Dictyostelium discoideum cDNA Clone SSM489

Size:		1.5k
3' sequence:	TS980311
5' sequence:	TS980909
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSM489

TATAAATTCA AACGCGCAAA AAAAAAAAAA AAAACACATT AATTGTAACA
GAATTTAACA TATTATTTTT TTTTCAGTTT TCATAAATTA AAGAAGAAAA
AATAAAAAAA GAAGAAAAGA CTTGATTAGA AAGAGAAGTT TGTGGTAGTA
ATAATAATAG TAATAACAAC CAATAACGAA AATTTAAATA TATAAAATAT
ATTTAAAATA AACAAAACAA AACAAAACAA AAACAAAAAA AAATAAAAAG
AGAAGAAAAT AAATAAAATA AAATAATATA AATAAAAAAG AATGGAAATT
GATTTAGATT CAATCATTAC AAGATTATTG GAACCAAGAA CTACAAAACC
AGGTAAATTA GTTGATTTAG CAGAGGAGGA AATTAGATAT TTAACAGTTC
AAGCCACTGA AATCTTTATA AATCAACCAA TTTTATTGGA ATTAGAAGCA
CCAATCAAGA TCTGTGGTGA TATTCATGGA CAATACTACG ATTTACTTCG
TCTCTTTGAG TACGGAGGAT TCCCACCACA AAGTAATTAT CTTTTTTTAG
GTGATTATGT CGATCGTGGT AAGCAATCCT TAGAGACCAT TTGTTTATTG
TTGGGCTATA AAATCAAATA TCCAGAGG-- --------TC TTTTGTATGC
ATGGTGGTCT CTCACCAGAT CTCAAGAATA TGGATCAAAT TCGTAGAATC
ACTAGACCAA CCGTTGTTCC AGATTTTGGT CTTTTATGTG ATCTCTTGTG
GGCTGATCCT GATAAAAACA TTCAAGGTTG GGAAGATAAT GACCGTGGTG
TCTCCTATAC TTTTGGTGCC GACGTTGTCG AATCATTCTT AAAGAAACAC
GATCTCGATT TAGTTTGTAG AGCTCATCAA GTTGTAGAAG ATGGTTATGA
ATTCTTTGCT AAACGTCAAT TGGTAACCCT CTTTTCCGCT CCAAATTACT
TTGGTGAATT TGATAACGCT GGTGCTATGA TGGGTGTCGA TGAAACTTTA
ATGTGTTCAT TCCAAATTTT AAAACCTGCC GATAAAAAAA AACTTACAAA
CGATAGTAAT GGTAGACCAT TAACTCCTCC AAGAAATAAA CAACAAAAAC
CAAAAAAATA AATTAAAATA ACTACTTTTT TTAAAAAAAA AAAAAAAAAT
AAATAAAATC TCAACCACAC AACACATATC AGTCAAACTT TAAAGTCAAC
CAATTACTTT TAAAA

Translated Amino Acid Sequence SSM489

ykfkrakkkkkth*l*qnltyyfffsfhklkkkk*kkkkrld*kekfvvviiivittnne
nlni*nifkinktkqnknkkk*kekkinkik*yk*KRMEIDLDSIITRLLEPRTTKPGKL
VDLAEEEIRYLTVQATEIFINQPILLELEAPIKICGDIHGQYYDLLRLFEYGGFPPQSNY
LFLGDYVDRGKQSLETICLLLGYKIKYPE---

---FCMHGGLSPDLKNMDQIRRITRPTVVPDFGLLCDLLWADPDKNIQGWEDNDRGVSYT
FGADVVESFLKKHDLDLVCRAHQVVEDGYEFFAKRQLVTLFSAPNYFGEFDNAGAMMGVD
ETLMCSFQILKPADKKKLTNDSNGRPLTPPRNKQQKPKK*ikittffkkkkknk*nlnht
thisqtlkstnyf*

Homology SSM489 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSM489 (SSM489Q) /CSM/SS/SSM4-D/SSM489Q.Seq.d/                       1419   0.0
SSK832 (SSK832Q) /CSM/SS/SSK8-B/SSK832Q.Seq.d/                        829   0.0
SLD102 (SLD102Q) /CSM/SL/SLD1-A/SLD102Q.Seq.d/                        829   0.0
SLC140 (SLC140Q) /CSM/SL/SLC1-B/SLC140Q.Seq.d/                        829   0.0
SLA467 (SLA467Q) /CSM/SL/SLA4-C/SLA467Q.Seq.d/                        829   0.0
SLI710 (SLI710Q) /CSM/SL/SLI7-A/SLI710Q.Seq.d/                        821   0.0
SLE630 (SLE630Q) /CSM/SL/SLE6-B/SLE630Q.Seq.d/                        813   0.0
SSM353 (SSM353Q) /CSM/SS/SSM3-C/SSM353Q.Seq.d/                        684   0.0
AFC805 (AFC805Q) /CSM/AF/AFC8-A/AFC805Q.Seq.d/                        684   0.0
AFL810 (AFL810Q) /CSM/AF/AFL8-A/AFL810Q.Seq.d/                        682   0.0

Homology SSM489 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AF465313) Dictyostelium discoideum ABC transporter ABCA.11 ...   783   0.0    7
(AF020537) Dictyostelium discoideum protein phosphatase type...   783   0.0    5
(AU039182) Dictyostelium discoideum slug cDNA, clone SSM489.      783   0.0    3
(C25572) Dictyostelium discoideum slug cDNA, clone SLA467.        783   0.0    5
(AU034173) Dictyostelium discoideum slug cDNA, clone SLC140.      783   0.0    2
(C94319) Dictyostelium discoideum slug cDNA, clone SSK832.        783   0.0    2
(AU052293) Dictyostelium discoideum slug cDNA, clone SLD102.      783   0.0    2
(AU053465) Dictyostelium discoideum slug cDNA, clone SLI710.      775   0.0    2
(CO965133) BeE60N03B08 BeE60N Blastocladiella emersonii cDNA...   767   0.0    2
(AU034877) Dictyostelium discoideum slug cDNA, clone SLE630.      714   0.0    3

Homology SSM489 vs Protein

Sequences producing significant alignments:                      (bits) Value


Y00701_1(Y00701|pid:none) Rabbit mRNA for protein phosphatase-1 ...   251   5e-65
X07798_1(X07798|pid:none) Rabbit mRNA for type-1 protein phospha...   251   5e-65
BT043647_1(BT043647|pid:none) Salmo salar clone HM5_0904 protein...   251   7e-65
(Q8WMS6) RecName: Full=Serine/threonine-protein phosphatase PP1-...   251   7e-65
AK158681_1(AK158681|pid:none) Mus musculus visual cortex cDNA, R...   251   7e-65
AB464100_1(AB464100|pid:none) Synthetic construct DNA, clone: pF...   251   7e-65
A46240(A46240;A32729;JN0723;S29985) phosphoprotein phosphatase (...   251   7e-65
BC045444_1(BC045444|pid:none) Danio rerio zgc:76940, mRNA (cDNA ...   250   9e-65
DQ364569_1(DQ364569|pid:none) Scophthalmus maximus protein phosp...   250   9e-65
AK353885_1(AK353885|pid:none) Hordeum vulgare subsp. vulgare mRN...   250   9e-65

Homology SSM489 vs Genome