Homology SSL625 vs DNA
Query= SSL625 (SSL625Q) /CSM/SS/SSL6-B/SSL625Q.Seq.d/
(559 letters)
Database: ddbj_A
124,079,491 sequences; 117,728,717,442 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(C93702) Dictyostelium discoideum slug cDNA, clone SSL625. 817 0.0 2
(AU271745) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 361 e-122 3
(C90116) Dictyostelium discoideum slug cDNA, clone SSI110. 361 e-122 3
(BJ382536) Dictyostelium discoideum cDNA clone:ddc45f05, 3' ... 281 e-111 4
(AU038401) Dictyostelium discoideum slug cDNA, clone SSH666. 361 e-106 2
(CU313319) Zebrafish DNA sequence from clone DKEY-182O1 in l... 52 0.027 1
(CR559944) Zebrafish DNA sequence from clone CH211-10D19 in ... 52 0.027 1
(CT025850) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.027 1
(CR392038) Zebrafish DNA sequence from clone DKEY-172J4 in l... 50 0.11 1
(AM444866) Vitis vinifera contig VV78X267733.60, whole genom... 50 0.11 1
(AQ402267) HS_5065_A1_A05_SP6E RPCI-11 Human Male BAC Librar... 50 0.11 1
(BX057417) Single read from an extremity of a full-length cD... 40 0.24 2
(DK085208) Oryzias latipes cDNA, clone: olea53d15, 3' end. 36 0.31 2
(DK118317) Oryzias latipes cDNA, clone: oleb17a10, 3' end. 36 0.31 2
(DK211245) Oryzias latipes cDNA, clone: olova18o21, 3' end. 36 0.31 2
(DK188251) Oryzias latipes cDNA, clone: olova18o21, 5' end. 36 0.31 2
(DC271053) Oryzias latipes cDNA clone:olrf13a02, 3' end. 36 0.31 2
(AM355481) Oryzias latipes EST, clone FOE002-P00028-DPE-R_C14. 36 0.31 2
(BJ509612) Oryzias latipes cDNA clone:MF01FSA008N14, 3' end ... 36 0.31 2
(DC256124) Oryzias latipes cDNA clone:olrfe17n02, 3' end. 36 0.31 2
(BJ523984) Oryzias latipes cDNA clone:MF01SSB003L13, 5' end ... 36 0.31 2
(BJ520762) Oryzias latipes cDNA clone:MF01SSB016J14, 5' end ... 36 0.33 2
(AC197180) Canis familiaris chromosome 2, clone XX-436L9, co... 48 0.42 1
(AC187327) Canis familiaris chromosome 2, clone XX-24B13, co... 48 0.42 1
(AC112352) Rattus norvegicus clone CH230-133K21, *** SEQUENC... 48 0.42 1
(AC112044) Rattus norvegicus clone CH230-89P21, *** SEQUENCI... 48 0.42 1
(AC107149) Rattus norvegicus clone CH230-56G2, *** SEQUENCIN... 48 0.42 1
(AC189723) Canis lupus familiaris clone XX-311H18, *** SEQUE... 48 0.42 1
(EL275804) EB3RODY02GEB2G 8-day Arabidopsis seedlings, aeria... 48 0.42 1
(AC238624) Carica papaya BAC clone 78H09, complete sequence. 38 0.76 5
(GR569272) CBTF4466.g1 CBTF Dictyostelium purpureum 12 hr ve... 44 0.80 2
(CU928593) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 0.82 6
(AC189108) Gallus gallus BAC clone CH261-162K7 from chromoso... 34 0.87 2
(AC201132) Strongylocentrotus purpuratus clone R3-14A8, WORK... 34 0.91 2
(AC195719) Sorex araneus clone SA_Ba-100P21, WORKING DRAFT S... 44 0.98 3
(AP010116) Lotus japonicus genomic DNA, clone: LjT14M06, TM0... 32 1.2 6
(AC203733) Sorex araneus clone SA_Ba-176G14, WORKING DRAFT S... 44 1.3 3
(AC230706) Bos taurus clone CH240-501J1, WORKING DRAFT SEQUE... 42 1.6 3
(CR749745) Zebrafish DNA sequence from clone DKEY-7O20 in li... 46 1.6 1
(AL808028) Mouse DNA sequence from clone RP23-18H24 on chrom... 46 1.6 1
(AP003436) Oryza sativa Japonica Group genomic DNA, chromoso... 46 1.6 1
(AM449677) Vitis vinifera contig VV78X150189.9, whole genome... 46 1.6 1
(EA686036) Sequence 64915 from patent US 7365185. 46 1.6 1
(EA685992) Sequence 64871 from patent US 7365185. 46 1.6 1
(EA649932) Sequence 28811 from patent US 7365185. 46 1.6 1
(EA621566) Sequence 445 from patent US 7365185. 46 1.6 1
(EA621549) Sequence 428 from patent US 7365185. 46 1.6 1
(FV536181) Modified Microbial Nucleic Acid. 46 1.6 1
