Dictyostelium discoideum cDNA Clone SSL655

Size:		520
3' sequence:	MY980202
5' sequence:	LM981001
Whole insert?:	Y
Accession #:	
Remarks:	*

Sequence SSL655

CTCAATCATA TATATATAAA ATAATATTAC ATTAAAATGA ATTACGAAGA
CGACAACGTT GAATCAGGAC AAGCTGGTAA ATCAGATGCT GAATACAAAG
CAGATATTGC CAATAGAGAA AAAGAAGTAA CCAAAGCATT AAATGCTGGT
AAACCACAAG ATGCTTTAAA TGTAGCCTTA GCTGATCCAC CAATTTACAC
TAAAACAGGT GCAATCAAGG ATCAAAATGC AACCATTGTC CTCAATCTTT
TAGGTAGTTT TAAAGATAAA GATGTTGAAA CATCAGTCGA AACACTCAAC
GATGACCAAC TCGATATTTT AATGAAATAT GTCTACCGTG GTCTTGCTAC
CGGTGAAAAT TCACCAATCT TTTTCAAATG GCACGAATGT GTCCTCAAGA
AGGGTGGTGC TGGTACAATC ATTAGAGTTA TCTCTGAAAA GAAAACTGTT
TAAGCAATTA TCAATCCGAA TCTGTAACCA TTAAAAAATA GATTTCTATT
TATTAAAAAA AAATAAAAAA

Translated Amino Acid Sequence SSL655

lnhiyik*YYIKMNYEDDNVESGQAGKSDAEYKADIANREKEVTKALNAGKPQDALNVAL
ADPPIYTKTGAIKDQNATIVLNLLGSFKDKDVETSVETLNDDQLDILMKYVYRGLATGEN
SPIFFKWHECVLKKGGAGTIIRVISEKKTV*aiinpnl*plknrflfikkk*k

Homology SSL655 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSL655 (SSL655Q) /CSM/SS/SSL6-C/SSL655Q.Seq.d/                        999   0.0
SSH791 (SSH791Q) /CSM/SS/SSH7-D/SSH791Q.Seq.d/                        991   0.0
VSG195 (VSG195Q) /CSM/VS/VSG1-D/VSG195Q.Seq.d/                        973   0.0
VSJ381 (VSJ381Q) /CSM/VS/VSJ3-D/VSJ381Q.Seq.d/                        894   0.0
SSG116 (SSG116Q) /CSM/SS/SSG1-A/SSG116Q.Seq.d/                        870   0.0
VSG334 (VSG334Q) /CSM/VS/VSG3-B/VSG334Q.Seq.d/                        735   0.0
FC-IC0077 (FC-IC0077Q) /CSM/FC-IC/FC-IC0077Q.Seq.d/                   658   0.0
VSE765 (VSE765Q) /CSM/VS/VSE7-C/VSE765Q.Seq.d/                         42   0.008
VSE760 (VSE760Q) /CSM/VS/VSE7-C/VSE760Q.Seq.d/                         42   0.008
SSE728 (SSE728Q) /CSM/SS/SSE7-B/SSE728Q.Seq.d/                         42   0.008

Homology SSL655 vs DNA

Sequences producing significant alignments:                    (bits)  Value  N


AF095934|AF095934.1 Dictyostelium discoideum p16-Arc (arpH)...   999  0.0  1
AC099711|AC099711.2 Mus musculus clone RP23-397C11, WORKING...    52  0.017  3
AC131509|AC131509.1 Strongylocentrotus purpuratus clone Sp5...    44  0.15  3
AE015939|AE015939.1 Clostridium tetani E88, section 4 of 10...    36  0.24  8
AC102340|AC102340.3 Mus musculus clone RP23-163J23, WORKING...    44  0.29  2
AC110666|AC110666.2 Canis familiaris clone RP81-156E11, WOR...    42  0.39  3
AC106975|AC106975.4 Rattus norvegicus clone CH230-156N22, *...    46  0.43  1
AP006133|AP006133.1 Lotus corniculatus var. japonicus genom...    46  0.43  1
AL356304|AL356304.3 Human DNA sequence *** SEQUENCING CANCE...    46  0.43  1
AC092970|AC092970.10 Homo sapiens 3 BAC RP11-571C23 (Roswel...    46  0.43  1

Homology SSL655 vs Protein

Sequences producing significant alignments:                      (bits) Value


(O96626) RecName: Full=Actin-related protein 2/3 complex subunit...   276   3e-73
DQ985458_1(DQ985458|pid:none) Suberites domuncula actin related ...   105   1e-21
JI173835_1(JI173835|pid:none) TSA: Ascaris suum ASCF_6573_1314 m...   100   5e-20
AK150443_1(AK150443|pid:none) Mus musculus bone marrow macrophag...    99   1e-19
AJ719279_1(AJ719279|pid:none) Gallus gallus mRNA for hypothetica...    97   3e-19
BC162200_1(BC162200|pid:none) Danio rerio si:dkeyp-15f12.2, mRNA...    97   5e-19
AX239567_1(AX239567|pid:none) Sequence 10 from Patent WO0164874.       96   1e-18
AK008097_1(AK008097|pid:none) Mus musculus adult male small inte...    96   1e-18
AK166919_1(AK166919|pid:none) Mus musculus blastocyst blastocyst...    95   2e-18
BC044413_1(BC044413|pid:none) Danio rerio actin related protein ...    95   2e-18

Homology SSL655 vs Genome