Dictyostelium discoideum cDNA Clone SSM408

Size:		636
3' sequence:	TS980311
5' sequence:	-
Whole insert?:	Y
Accession #:	
Remarks:	*

Sequence SSM408

ATTAAATTGT TAGAAAATAT TAAAATTAAA AAATGGATTG TGCAATTACA
AAAGATGTAG AGGATATGTT AAGAAAATTT GATTCAAATG GTGATGGTAA
TATTACATTT GATGAAGCTG TAAAACGTTT GAAGGAAACC GGTTCAAAAG
ATCCATTACG TGCTGCCTCT TCAATGTTTA TTTCTCTTGA TAAGGATAAG
GATGGAATTA TTTCAATAAA AGAGATTCAT GGCCATAAGG CTGATGTTGC
TGCAAAGAAA TTGCAAAAGG CAATTAACAA CATCTGTAAC AACTTCTTGA
AAGGCTATGA CACTGATAAG GATGGAAGGA TCTCATGGGA TGAAGTATGC
AATTGGGTAA ATAAAAACAA TCCAGATGCA ATTGCTCCAC TTATGATTGT
TGAAAATTTC TTTAGTGAAT TGGATAAAGA TAATGACAGA TTCGTAACCA
AGTGTGAACT TCAGGAGTAC GTTACTAAAT ACAAAAGTCT CCCAGAACAA
TAAATAATTT ATTGTTCAAA TTCAATAATT ATTAATCAAC ATTTATAATT
TTCATTTTTA AAAAAATTTA AATAAATAAA TAAATAAAAA ATAATCTTTT
AAAAATAAAA AAAAAAAAAA AAAAAGGGCG CCCGCC

Translated Amino Acid Sequence SSM408

*ivrky*n*KMDCAITKDVEDMLRKFDSNGDGNITFDEAVKRLKETGSKDPLRAASSMFI
SLDKDKDGIISIKEIHGHKADVAAKKLQKAINNICNNFLKGYDTDKDGRISWDEVCNWVN
KNNPDAIAPLMIVENFFSELDKDNDRFVTKCELQEYVTKYKSLPEQ*iiycsnsiiinqh
l*fsflkkfk*ink*kiif*k*kkkkkkgar

Homology SSM408 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSM408 (SSM408Q) /CSM/SS/SSM4-A/SSM408Q.Seq.d/                       1106   0.0
SSM294 (SSM294Q) /CSM/SS/SSM2-D/SSM294Q.Seq.d/                       1106   0.0
SSK729 (SSK729Q) /CSM/SS/SSK7-B/SSK729Q.Seq.d/                       1106   0.0
SSH153 (SSH153Q) /CSM/SS/SSH1-C/SSH153Q.Seq.d/                       1106   0.0
SSG624 (SSG624Q) /CSM/SS/SSG6-A/SSG624Q.Seq.d/                       1106   0.0
SSF848 (SSF848Q) /CSM/SS/SSF8-B/SSF848Q.Seq.d/                       1106   0.0
SSF715 (SSF715Q) /CSM/SS/SSF7-A/SSF715Q.Seq.d/                       1106   0.0
SSF426 (SSF426Q) /CSM/SS/SSF4-B/SSF426Q.Seq.d/                       1106   0.0
SSE622 (SSE622Q) /CSM/SS/SSE6-A/SSE622Q.Seq.d/                       1106   0.0
SSE238 (SSE238Q) /CSM/SS/SSE2-B/SSE238Q.Seq.d/                       1106   0.0

Homology SSM408 vs DNA

Sequences producing significant alignments:                    (bits)  Value  N


X82784|X82784.1 D.discoideum mRNA for calcium binding protein.  1067  0.0  1
AC116987|AC116987.2 Dictyostelium discoideum chromosome 2 m...   989  0.0  2
AL929352|AL929352.1 Plasmodium falciparum strain 3D7, chrom...    38  0.010  7
AE014842|AE014842.1 Plasmodium falciparum 3D7 chromosome 11...    34  0.012  10
AX458553|AX458553.1 Sequence 99 from Patent WO0246454.            34  0.028  4
BQ875038|BQ875038.1 QGI6P19.yg.ab1 QG_ABCDI lettuce salinas...    42  0.032  2
AQ935960|AQ935960.1 CpG2743A CpIOWAgDNA1 Cryptosporidium pa...    38  0.035  2
AC026535|AC026535.3 Homo sapiens chromosome 1 clone RP11-36...    36  0.052  5
AL354807|AL354807.6 Human DNA sequence from clone RP11-522F...    42  0.087  4
AP004172|AP004172.1 Mycoplasma penetrans genomic DNA, compl...    32  0.090  10

Homology SSM408 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P54653) RecName: Full=Calcium-binding protein 2;  &S62881(S6288...    79   1e-13
(Q966Q9) RecName: Full=Calcium-binding protein H; AltName: Full=...    69   1e-10
(Q869S9) RecName: Full=Calcium-binding protein E; AltName: Full=...    69   2e-10
AB070447_1(AB070447|pid:none) Dictyostelium discoideum cbpE mRNA...    69   2e-10
AJ297597_1(AJ297597|pid:none) Dictyostelium discoideum mRNA for ...    67   5e-10
(Q54RF4) RecName: Full=Calcium-binding protein 4a;                     67   5e-10
U41625_3(U41625|pid:none) Caenorhabditis elegans cosmid K03A1, c...    58   3e-07
CP002585_4401(CP002585|pid:none) Pseudomonas brassicacearum subs...    58   4e-07
(P09485) RecName: Full=Calcium-binding protein LPS1-alpha;             57   7e-07
CR940353_624(CR940353|pid:none) Theileria annulata strain Ankara...    56   1e-06

Homology SSM408 vs Genome