Dictyostelium discoideum cDNA Clone SSM483

Size:		1.2k
3' sequence:	TS980311
5' sequence:	*
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSM483

---------- AGCAATGATG ACAATGTACC ACTAGTACCA CCACTATTTT
ATTTAAAGGT ATAATGTCAA TTTCAGATAT ACCAAGAGAT GATTCAAAAA
GAGCAATAAA GAAATTAAAA TCAATGGGAT TAAAATGTTA CATGGTAACA
GGTGATAATA AAAGAGCAGC TAAATTCATT GCAAATCAAG TTGGCATTGA
TGAAGATCAT ATCTATTCAG AGGTTATACC AAAAGAGAAA GCAGAGAAAG
TTTCAGATTT ACAAGCTAGT GGTAATGTAG TTTGTTTCGT TGGTGATGGT
GTTAATGATT CACCTGCATT GTCACAAGCT GATGTTGGTA TTTCAGTTGC
AACTGGTACT GATATCGCTA TTGAATCATC TTCAATCGTT TTATTGAAAA
ATTCACTCAC TGATGTTTAT CGTTCAATTC ATTTATCGAG AGTAGTTTTC
CGTAGAATTA AAATTAATTT CACATTAGCT TTAATCTATA ATCTTTGTGC
TGTTCCACTA GCCGCTGGTT TATTTAGAGT AATCTTTGGT GTGTCTTTAC
CACCAATGGC TGCTGCTGCT GCAATGGTAG TTTCTTCATT ATCAGTTTTA
TCTTCTTCAT TATTATTAAA ACTTTATTCT TCACCCAAAT T

Translated Amino Acid Sequence SSM483

---q**QCTTSTTTILFKGIMSISDIPRDDSKRAIKKLKSMGLKCYMVTGDNKRAAKFIA
NQVGIDEDHIYSEVIPKEKAEKVSDLQASGNVVCFVGDGVNDSPALSQADVGISVATGTD
IAIESSSIVLLKNSLTDVYRSIHLSRVVFRRIKINFTLALIYNLCAVPLAAGLFRVIFGV
SLPPMAAAAAMVVSSLSVLSSSLLLKLYSSPK

Homology SSM483 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSM483 (SSM483Q) /CSM/SS/SSM4-D/SSM483Q.Seq.d/                       1251   0.0
SSC204 (SSC204Q) /CSM/SS/SSC2-A/SSC204Q.Seq.d/                       1207   0.0
SHA773 (SHA773Q) /CSM/SH/SHA7-D/SHA773Q.Seq.d/                       1199   0.0
SSL788 (SSL788Q) /CSM/SS/SSL7-D/SSL788Q.Seq.d/                       1140   0.0
CHO653 (CHO653Q) /CSM/CH/CHO6-C/CHO653Q.Seq.d/                       1104   0.0
SSI134 (SSI134Q) /CSM/SS/SSI1-B/SSI134Q.Seq.d/                        981   0.0
SSJ731 (SSJ731Q) /CSM/SS/SSJ7-B/SSJ731Q.Seq.d/                        547   e-155
SSG280 (SSG280Q) /CSM/SS/SSG2-D/SSG280Q.Seq.d/                        389   e-107
SLB248 (SLB248Q) /CSM/SL/SLB2-B/SLB248Q.Seq.d/                         46   7e-04
SLH207 (SLH207Q) /CSM/SL/SLH2-A/SLH207Q.Seq.d/                         40   0.040

Homology SSM483 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU039179) Dictyostelium discoideum slug cDNA, clone SSM483.     1251   0.0    1
(C84001) Dictyostelium discoideum slug cDNA, clone SSC204.       1207   0.0    1
(BJ403624) Dictyostelium discoideum cDNA clone:dds25b19, 3' ...  1181   0.0    2
(C93851) Dictyostelium discoideum slug cDNA, clone SSL788.        523   0.0    4
(BJ385038) Dictyostelium discoideum cDNA clone:ddc51i14, 3' ...   961   0.0    6
(C90138) Dictyostelium discoideum slug cDNA, clone SSI134.        981   0.0    1
(C91270) Dictyostelium discoideum slug cDNA, clone SSJ731.        547   e-151  1
(AU073160) Dictyostelium discoideum slug cDNA, clone SSG280.      389   e-103  1
(GR567037) CBTF2789.g1 CBTF Dictyostelium purpureum 12 hr ve...    44   9e-06  2
(GR580169) CBZY2601.g1 CBZY Dictyostelium purpureum 18 hr st...    44   9e-06  2

Homology SSM483 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC116984_190(AC116984|pid:none) Dictyostelium discoideum chromos...   321   2e-86
CP002464_1756(CP002464|pid:none) Lactobacillus johnsonii DPC 602...   170   6e-41
(Q64446) RecName: Full=Copper-transporting ATPase 2;          EC...   168   2e-40
U38477_1(U38477|pid:none) Mus musculus copper-transporting ATPas...   168   2e-40
AB017791_1(AB017791|pid:none) Rattus norvegicus mRNA for ATPase ...   168   2e-40
AL590619_2(AL590619|pid:none) Mouse DNA sequence from clone RP23...   168   2e-40
CP001685_565(CP001685|pid:none) Leptotrichia buccalis DSM 1135, ...   167   3e-40
CP000517_1601(CP000517|pid:none) Lactobacillus helveticus DPC 45...   167   3e-40
AP007281_425(AP007281|pid:none) Lactobacillus reuteri JCM 1112 D...   167   3e-40
BC143973_1(BC143973|pid:none) Homo sapiens ATPase, Cu++ transpor...   167   5e-40

Homology SSM483 vs Genome