Dictyostelium discoideum cDNA Clone VFA169

Sequence VFA169

AAAGAAACTA TCCCAATGTT TGATGATGGT CTTCATGATG ATGAACAAGC
AAATGATGGT CTTTTCGGTG GTTACATCAA TGTAAGTGAA TTGGGTAATT
ATGACCTTCA AGTAGTTTAC AAAGGTTCTC AAAATGGTAA TGGTGTAATT
CGTTCAAATC AACATCTCAT TCCAATAACT TCTCAATATT TAGAATTAAC
TGGTGAAGTT CAATCAGTTC AAGATGGTGA TGCAAATTTA AATATCTATT
TCATTGTCAA TAGTCCAAAC CAAACCACTG TTGATCAAAC ACCAGTACAT
GTTTATTCAG AAGTTTATGG TACTGATGAT GATGGTAAAA AAGTTGCAAT
TGCTTGGGTT GCCGGTGTTA CATCAGCTCA ACCAATTCAA GGTTCAACCA
CTACTTTTGC ACTCTCTGCA GTTCTTAATG AACGTTGGAT CGCCAAAGTT
GGTGCAACCG CTCCATTCTT TGTAAAGAAT GTTCAAGTCT CTGATTTGGA
TACTTTTATT CCACTTTCAA ATACAACATC AACATCAAAT GTTAAAATGG
TTGGTGAATA TAAAGATGTT CGTACAATTG TTCATTCTCC ACCACTTCAT
GAAATCA--- -------CGT ATTGGTAAAT CAACTGGTAA TGGTAAATTA
ATTCTTACAC ATGGTTATTG TAGTGAAAGG TGTTTGGCCA ATTGAGGATT
TTGAAAATTC TGTAGAGTTC CAAGATTTTA ATCAAAATCG TGGTAATGAT
GAATTTGCTC AAATACTTGC CAATTTCGGT AGCCAATATA CCGATGGTTT
TTCACTTGTT GCTCATAGTC AAGGTGGTAA CGCTGCTCTT CACCTCGTAA
CATTCTATTT CAGTGGACTT GATCTTTCTC AAAAACTTGA AGGTCGTGTC
ATTCAATCAA TGGGTACTCC ATACCAAGGT ACTGCTCTCG CTGGTACTTG
GGCTTCTATT GGTAGTGCTG TAGGTGTTGG TTGTTCTGCA AATGATGATC
TCACTGTTGA TGGTGCCGCT TTATGGTTAA AATCAATTCC AGCAGATAAA
AGAGCTTTAG TTTATTATAC AACTACTCAA TATAGTACTG GTTCTTTAAT
TAATTATTGT AATTTGGCTT CCAATGCAGT CTTAGAATGG CCAAATGATG
GTGTTGTTGA TAATGAGCAT ACTCCACTCG AAGGTGGTGT ATATTTAAAT
AACTTTAAAG ACTGGTGTCA CTCTGATGGT ATGCACTCAC CACAACAAAC
TACAAATACT NAATATAACA AAGAAATGAG TTCCAACTCT GTTGGTAAAC
TACTTNNATA TTTTTTTTTC TCTACA

Translated Amino Acid Sequence VFA169

KETIPMFDDGLHDDEQANDGLFGGYINVSELGNYDLQVVYKGSQNGNGVIRSNQHLIPIT
SQYLELTGEVQSVQDGDANLNIYFIVNSPNQTTVDQTPVHVYSEVYGTDDDGKKVAIAWV
AGVTSAQPIQGSTTTFALSAVLNERWIAKVGATAPFFVKNVQVSDLDTFIPLSNTTSTSN
VKMVGEYKDVRTIVHSPPLHEI---

