clone:ddv6j15, 3' e... 729 0.0 1
(BJ412958) Dictyostelium discoideum cDNA clone:ddv13g18, 5' ... 724 0.0 1
(BJ438892) Dictyostelium discoideum cDNA clone:ddv38e21, 3' ... 718 0.0 1
(BJ431281) Dictyostelium discoideum cDNA clone:ddv13g18, 3' ... 718 0.0 1
(J04472) D.discoideum hisactophilin mRNA, complete cds. 714 0.0 1
(BJ413470) Dictyostelium discoideum cDNA clone:ddv15n14, 5' ... 714 0.0 1
(BJ419284) Dictyostelium discoideum cDNA clone:ddv35i18, 5' ... 712 0.0 1
(BJ412005) Dictyostelium discoideum cDNA clone:ddv6j15, 5' e... 712 0.0 1
(C90692) Dictyostelium discoideum slug cDNA, clone SSJ630. 702 0.0 1
(C90329) Dictyostelium discoideum slug cDNA, clone SSI213. 702 0.0 1
(BJ412684) Dictyostelium discoideum cDNA clone:ddv9a16, 5' e... 700 0.0 1
(BJ410790) Dictyostelium discoideum cDNA clone:ddv1i23, 5' e... 694 0.0 1
(AU269077) Dictyostelium discoideum vegetative cDNA clone:VS... 448 0.0 2
(EF493213) Expression vector pNCO-HISACT-ACVLOV2-syn, comple... 680 0.0 1
(AF544403) Expression vector pNCO113-hisactophilin, complete... 680 0.0 1
(BJ410798) Dictyostelium discoideum cDNA clone:ddv1k21, 5' e... 632 0.0 2
(EF493212) Expression vector pNCO-HISACT-(C49S)-ASLOV1-syn, ... 672 0.0 1
(EF493211) Expression vector pNCO-HISACT-(C49S)-ASLOV2-syn, ... 672 0.0 1
(EF469737) Expression vector pNCO113-hisactophilin-C49S, com... 672 0.0 1
(BJ411148) Dictyostelium discoideum cDNA clone:ddv3n04, 5' e... 634 0.0 2
(AU269270) Dictyostelium discoideum vegetative cDNA clone:VS... 494 e-135 1
(AU074923) Dictyostelium discoideum slug cDNA, clone SSM470. 476 e-130 1
(AU074922) Dictyostelium discoideum slug cDNA, clone SSM464. 476 e-130 1
(AU269269) Dictyostelium discoideum vegetative cDNA clone:VS... 474 e-129 1
(AU270531) Dictyostelium discoideum vegetative cDNA clone:VS... 404 e-108 1
(BJ422216) Dictyostelium discoideum cDNA clone:ddv45a11, 5' ... 268 1e-83 2
(BJ413917) Dictyostelium discoideum cDNA clone:ddv17k12, 5' ... 268 1e-83 2
(BJ424209) Dictyostelium discoideum cDNA clone:ddv51a22, 5' ... 268 1e-83 2
(BJ412561) Dictyostelium discoideum cDNA clone:ddv9e01, 5' e... 268 1e-83 2
(BJ432032) Dictyostelium discoideum cDNA clone:ddv17k12, 3' ... 268 1e-83 2
(BJ420789) Dictyostelium discoideum cDNA clone:ddv40o08, 5' ... 268 2e-82 2
(U13671) Dictyostelium discoideum hisactophilin II (hsII) mR... 268 2e-79 2
(BJ440957) Dictyostelium discoideum cDNA clone:ddv45a11, 3' ... 256 7e-79 2
(AU270299) Dictyostelium discoideum vegetative cDNA clone:VS... 301 3e-77 1
(AU270298) Dictyostelium discoideum vegetative cDNA clone:VS... 301 3e-77 1
(AU261737) Dictyostelium discoideum vegetative cDNA clone:VS... 268 3e-71 2
(BJ439432) Dictyostelium discoideum cDNA clone:ddv40o08, 3' ... 230 3e-71 2
(C89705) Dictyostelium discoideum slug cDNA, clone SSG165. 268 5e-70 2
(AU037149) Dictyostelium discoideum slug cDNA, clone SSB534. 256 1e-67 2
(BJ435746) Dictyostelium discoideum cDNA clone:ddv28n02, 3' ... 210 7e-63 2
(AU270287) Dictyostelium discoideum vegetative cDNA clone:VS... 157 9e-34 1
