Dictyostelium discoideum cDNA Clone SSL643

Size:		1.3k
3' sequence:	MY980202
5' sequence:	*
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSL643

---------- ATAAAAAATG CCAAGGATAA TGGGTCCCCT CAAATGGTCA
CCAGATGTCC CACTCCATTA GTGAAATGTG ATGGTACCAT GTCCGATGCC
CTTGTGATGA ACCACTGGTT AATACCCATA TATACCACAA ATGTCCAGGT
TGGATGAAAT GCAATTCACC ACTGGCTCAT GTCACCACAA ATAATGAATG
TCAAGATGGT AATGAATGTA CTGATAATAT TTGTGTTGCT GCAGCTACAA
ATATAAATCA AGGTGAATGT TCAAATAAGA CAGTTTCATG TCCAACCACT
GATAAATGTT TAGTATATAC TTGTGATACT AATAAAGGTT GTGTTTCAAA
ACCAGTGGTA TGTCCAAATA GTGGTAATTG TCAAGTTGGT GTTTGTGATA
GTGTTAAAGG TTGTACACTT GTACCACGTG TTTGTAATTC AACTGCTTTC
TGTTTAGTTT CCCAATGTGA TGAAGCTATT GGTTGTATAA CTTTTGAAAA
ACGTTGCTCA CCTGATAATT CAAAGTGTCA AAGTGGTGTT TGTGTTAATG
CAACTGCAAC TGAACCTGGT AAATGTAAAT CTGTAGATTA TGATCCTAAA
CCATTTATTT GCCAAACTGG TGCAATAGTT TCAACTGCTG TTGTTGCTTC
TGTTGTTGTA GTAGGTGCTG TTGTTTTAGG TGCTGCAATT TTTGCTGGTA
AAAAAGGATA TGATCATTGG AAAGCGAATC AAGGACAAGT ATTTGCAAGT
AGTAATGCAA ATCCATTGTA TCAACAATCA AATAATGGTG GTGAAAATGC
TCTCTTTGAA GCACCTCAAT AGTTTTAAAT TTTTACTCTC TCTTTCAAAA
TCTTATATAA TTTCTATTTA AAAATTTTTA CTTTTCAAAT CTTTTATTAT
TTATAAAAAT AAAAAAAACT ATTTAATTTA ATCA

Translated Amino Acid Sequence SSL643

---kkcqg*wvpsnghqmshsisem*WYHVRCPCDEPLVNTHIYHKCPGWMKCNSPLAHV
TTNNECQDGNECTDNICVAAATNINQGECSNKTVSCPTTDKCLVYTCDTNKGCVSKPVVC
PNSGNCQVGVCDSVKGCTLVPRVCNSTAFCLVSQCDEAIGCITFEKRCSPDNSKCQSGVC
VNATATEPGKCKSVDYDPKPFICQTGAIVSTAVVASVVVVGAVVLGAAIFAGKKGYDHWK
ANQGQVFASSNANPLYQQSNNGGENALFEAPQ*f*iftlsfkilynfylkiftfqifyyl
*k*kklfnli

Homology SSL643 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSL643 (SSL643Q) /CSM/SS/SSL6-B/SSL643Q.Seq.d/                       1772   0.0
AHL278 (AHL278Q) /CSM/AH/AHL2-D/AHL278Q.Seq.d/                       1451   0.0
SSB380 (SSB380Q) /CSM/SS/SSB3-D/SSB380Q.Seq.d/                       1437   0.0
AFN401 (AFN401Q) /CSM/AF/AFN4-A/AFN401Q.Seq.d/                       1421   0.0
SSJ816 (SSJ816Q) /CSM/SS/SSJ8-A/SSJ816Q.Seq.d/                       1415   0.0
CHG109 (CHG109Q) /CSM/CH/CHG1-A/CHG109Q.Seq.d/                       1407   0.0
AFN426 (AFN426Q) /CSM/AF/AFN4-B/AFN426Q.Seq.d/                       1396   0.0
AFH708 (AFH708Q) /CSM/AF/AFH7-A/AFH708Q.Seq.d/                       1368   0.0
CHJ128 (CHJ128Q) /CSM/CH/CHJ1-B/CHJ128Q.Seq.d/                       1334   0.0
SHA795 (SHA795Q) /CSM/SH/SHA7-D/SHA795Q.Seq.d/                       1279   0.0

Homology SSL643 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(C93720) Dictyostelium discoideum slug cDNA, clone SSL643.       1610   0.0    1
(BJ354521) Dictyostelium discoideum cDNA clone:dda53k20, 3' ...  1261   0.0    3
(BJ379163) Dictyostelium discoideum cDNA clone:ddc34a03, 3' ...  1259   0.0    1
(BJ347400) Dictyostelium discoideum cDNA clone:dda27b02, 3' ...  1259   0.0    1
(AU051875) Dictyostelium discoideum slug cDNA, clone SSB380.     1253   0.0    3
(C91205) Dictyostelium discoideum slug cDNA, clone SSJ816.       1251   0.0    1
(BJ403685) Dictyostelium discoideum cDNA clone:dds25n23, 3' ...  1251   0.0    3
(BJ347496) Dictyostelium discoideum cDNA clone:dda27d08, 3' ...  1233   0.0    1
(BJ343477) Dictyostelium discoideum cDNA clone:dda16p01, 3' ...  1221   0.0    1
(BJ405953) Dictyostelium discoideum cDNA clone:dds33i18, 3' ...  1205   0.0    1

Homology SSL643 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54P69) RecName: Full=Protein psiM; Flags: Precursor;                221   6e-56
(Q86HT1) RecName: Full=Protein psiL; Flags: Precursor;  &AC11695...   220   1e-55
(Q94494) RecName: Full=Protein psiH; Flags: Precursor;  &U67940_...   209   2e-52
(Q557E9) RecName: Full=Protein psiG; Flags: Precursor;  &AC11568...   202   2e-50
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor;                181   5e-44
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor;                140   1e-31
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor;                109   2e-22
S44208(S44208) extracellular matrix protein B - Dictyostelium mi...    83   2e-14
(P11976) RecName: Full=Prestalk protein; AltName: Full=Extracell...    81   7e-14
(Q54YG2) RecName: Full=Extracellular matrix protein A; AltName: ...    79   5e-13

Homology SSL643 vs Genome