Homology SSL655 vs Protein
Query= SSL655 (SSL655Q) /CSM/SS/SSL6-C/SSL655Q.Seq.d/
(520 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(O96626) RecName: Full=Actin-related protein 2/3 complex subunit... 276 3e-73
DQ985458_1(DQ985458|pid:none) Suberites domuncula actin related ... 105 1e-21
JI173835_1(JI173835|pid:none) TSA: Ascaris suum ASCF_6573_1314 m... 100 6e-20
AK150443_1(AK150443|pid:none) Mus musculus bone marrow macrophag... 99 1e-19
AJ719279_1(AJ719279|pid:none) Gallus gallus mRNA for hypothetica... 97 3e-19
BC162200_1(BC162200|pid:none) Danio rerio si:dkeyp-15f12.2, mRNA... 97 5e-19
AX239567_1(AX239567|pid:none) Sequence 10 from Patent WO0164874. 96 1e-18
AK008097_1(AK008097|pid:none) Mus musculus adult male small inte... 96 1e-18
AK166919_1(AK166919|pid:none) Mus musculus blastocyst blastocyst... 95 2e-18
BC044413_1(BC044413|pid:none) Danio rerio actin related protein ... 95 2e-18
BC135815_1(BC135815|pid:none) Xenopus tropicalis actin related p... 93 7e-18
BT073598_1(BT073598|pid:none) Oncorhynchus mykiss clone omyk-evn... 92 9e-18
BT049331_1(BT049331|pid:none) Salmo salar clone ssal-evd-548-050... 92 9e-18
AF139537_1(AF139537|pid:none) Danio rerio Arp2/3 complex 16kDa s... 91 2e-17
BC082419_1(BC082419|pid:none) Xenopus laevis MGC83272 protein, m... 91 2e-17
BT048914_1(BT048914|pid:none) Salmo salar clone ssal-eve-527-038... 91 2e-17
BC079805_1(BC079805|pid:none) Xenopus laevis MGC86407 protein, m... 91 3e-17
BC056697_1(BC056697|pid:none) Danio rerio actin related protein ... 90 4e-17
BC122080_1(BC122080|pid:none) Xenopus tropicalis actin related p... 88 2e-16
(A1L108) RecName: Full=Actin-related protein 2/3 complex subunit... 87 5e-16
EU868839_1(EU868839|pid:none) Sus scrofa actin related protein 2... 86 8e-16
DQ910364_1(DQ910364|pid:none) Anopheles funestus clone AF-7-90-9... 86 8e-16
(Q5E963) RecName: Full=Actin-related protein 2/3 complex subunit... 86 8e-16
BC074279_1(BC074279|pid:none) Xenopus laevis MGC84053 protein, m... 85 1e-15
AK056174_1(AK056174|pid:none) Homo sapiens cDNA FLJ31612 fis, cl... 85 2e-15
HQ448697_1(HQ448697|pid:none) Synthetic construct Homo sapiens c... 84 3e-15
AE014134_467(AE014134|pid:none) Drosophila melanogaster chromoso... 84 3e-15
EZ423646_1(EZ423646|pid:none) TSA: Glossina morsitans morsitans ... 84 3e-15
AL844588_5(AL844588|pid:none) Mouse DNA sequence from clone RP23... 84 4e-15
AB170150_1(AB170150|pid:none) Macaca fascicularis brain cDNA clo... 83 5e-15
JO841653_1(JO841653|pid:none) TSA: Amblyomma maculatum Am-28304 ... 80 6e-14
AJ291614_1(AJ291614|pid:none) Lumbricus rubellus mRNA for actin ... 79 1e-13
AF067624_1(AF067624|pid:none) Caenorhabditis elegans cosmid M01B... 79 1e-13
AL137800_10(AL137800|pid:none) Human DNA sequence from clone RP1... 77 3e-13
FR824291_19(FR824291|pid:none) Albugo laibachii Nc14, genomic co... 73 7e-12
FN392320_1307(FN392320|pid:none) Pichia pastoris GS115 chromosom... 72 2e-11
FN357544_26(FN357544|pid:none) Schistosoma mansoni genome sequen... 72 2e-11
EZ000108_1(EZ000108|pid:none) TSA: Schistosoma japonicum SJCHGC0... 71 2e-11
AY223467_1(AY223467|pid:none) Schistosoma japonicum clone ZZZ75 ... 71 2e-11
AX885922_1(AX885922|pid:none) Sequence 1785 from Patent EP1033401. 71 3e-11
FQ311442_284(FQ311442|pid:none) Sporisorium reilianum SRZ2 chrom... 68 2e-10
CP000287_307(CP000287|pid:none) Cryptococcus gattii WM276 chromo... 67 4e-10
BT080857_1(BT080857|pid:none) Caligus clemensi clone ccle-evs-50... 66 7e-10
BT124447_1(BT124447|pid:none) Picea sitchensis clone WS0474_D01 ... 66 9e-10
BT075936_1(BT075936|pid:none) Caligus rogercresseyi clone crog-e... 65 1e-09
AE017341_305(AE017341|pid:none) Cryptococcus neoformans var. neo... 65 1e-09
BT076211_1(BT076211|pid:none) Caligus rogercresseyi clone crog-e... 64 3e-09