(FV536180) Modified Microbial Nucleic Acid. 46 1.6 1
(AB490331) Polypedilum vanderplanki PvTpp, PvTps genes for t... 46 1.6 1
(AC068802) Homo sapiens 12 BAC RP11-510P12 (Roswell Park Can... 46 1.6 1
(AC091088) Oryza sativa Japonica Group chromosome 1 clone P0... 46 1.6 1
(FH598445) CHO_OF4649xc04f1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 1.6 1
(DH922941) Mus musculus domesticus DNA, BAC clone: B6Ng01-11... 46 1.6 1
(BF863210) 963042A06.x1 C. reinhardtii CC-1690, Stress condi... 46 1.6 1
(CT954263) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 1.7 3
(CU928307) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 2.3 2
(CU694293) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 2.3 2
(CU856032) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 2.3 4
(AP002496) Homo sapiens genomic DNA, chromosome 11q, clone:C... 34 2.6 5
(EJ382684) 1092963769282 Global-Ocean-Sampling_GS-28-01-01-1... 38 2.6 2
(AQ575286) nbxb0087G05f CUGI Rice BAC Library Oryza sativa J... 40 2.7 2
(FV536149) Modified Microbial Nucleic Acid. 34 2.8 2
(FV536148) Modified Microbial Nucleic Acid. 34 2.8 2
(EW954851) G894P5212RA7.T0 Ixodes scapularis Pooled Non-infe... 36 2.8 2
(EW887432) G894P555RE11.T0 Ixodes scapularis Pooled Non-infe... 36 2.9 2
(AC103230) Rattus norvegicus clone CH230-226D16, *** SEQUENC... 38 3.0 2
(EJ106285) 1092343137903 Global-Ocean-Sampling_GS-27-01-01-1... 38 3.0 2
(EJ158899) 1092344040316 Global-Ocean-Sampling_GS-27-01-01-1... 38 3.2 2
(AC096962) Rattus norvegicus clone CH230-95L19, WORKING DRAF... 34 3.2 2
(EW909619) G894P5145RH14.T0 Ixodes scapularis Pooled Non-inf... 36 3.2 2
(AC128276) Rattus norvegicus clone CH230-392N9, WORKING DRAF... 34 3.2 2
(AL352978) Human chromosome 14 DNA sequence BAC C-3059L23 of... 32 3.3 2
(CS442670) Sequence 53 from Patent WO2006050313. 40 3.3 3
(GC698327) Sequence 13572 from patent US 6812339. 32 3.4 2
(GC697490) Sequence 12735 from patent US 6812339. 32 3.4 2
(AM423537) Vitis vinifera contig VV78X269510.27, whole genom... 34 3.6 2
(BZ278300) CH230-392N9.TJ CHORI-230 Segment 2 Rattus norvegi... 34 4.4 2
(AC138051) Felis catus clone RP86-184G23, WORKING DRAFT SEQU... 36 4.9 3
(FV536339) Modified Microbial Nucleic Acid. 42 4.9 7
(FV536338) Modified Microbial Nucleic Acid. 42 4.9 7
(CU463292) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 6.1 2
(AC123884) Mus musculus chromosome 9 clone RP23-470K2 map 9,... 40 6.4 3
(CU928126) Zebrafish DNA sequence from clone CH73-267C23. 44 6.5 1
(CU499342) Zebrafish DNA sequence from clone CH73-122L24 in ... 44 6.5 1
(CU469534) Zebrafish DNA sequence from clone CH73-86N6 in li... 44 6.5 1
(CU019552) Zebrafish DNA sequence from clone CH73-242D19 in ... 44 6.5 1
(BX927322) Zebrafish DNA sequence from clone CH211-101J8 in ... 44 6.5 1
(AL929092) Zebrafish DNA sequence from clone DKEY-1M11 in li... 44 6.5 1
(AC167812) Mus musculus BAC clone RP24-299F5 from chromosome... 44 6.5 1
(AC164290) Mus musculus BAC clone RP23-385O17 from chromosom... 44 6.5 1
(AC140980) Mus musculus BAC clone RP24-255K12 from chromosom... 44 6.5 1
(AC125443) Mus musculus chromosome 1, clone RP24-493N12, com... 44 6.5 1
(AC123718) Mus musculus chromosome 1, clone RP23-401A11, com... 44 6.5 1
(AC119259) Mus musculus chromosome 18, clone RP24-285N19, co... 44 6.5 1
(AM455437) Vitis vinifera, whole genome shotgun sequence, co... 44 6.5 1
(AM270130) Aspergillus niger contig An07c0120, complete genome. 44 6.5 1
(DJ386620) Diagnosis of Diseases Associated with Metastasis. 44 6.5 1
(AX348684) Sequence 142 from Patent WO0202807. 44 6.5 1
(AX345983) Sequence 1054 from Patent WO0200928. 44 6.5 1