(AU270286) Dictyostelium discoideum vegetative cDNA clone:VS... 157 9e-34 1
(BJ430990) Dictyostelium discoideum cDNA clone:ddv9a16, 3' e... 149 2e-31 1
(GR587625) CCAB2651.b1 CCAB Dictyostelium purpureum 0 hr sta... 96 7e-21 2
(EJ062144) 1095458003059 Global-Ocean-Sampling_GS-26-01-01-1... 32 2e-04 4
(EJ774675) 1092985200145 Global-Ocean-Sampling_GS-30-02-01-1... 32 3e-04 4
(EJ768179) 1092963336413 Global-Ocean-Sampling_GS-30-02-01-1... 32 5e-04 4
(EJ677187) 1092955092876 Global-Ocean-Sampling_GS-30-02-01-1... 34 0.004 4
(EJ664190) 1092955035518 Global-Ocean-Sampling_GS-30-02-01-1... 34 0.005 4
(EJ586180) 1092961018409 Global-Ocean-Sampling_GS-29-01-01-1... 32 0.023 4
(EJ488195) 1095403517176 Global-Ocean-Sampling_GS-28-01-01-1... 32 0.028 4
(EK000273) 1093025037960 Global-Ocean-Sampling_GS-30-02-01-1... 32 0.040 4
(EK001554) 1093025456867 Global-Ocean-Sampling_GS-30-02-01-1... 32 0.057 4
(EJ746093) 1092962061633 Global-Ocean-Sampling_GS-30-02-01-1... 34 0.073 4
(DU754277) ASNF3799.g2 HF130_10-06-02 uncultured marine micr... 34 0.085 3
(EI709831) IGBR11H01TR BAC library from the recurrent gliobl... 30 0.088 4
(EJ772095) 1092970403764 Global-Ocean-Sampling_GS-30-02-01-1... 34 0.17 4
(EJ384889) 1092963798561 Global-Ocean-Sampling_GS-28-01-01-1... 34 0.18 3
(BJ390912) Dictyostelium discoideum cDNA clone:dds14a09, 5' ... 34 0.21 3
(BJ416810) Dictyostelium discoideum cDNA clone:ddv27l07, 5' ... 34 0.21 3
(C84749) Dictyostelium discoideum slug cDNA, clone SSF224. 34 0.23 3
(BX957363) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 0.30 4
(AC176752) Strongylocentrotus purpuratus clone R3-3097K1, WO... 34 0.34 6
(EJ044724) 1095454113515 Global-Ocean-Sampling_GS-26-01-01-1... 30 0.62 4
(EK054576) 1092960004367 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.63 1
(AF238886) Bacillus cereus strain ATCC 11778 putative VrrB (... 34 0.84 3
(BJ435522) Dictyostelium discoideum cDNA clone:ddv27l07, 3' ... 36 0.98 2
(BJ400665) Dictyostelium discoideum cDNA clone:dds14a09, 3' ... 36 1.1 2
(EE274737) PMAO-aac70b08.b1 Lamprey_EST_Embryo Petromyzon ma... 32 1.2 3
(FF116391) CJAH-aaa91e09.b1 Caenorhabditis_japonica_CJAH1_ES... 32 1.3 3
(FF135954) CJAH-aae62b06.b1 Caenorhabditis_japonica_CJAH1_ES... 32 1.4 3
(CW189915) 104_611_11174219_148_36746_042 Sorghum methylatio... 36 1.4 2
(DQ497166) Bacillus anthracis VNTR marker locus vrrB1 sequence. 34 2.3 2
(CR354544) Zebrafish DNA sequence from clone CH211-273A21 in... 46 2.5 1
(FV536163) Modified Microbial Nucleic Acid. 46 2.5 1
(FV536162) Modified Microbial Nucleic Acid. 46 2.5 1
(CU462846) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 46 2.5 1
(ET797086) CHO_OF671xe11r1.ab1 CHO_OF Nicotiana tabacum geno... 46 2.5 1
(ET797034) CHO_OF671xe11f1.ab1 CHO_OF Nicotiana tabacum geno... 46 2.5 1
(DE980512) Macropus eugenii DNA, BAC clone: MEB1-189A22_R, 3... 46 2.5 1
(BX548244) Zebrafish DNA sequence from clone CH211-220I15 in... 38 2.6 2
(AF238890) Bacillus anthracis isolate MOZ-3 VrrB (vrrB) gene... 34 2.7 2
