Dictyostelium discoideum cDNA Clone SSL649

Size:		0.8k
3' sequence:	MY980202
5' sequence:	TM981201
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSL649

AATCAATTAG AAATTGGGCC ACTTTACCAC AAAATAGTGT TGCCTCTCTT
TCTTTTGAAA AAGATAACGC TCTCAAAACA ATTGAAAATG CAAATCTTGA
TAAATCAAAA CATAATGTCA TTTCAAATTT AAATCAACTT CAACAACAAC
AACCATCATC TGATGAATTA ATGATTGACC AAAAAGAAGA AAAGAATTGT
AATAATAATA ATGAAAATAA TAATAATAAT GACAATAATA AAAATAGTGA
TGATGAAAAA GGTAAAGAAA TTGAAGAAAT TAAAAGAAAA TCAACAACAA
CAACCATTTC ACCAACTCGT TATGTAAATA ATTCAACTAT TAGTTTATTA
GTTAATCCAA CATCGGTAAT TGGTGATATA CCAGATGATT TGATGAAAAA
TTCAAATGTT ACTACTTTTG GTGAAAACTC TTCTTTCAAG TTTAATTTCT
TGATTGACAC TCAAAATTTC CCAAATGGTT CTAATGATAT TTCAAAAGCA
TTCTTTGATA ATGAAAATCA ACAAATGACT GTCACCTCTG TTATTATTGC
AATTCAAAAA TCACCTAAAA CTCCTTCTCA GCAACCATCA ACCAAATAAT
TTTTTTTTAA AAAAATAATT TTTTTATTTT CTATCAATTT TTCTATTTTT
TTATTTATCT TTTTTTTAAA ACAAATAATA ATAATA---- ------TGCT
CCGNCCGTTG TGGTGGGATG TGGCGGATAC ATTTCACACG GGGAACGCTA
TGCCNTGCTT CGCCAGCGCG CATTACCCCT CCCTAAGGGG ACAAGGCTGG
GTCCCGGCCC CCCCTCGGGG TCGGCCCCGC GCCGGATCCA TTGGAATTGG
GCCACTTTCC CACAAAATGG TGTGCCTCTC TTTCTTTTGA AAAAGATCCG
CTCTCAAACA TTGAAAATGC AAATCTTGAT AACCTCAAAA CATAATGTCA
TTTCAAATTT AAATCAACTT CAACAACAAC AACCATCATC TGATGAATTA
ATGATTGACC AAAAGGAAGA AAGAATTGTC ATAATAATAA TGCAAATCAT
CATAATAATG ACAATAATAA AAATAGTGAT GATGAAAAAG GTAAGGAAAT
TGAAGAAATT AAAGGAAAAT CAACAACAAC AACCATTTCA CCAACTCGTT
ATGTAAATAA TTCAACTATT AGTTTATTAG TTAATCCAAC ATCGGTAATT
GGTGATATAC CGGATGATTT GATGAAAAAT TCAAATGTTA CTACTTTTGG
TGAAAACTCT TCTTTCAAGT TTAATTTCTT GATTGACACT CAAAATTTCC
CAAATGGTTC TAATGATATT TCAAAAGCAT TCTTTGATAA TGAAAATCAA
CAAATGACTG TCACCTCTGT TATTATTGCA ATTCAAAAAT CACCTAAAAC
TCCTTCTCAG CAACCATCAA CCAAATAATT TTTTTTTAAA AAAATAATTT
TTTTATTTTC TATCAATTTT TCTATTTTTT TATTTATCTT TTTTTTAAAA
CAAATAATAA TAATAAAAAA AAAAAAAAAA AAACAAAATT CTTTTTCCAA
AAATAAAAAA AAAAAAAAAA A

Translated Amino Acid Sequence SSL649

sirnwatlpqnsvaslsfekdnalktienanldkskhnvisnlnqlqqqqpssdelmidq
keekncnnnnennnnndnnknsddekgkeieeikrksttttisptryvnnstisllvnpt
svigdipddlmknsnvttfgenssfkfnflidtqnfpngsndiskaffdnenqqmtvtsv
iiaiqkspktpsqqpstk*FFFKKIIFLFSINFSIFLFIFFLKQIIII---

---APXVVVGCGGYISHGERYAXLRQRALPLPKGTRLGPGPPSGSAPRRIHWNWATFPQN
GVPLFLLKKIRSQTLKMQILITSKHNVISNLNQLQQQQPSSDELMIDQKEERIVIIIMQI
IIIMTIIKIVMMKKVRKLKKLKENQQQQPFHQLVM*iiqllvy*liqhr*lviyrmi**k
iqmllllvktllsslis*ltlkisqmvlmifqkhslimkink*lspllllqfknhlklll
snhqpnnfflkk*ffyflsiflffylsff*nk****kkkkknkilfpkikkkkk

Homology SSL649 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSL649 (SSL649Q) /CSM/SS/SSL6-C/SSL649Q.Seq.d/                       1394   0.0
AFK160 (AFK160Q) /CSM/AF/AFK1-C/AFK160Q.Seq.d/                        965   0.0
VFO825 (VFO825Q) /CSM/VF/VFO8-B/VFO825Q.Seq.d/                        963   0.0
CHF875 (CHF875Q) /CSM/CH/CHF8-D/CHF875Q.Seq.d/                        811   0.0
VHI629 (VHI629Q) /CSM/VH/VHI6-B/VHI629Q.Seq.d/                        789   0.0
VHE302 (VHE302Q) /CSM/VH/VHE3-A/VHE302Q.Seq.d/                         48   4e-04
CHL686 (CHL686Q) /CSM/CH/CHL6-D/CHL686Q.Seq.d/                         48   4e-04
SHD769 (SHD769Q) /CSM/SH/SHD7-C/SHD769Q.Seq.d/                         46   0.002
SHA694 (SHA694Q) /CSM/SH/SHA6-D/SHA694Q.Seq.d/                         46   0.002
VHL606 (VHL606Q) /CSM/VH/VHL6-A/VHL606Q.Seq.d/                         44   0.006

Homology SSL649 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(C93725) Dictyostelium discoideum slug cDNA, clone SSL649.        698   0.0    4
(BJ345089) Dictyostelium discoideum cDNA clone:dda21g15, 3' ...   670   0.0    3
(BJ436174) Dictyostelium discoideum cDNA clone:ddv30b08, 3' ...   666   0.0    3
(BJ441951) Dictyostelium discoideum cDNA clone:ddv48i08, 3' ...   299   0.0    4
(BJ379111) Dictyostelium discoideum cDNA clone:ddc33f20, 3' ...   569   0.0    3
(AU074715) Dictyostelium discoideum slug cDNA, clone SSL649.      317   2e-82  2
(GR568184) CBTF3688.g1 CBTF Dictyostelium purpureum 12 hr ve...    66   7e-26  4
(GR582721) CBZZ905.g1 CBZZ Dictyostelium purpureum 18 hr sta...    66   7e-14  3
(EY339766) CAWY9885.rev CAWY Helobdella robusta Subtracted E...    36   2e-07  4
(BM181884) fv51b11.y1 Sugano SJD adult male Danio rerio cDNA...    42   2e-07  4

Homology SSL649 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54WU0) RecName: Full=Probable basic-leucine zipper transcripti...   285   4e-75
T09082(T09082)telomere-associated recQ-like helicase (clone UT5)...    37   2.4
AF030886_1(AF030886|pid:none) Ustilago maydis clone UT5 telomere...    37   2.4
CR533423_1(CR533423|pid:none) Paramecium tetraurelia, complete g...    36   5.5

Homology SSL649 vs Genome