Homology SSM454 vs DNA
Query= SSM454 (SSM454Q) /CSM/SS/SSM4-C/SSM454Q.Seq.d/
(604 letters)
Database: ddbj_A
124,079,491 sequences; 117,728,717,442 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU039155) Dictyostelium discoideum slug cDNA, clone SSM454. 938 0.0 1
(AU262816) Dictyostelium discoideum vegetative cDNA clone:VS... 936 0.0 1
(AU038237) Dictyostelium discoideum slug cDNA, clone SSH454. 936 0.0 1
(C92816) Dictyostelium discoideum slug cDNA, clone SSF379. 936 0.0 1
(C92403) Dictyostelium discoideum slug cDNA, clone SSE766. 936 0.0 1
(C90262) Dictyostelium discoideum slug cDNA, clone SSI513. 936 0.0 1
(C90206) Dictyostelium discoideum slug cDNA, clone SSI247. 928 0.0 1
(C93153) Dictyostelium discoideum slug cDNA, clone SSM687. 904 0.0 1
(BJ384319) Dictyostelium discoideum cDNA clone:ddc49d04, 3' ... 898 0.0 1
(C89697) Dictyostelium discoideum slug cDNA, clone SSG154. 821 0.0 1
(C94079) Dictyostelium discoideum slug cDNA, clone SSG381. 819 0.0 1
(C92736) Dictyostelium discoideum slug cDNA, clone SSF173. 797 0.0 1
(C90150) Dictyostelium discoideum slug cDNA, clone SSI150. 793 0.0 1
(AU038075) Dictyostelium discoideum slug cDNA, clone SSH238. 729 0.0 2
(C89803) Dictyostelium discoideum slug cDNA, clone SSG174. 743 0.0 1
(C92771) Dictyostelium discoideum slug cDNA, clone SSF326. 739 0.0 1
(AU037639) Dictyostelium discoideum slug cDNA, clone SSE119. 622 0.0 2
(C84889) Dictyostelium discoideum slug cDNA, clone SSD383. 632 e-177 1
(AU061111) Dictyostelium discoideum slug cDNA, clone SLD243. 569 e-158 1
(AU052392) Dictyostelium discoideum slug cDNA, clone SLD243. 551 e-152 1
(AU036957) Dictyostelium discoideum slug cDNA, clone SSB871. 406 e-109 1
(AU061582) Dictyostelium discoideum slug cDNA, clone SLE708. 377 e-100 1
(C94273) Dictyostelium discoideum slug cDNA, clone SSK726. 274 4e-69 1
(C94504) Dictyostelium discoideum slug cDNA, clone SSL112. 242 1e-59 1
(AU038660) Dictyostelium discoideum slug cDNA, clone SSL314. 202 1e-47 1
(GR582202) CBZZ2000.g1 CBZZ Dictyostelium purpureum 18 hr st... 52 7e-11 3
(GR577495) CBXW561.b1 CBXW Dictyostelium purpureum 6 hr vege... 52 2e-10 3
(GR571819) CBTG2215.g1 CBTG Dictyostelium purpureum 12 hr ve... 52 2e-10 3
(GR571818) CBTG2215.b1 CBTG Dictyostelium purpureum 12 hr ve... 52 2e-10 3
(AC118884) Rattus norvegicus clone CH230-481K21, WORKING DRA... 46 1.8 1
(AC115659) Rattus norvegicus clone CH230-361G14, WORKING DRA... 46 1.8 1
(AC165681) Bos taurus clone CH240-166A2, WORKING DRAFT SEQUE... 44 2.5 2
(AC008331) Drosophila melanogaster, chromosome 2L, region 29... 42 6.9 3
(CR392045) Zebrafish DNA sequence from clone DKEY-167C9 in l... 44 7.0 1
(AC131866) Rattus norvegicus clone CH230-178O24, *** SEQUENC... 44 7.0 1
(AC110977) Rattus norvegicus clone CH230-167N24, WORKING DRA... 44 7.0 1
(AC221117) Bos taurus clone CH240-393L24, WORKING DRAFT SEQU... 44 7.0 1
(AC184949) Bos taurus clone CH240-306D1, WORKING DRAFT SEQUE... 44 7.0 1
(ER507464) 1093015427992 Global-Ocean-Sampling_GS-35-01-01-1... 44 7.0 1
(ER336950) 1092344315358 Global-Ocean-Sampling_GS-34-01-01-1... 44 7.0 1
(DH546368) Rattus norvegicus DNA, BAC clone: RNB1-053A23, 5'... 44 7.0 1
(EL351254) CCEL7870.b1_L23.ab1 CCE(LMS) endive Cichorium end... 44 7.0 1
(CR491357) mth2-164P15FM1 BAC end, cultivar Jemalong A17 of ... 38 7.6 2
(AM442334) Vitis vinifera contig VV78X230341.7, whole genome... 40 8.0 2
>(AU039155) Dictyostelium discoideum slug cDNA, clone SSM454.
Length = 594
Score = 938 bits (473), Expect = 0.0
Identities = 473/473 (100%)
Strand = Plus / Plus
Query: 12 ttcgttcaacattaccaactgaatttgcagttaatgaatggcgtgaaagttttaaaaagg 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttcgttcaacattaccaactgaatttgcagttaatgaatggcgtgaaagttttaaaaagg 61
Query: 72 ccgctccattacaatcttctcttgctgcagtttctggtatcgcttcgttgcttacttttg 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ccgctccattacaatcttctcttgctgcagtttctggtatcgcttcgttgcttacttttg 121
Query: 132 gctccattgcaaaggcatcctgcaagacaatcaacaaagtaatcgtcaaagccacagaag 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gctccattgcaaaggcatcctgcaagacaatcaacaaagtaatcgtcaaagccacagaag 181
Query: 192 attcagttcgtcattgttgccaatgtaatggtttaggttggttgctaagtggtggtttaa 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 attcagttcgtcattgttgccaatgtaatggtttaggttggttgctaagtggtggtttaa 241
Query: 252 tgctttccattattccattcactttattagccattatgccagttaataagaaattacaat 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgctttccattattccattcactttattagccattatgccagttaataagaaattacaat 301
Query: 312 ccaaagaacttgatacctttgctgatgatactcgtcaattattagctcaatggggtgaat 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ccaaagaacttgatacctttgctgatgatactcgtcaattattagctcaatggggtgaat 361
Query: 372 tacattcagttcgttcagttctttcactctctgcggttgcaattatgggttacaaaatct 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tacattcagttcgttcagttctttcactctctgcggttgcaattatgggttacaaaatct 421
Query: 432 ttagacactcccatttgttaattaaatcttaaaaacatgttatcattaagatg 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttagacactcccatttgttaattaaatcttaaaaacatgttatcattaagatg 474
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 124079491
Number of Hits to DB: 621,427,224
Number of extensions: 33956369
Number of successful extensions: 2658920
Number of sequences better than 10.0: 44
Length of query: 604
Length of database: 117,728,717,442
Length adjustment: 24
Effective length of query: 580
Effective length of database: 114,750,809,658
Effective search space: 66555469601640
Effective search space used: 66555469601640
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home