(AF238891) Bacillus anthracis isolate A46 VrrB (vrrB) gene, ... 34 2.8 2
(AF238892) Bacillus anthracis isolate BA0015 VrrB (vrrB) gen... 34 2.9 2
(AF238894) Bacillus anthracis isolate A24 VrrB (vrrB) gene, ... 34 3.0 2
(AF238893) Bacillus anthracis isolate VOLLUM VrrB (vrrB) gen... 34 3.0 2
(BV577178) G591P614771FE3.T0 Clint Pan troglodytes verus STS... 32 3.0 3
(AF238895) Bacillus anthracis isolate Zim69 VrrB (vrrB) gene... 34 3.0 2
(AF238897) Bacillus anthracis isolate J611 VrrB (vrrB) gene,... 34 3.1 2
(AF238896) Bacillus anthracis isolate BA1015 VrrB (vrrB) gen... 34 3.1 2
(EJ719025) 1092959441149 Global-Ocean-Sampling_GS-30-02-01-1... 32 3.1 3
(AF238898) Bacillus anthracis isolate 109 VrrB (vrrB) gene, ... 34 3.3 2
(AF238899) Bacillus anthracis isolate BA1035 VrrB (vrrB) gen... 34 3.3 2
(EJ727278) 1092959551366 Global-Ocean-Sampling_GS-30-02-01-1... 32 3.7 3
(FV536367) Modified Microbial Nucleic Acid. 34 4.0 2
(FV536366) Modified Microbial Nucleic Acid. 34 4.0 2
(AC026097) Homo sapiens chromosome 5 clone RP11-732J8, WORKI... 40 4.1 2
(AZ850222) 2M0152D06F Mouse 10kb plasmid UUGC1M library Mus ... 30 4.4 3
(AL928995) Zebrafish DNA sequence from clone CH211-215M21 in... 38 5.1 2
(AZ192647) SP_1022_A1_A07_T7A Strongylocentrotus purpuratus,... 34 5.3 3
(EF410582) Synthetic construct Bacillus anthracis clone FLH2... 34 6.0 2
(CX557989) yda43g07.y2 Sea urchin EST Lib1 Strongylocentrotu... 34 6.1 3
(ER633591) 1093018554385 Global-Ocean-Sampling_GS-36-01-01-2... 28 6.3 4
(DE154079) Bombyx mori genomic DNA, Fosmid clone:RO0296-E02_R. 34 6.3 2
(BZ161294) CH230-327P12.TJ CHORI-230 Segment 2 Rattus norveg... 42 6.5 2
(EK475119) 1095469477197 Global-Ocean-Sampling_GS-32-01-01-1... 32 8.1 3
(AY392441) Dictyostelium discoideum possible blackjack gene,... 36 8.3 2
(ER288066) 1092343582821 Global-Ocean-Sampling_GS-34-01-01-1... 34 9.6 3
(CR354554) Zebrafish DNA sequence from clone CH211-207B16 in... 44 9.8 1
(U95973) Arabidopsis thaliana chromosome 1 BAC T19D16 genomi... 44 9.8 1
(AF482951) Gossypium hirsutum Acala carbonic anhydrase (CAH2... 44 9.8 1
(FV536135) Modified Microbial Nucleic Acid. 44 9.8 1
(FV536134) Modified Microbial Nucleic Acid. 44 9.8 1
(FV536025) Modified Microbial Nucleic Acid. 44 9.8 1
(FV536024) Modified Microbial Nucleic Acid. 44 9.8 1
(AC188907) Aotus nancymaae clone CH258-336F20, WORKING DRAFT... 44 9.8 1
(FH674768) CHO_OF5041xa13r1.ab1 CHO_OF5 Nicotiana tabacum ge... 44 9.8 1
(ET647014) JBVRH59TR JBVR Allium cepa genomic clone JBVRG_RH... 44 9.8 1
(EI678568) SB_BBd02-L16.F SB_BBd Sorghum bicolor genomic 5',... 44 9.8 1
(CZ953346) 269943 Tomato EcoRI BAC Library Solanum lycopersi... 44 9.8 1
(CT313681) Sus scrofa genomic clone CH242-344O9, genomic sur... 44 9.8 1
(CX422095) JGI_XZG62761.rev NIH_XGC_tropGas7 Xenopus (Silura... 44 9.8 1
(CP000743) Methanococcus aeolicus Nankai-3, complete genome. 44 9.8 1
>(BJ428960) Dictyostelium discoideum cDNA clone:ddv1i23, 3' end, single read.