BT078611_1(BT078611|pid:none) Lepeophtheirus salmonis Pacific fo... 62 2e-08
JI232689_1(JI232689|pid:none) TSA: Ascaris suum ASCP_9194_327 mR... 60 4e-08
AE016817_344(AE016817|pid:none) Ashbya gossypii ATCC 10895 chrom... 60 5e-08
AM431884_1(AM431884|pid:none) Vitis vinifera contig VV78X126512.... 59 1e-07
FP929138_437(FP929138|pid:none) Leptosphaeria maculans JN3 lm_Su... 58 2e-07
CP002500_301(CP002500|pid:none) Eremothecium cymbalariae DBVPG#7... 57 3e-07
CR382138_571(CR382138|pid:none) Debaryomyces hansenii strain CBS... 57 4e-07
A85022(A85022) probable actin polymerization factor [imported] -... 57 5e-07
AY052191_1(AY052191|pid:none) Arabidopsis thaliana AT4g01710/T15... 57 5e-07
(P40518) RecName: Full=Actin-related protein 2/3 complex subunit... 56 7e-07
HE580271_480(HE580271|pid:none) Naumovozyma dairenensis CBS 421 ... 55 1e-06
CP002688_7751(CP002688|pid:none) Arabidopsis thaliana chromosome... 55 2e-06
FN314680_1(FN314680|pid:none) Schistosoma japonicum isolate Anhu... 54 4e-06
BT098717_1(BT098717|pid:none) Soybean clone JCVI-FLGm-12J18 unkn... 52 1e-05
CU928175_344(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 50 5e-05
BT077931_1(BT077931|pid:none) Lepeophtheirus salmonis Pacific fo... 50 7e-05
AP007155_537(AP007155|pid:none) Aspergillus oryzae RIB40 DNA, SC... 48 2e-04
FQ790359_158(FQ790359|pid:none) Botryotinia fuckeliana isolate T... 47 3e-04
AM920433_58(AM920433|pid:none) Penicillium chrysogenum Wisconsin... 47 6e-04
BT066110_1(BT066110|pid:none) Zea mays full-length cDNA clone ZM... 46 0.001
AM270014_7(AM270014|pid:none) Aspergillus niger contig An02c0190... 44 0.005
AL390091_4(AL390091|pid:none) Neurospora crassa DNA linkage grou... 43 0.006
EU966271_1(EU966271|pid:none) Zea mays clone 293019 unknown mRNA. 42 0.011
CP003008_155(CP003008|pid:none) Myceliophthora thermophila ATCC ... 42 0.011
FN554973_1270(FN554973|pid:none) Trypanosoma brucei gambiense DA... 36 0.99
DQ493632_1(DQ493632|pid:none) Trypanosoma brucei ARPC5 (ARPC5) g... 36 0.99
S08598(S08598) hypothetical protein L - fruit fly (Drosophila me... 35 1.3
CP000293_63(CP000293|pid:none) Cryptococcus gattii WM276 chromos... 35 1.3
U89699_1(U89699|pid:none) Halteria sp. macronuclear DNA polymera... 35 1.3
FP929046_234(FP929046|pid:none) Faecalibacterium prausnitzii SL3... 34 2.9
AC159405_22(AC159405|pid:none) Trypanosoma brucei chromosome 8 c... 33 6.4
FN554971_647(FN554971|pid:none) Trypanosoma brucei gambiense DAL... 33 8.4
>(O96626) RecName: Full=Actin-related protein 2/3 complex subunit 5;
AltName: Full=Arp2/3 complex 16 kDa subunit;
Short=p16-ARC; &AF095934_1(AF095934|pid:none)
Length = 138
Score = 276 bits (706), Expect = 3e-73
Identities = 138/138 (100%), Positives = 138/138 (100%)
Frame = +1
Query: 37 MNYEDDNVESGQAGKSDAEYKADIANREKEVTKALNAGKPQDALNVALADPPIYTKTGAI 216
MNYEDDNVESGQAGKSDAEYKADIANREKEVTKALNAGKPQDALNVALADPPIYTKTGAI
Sbjct: 1 MNYEDDNVESGQAGKSDAEYKADIANREKEVTKALNAGKPQDALNVALADPPIYTKTGAI 60
Query: 217 KDQNATIVLNLLGSFKDKDVETSVETLNDDQLDILMKYVYRGLATGENSPIFFKWHECVL 396
KDQNATIVLNLLGSFKDKDVETSVETLNDDQLDILMKYVYRGLATGENSPIFFKWHECVL
Sbjct: 61 KDQNATIVLNLLGSFKDKDVETSVETLNDDQLDILMKYVYRGLATGENSPIFFKWHECVL 120
Query: 397 KKGGAGTIIRVISEKKTV 450
KKGGAGTIIRVISEKKTV
Sbjct: 121 KKGGAGTIIRVISEKKTV 138
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,236,125,360
Number of extensions: 23274231
Number of successful extensions: 49186
Number of sequences better than 10.0: 79
Number of HSP's gapped: 49104
Number of HSP's successfully gapped: 85
Length of query: 173
Length of database: 1,732,582,204
Length adjustment: 123
Effective length of query: 50
Effective length of database: 1,074,629,005
Effective search space: 53731450250
Effective search space used: 53731450250
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
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