---RIGKSTGNGKLILTHGYCSERCLAN*gf*kfcrvprf*sksw***icsntcqfr*pi
yrwfftccs*srw*rcssprnilfqwt*sfskt*rschsingysiprycsrwylgfyw*c
crcwlfck**shc*wcrfmvkinssr*ksfsllynysi*ywffn*ll*fgfqcslrmak*
wcc***aystrrwcifk*l*rlvsl*wyaltttnykyxi*qrnefqlcw*ttxifffly

Homology VFA169 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFA169 (VFA169Q) /CSM/VF/VFA1-C/VFA169Q.Seq.d/                       2522   0.0
VHL113 (VHL113Q) /CSM/VH/VHL1-A/VHL113Q.Seq.d/                       1342   0.0
VHM588 (VHM588Q) /CSM/VH/VHM5-D/VHM588Q.Seq.d/                       1336   0.0
VHM845 (VHM845Q) /CSM/VH/VHM8-B/VHM845Q.Seq.d/                       1334   0.0
VHQ437 (VHQ437Q) /CSM/VH/VHQ4-B/VHQ437Q.Seq.d/                       1328   0.0
VHQ285 (VHQ285Q) /CSM/VH/VHQ2-D/VHQ285Q.Seq.d/                       1328   0.0
VHP671 (VHP671Q) /CSM/VH/VHP6-C/VHP671Q.Seq.d/                       1328   0.0
VHP574 (VHP574Q) /CSM/VH/VHP5-D/VHP574Q.Seq.d/                       1328   0.0
VHP509 (VHP509Q) /CSM/VH/VHP5-A/VHP509Q.Seq.d/                       1328   0.0
VHO841 (VHO841Q) /CSM/VH/VHO8-B/VHO841Q.Seq.d/                       1328   0.0

Homology VFA169 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ428894) Dictyostelium discoideum cDNA clone:ddv1i17, 3' e...  1358   0.0    1
(BJ444789) Dictyostelium discoideum cDNA clone:ddv57p08, 3' ...  1241   0.0    2
(BJ444111) Dictyostelium discoideum cDNA clone:ddv55d11, 3' ...  1241   0.0    2
(BJ443497) Dictyostelium discoideum cDNA clone:ddv53i03, 3' ...  1241   0.0    2
(BJ444620) Dictyostelium discoideum cDNA clone:ddv56o21, 3' ...  1235   0.0    2
(BJ444437) Dictyostelium discoideum cDNA clone:ddv56j12, 3' ...  1233   0.0    2
(BJ444841) Dictyostelium discoideum cDNA clone:ddv57i17, 3' ...  1231   0.0    2
(BJ444665) Dictyostelium discoideum cDNA clone:ddv57h05, 3' ...  1227   0.0    2
(BJ444561) Dictyostelium discoideum cDNA clone:ddv56c22, 3' ...  1227   0.0    2
(BJ428943) Dictyostelium discoideum cDNA clone:ddv1e19, 3' e...  1227   0.0    2

Homology VFA169 vs Protein

Sequences producing significant alignments:                      (bits) Value


AM920689_339(AM920689|pid:none) Xanthomonas campestris pv. campe...   275   6e-72
CP000050_316(CP000050|pid:none) Xanthomonas campestris pv. campe...   272   3e-71
CP002789_4122(CP002789|pid:none) Xanthomonas campestris pv. raph...   271   5e-71
AE008922_313(AE008922|pid:none) Xanthomonas campestris pv. campe...   271   6e-71
AM039952_339(AM039952|pid:none) Xanthomonas campestris pv. vesic...   267   1e-69
AE008384_2478(AE008384|pid:none) Methanosarcina mazei strain Goe...    45   0.009
CP000937_1732(CP000937|pid:none) Francisella philomiragia subsp....    42   0.061
CP002557_900(CP002557|pid:none) Francisella cf. novicida Fx1, co...    40   0.23
CP002872_1381(CP002872|pid:none) Francisella sp. TX077308, compl...    39   0.52
CP002558_904(CP002558|pid:none) Francisella cf. novicida 3523, c...    39   0.88

Homology VFA169 vs Genome