Length = 400
Score = 781 bits (394), Expect = 0.0
Identities = 400/400 (100%)
Strand = Plus / Minus
Query: 432 aaattaataatcaaattgaattaataatataaatacaatgggtaacagagcattcaaatc 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 aaattaataatcaaattgaattaataatataaatacaatgggtaacagagcattcaaatc 341
Query: 492 acatcacggtcactttttaagcgctgaaggcgaagctgtaaagactcaccacggtcatca 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 acatcacggtcactttttaagcgctgaaggcgaagctgtaaagactcaccacggtcatca 281
Query: 552 tgatcatcacacccatttccacgttgaaaaccatggtggtaaagttgcattaaagaccca 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tgatcatcacacccatttccacgttgaaaaccatggtggtaaagttgcattaaagaccca 221
Query: 612 ttgcggtaaatacctttcaattggtgatcataaacaagtttacctctcacaccacttaca 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ttgcggtaaatacctttcaattggtgatcataaacaagtttacctctcacaccacttaca 161
Query: 672 cggtgaccactcactcttccacttagaacatcatggcggtaaagtctcaatcaaaggtca 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 cggtgaccactcactcttccacttagaacatcatggcggtaaagtctcaatcaaaggtca 101
Query: 732 tcaccaccactacatttccgcntatcatcatggtcatgtttcaaccaaagaacaccacga 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 tcaccaccactacatttccgcntatcatcatggtcatgtttcaaccaaagaacaccacga 41
Query: 792 tcacgacaccaccttnaagaaatatatttaacaattttta 831
||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 tcacgacaccaccttnaagaaatatatttaacaattttta 1
Score = 670 bits (338), Expect = 0.0
Identities = 343/345 (99%)
Strand = Plus / Minus
Query: 1 aaatacaatgggtaacagagcattcaaatcacatcacggtcactttttaagcgctgaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaatacaatgggtaacagagcattcaaatcacatcacggtcactttttaagcgctgaagg 311
Query: 61 cgaagctgtaaagactcaccacggtcatcatgatcatcacacccatttccacgttgaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 cgaagctgtaaagactcaccacggtcatcatgatcatcacacccatttccacgttgaaaa 251
Query: 121 ccatggtggtaaagttgcattaaagacccattgcggtaaatacctttcaattggtgatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ccatggtggtaaagttgcattaaagacccattgcggtaaatacctttcaattggtgatca 191
Query: 181 taaacaagtttacctctcacaccacttacacggtgaccactcactcttccacttagaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 taaacaagtttacctctcacaccacttacacggtgaccactcactcttccacttagaaca 131
Query: 241 tcatggcggtaaagtctcaatcaaaggtcatcaccaccactacatttccgctgatcatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 130 tcatggcggtaaagtctcaatcaaaggtcatcaccaccactacatttccgcntatcatca 71
Query: 301 tggtcatgtttcaaccaaagaacaccacgatcacgacaccacctt 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tggtcatgtttcaaccaaagaacaccacgatcacgacaccacctt 26
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 124079491
Number of Hits to DB: 898,572,722
Number of extensions: 49772839
Number of successful extensions: 3865480
Number of sequences better than 10.0: 132
Length of query: 831
Length of database: 117,728,717,442
Length adjustment: 24
Effective length of query: 807
Effective length of database: 114,750,809,658
Effective search space: 92603903394006
Effective search space used: 92603903394006
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home