(AX281416) Sequence 80 from Patent WO0177376. 44 6.5 1
(GN009018) Sequence 1459 from Patent EP2014669. 44 6.5 1
(AC149763) Bos taurus BAC CH240-53K11 (Children's Hospital ... 44 6.5 1
(AL360092) Human DNA sequence from clone RP11-113L23 on chro... 44 6.5 1
(AC117385) Homo sapiens 3 BAC RP11-13I22 (Roswell Park Cance... 44 6.5 1
(AC073174) Homo sapiens chromosome 10 clone RP11-319F12, com... 44 6.5 1
(AC149759) Bos taurus clone CH240-123F3, WORKING DRAFT SEQUE... 44 6.5 1
(AC113762) Rattus norvegicus clone CH230-89K14, *** SEQUENCI... 44 6.5 1
(AC110312) Rattus norvegicus clone CH230-213G4, *** SEQUENCI... 44 6.5 1
(AC106673) Rattus norvegicus clone CH230-108J3, WORKING DRAF... 44 6.5 1
(AC106549) Rattus norvegicus clone CH230-126G7, *** SEQUENCI... 44 6.5 1
(AC097388) Rattus norvegicus clone CH230-8O5, WORKING DRAFT ... 44 6.5 1
(FQ073944) Zebrafish DNA sequence HIGH QUALITY DRAFT from po... 44 6.5 1
(FQ073920) Zebrafish DNA sequence HIGH QUALITY DRAFT from po... 44 6.5 1
(CU694627) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 6.5 1
(AC094238) Rattus norvegicus clone CH230-3C3, *** SEQUENCING... 44 6.5 1
(CU062548) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 6.5 1
(AC194388) Zea mays chromosome 6 clone ZMMBBb-612B3; ZMMBBb0... 44 6.5 1
(AC184194) Strongylocentrotus purpuratus clone R3-3096B1, WO... 44 6.5 1
(AC180223) Strongylocentrotus purpuratus clone R3-36M23, WOR... 44 6.5 1
(AC178541) Strongylocentrotus purpuratus clone R3-3031F7, WO... 44 6.5 1
(AC168829) Strongylocentrotus purpuratus clone R3-13D20, WOR... 44 6.5 1
(HE555697) Sus scrofa GSS, clone WTSI_1005-811E18, end seque... 44 6.5 1
(EK104576) 1092963041404 Global-Ocean-Sampling_GS-31-01-01-1... 44 6.5 1
(EK073919) 1092961016145 Global-Ocean-Sampling_GS-31-01-01-1... 44 6.5 1
(DX448191) BE2010_C01_F IASMA L2 HindIII BAC library Vitis v... 44 6.5 1
(DU614500) OO__Ba0116E19.r OO__Ba Oryza officinalis genomic ... 44 6.5 1
(DU559939) OO__Ba0041I10.r OO__Ba Oryza officinalis genomic ... 44 6.5 1
(CZ651575) OM__Ba0200J23.r OM__Ba Oryza minuta genomic clone... 44 6.5 1
(CU779686) A BAC library has been constructed from PN40024 g... 44 6.5 1
(AG461021) Mus musculus molossinus DNA, clone:MSMg01-349B06.... 44 6.5 1
(AG422348) Mus musculus molossinus DNA, clone:MSMg01-294B07.... 44 6.5 1
(EG351040) SAAH-aad15g01.b1 Agen 0058 Schmidtea mediterranea... 44 6.5 1
(DT955126) CFW137-D11.x1d-t SHGC-CFW Gasterosteus aculeatus ... 44 6.5 1
(DT205694) JGI_CAAS13155.rev CAAS Pimephales promelas brain ... 44 6.5 1
(DT187618) JGI_ANNO52006.fwd ANNO Pimephales promelas Whole ... 44 6.5 1
(DT187617) JGI_ANNO52006.rev ANNO Pimephales promelas Whole ... 44 6.5 1
(DR753005) CCYMG4A03 Coprinus cinereus YMG medium exponentia... 44 6.5 1
(CX692031) ydd38f04.y2 Sea urchin EST Lib1 Strongylocentrotu... 44 6.5 1
(BM258829) 523743 MARC 3BOV Bos taurus cDNA 5', mRNA sequence. 44 6.5 1
(FN557490) Listeria seeligeri serovar 1/2b str. SLCC3954 com... 44 6.5 1
(AC141512) Rattus norvegicus clone CH230-44C3, WORKING DRAFT... 38 6.7 3
(AC178026) Strongylocentrotus purpuratus clone R3-3055H3, WO... 38 7.2 2
(AC214645) Nomascus leucogenys BAC clone CH271-79H12 from ch... 38 7.7 2
(CE633113) tigr-gss-dog-17000366726284 Dog Library Canis lup... 34 8.7 2
(HE344785) Sus scrofa GSS, clone WTSI_1005-563G8, end sequen... 34 9.1 2
(AP002798) Homo sapiens genomic DNA, chromosome 11q clone:RP... 34 9.3 4
(FV536137) Modified Microbial Nucleic Acid. 30 9.4 2
(FV536136) Modified Microbial Nucleic Acid. 30 9.4 2
(AC240088) Brassica oleracea clone BOT01-59F10, WORKING DRAF... 38 9.5 4
(AC202750) Saimiri boliviensis boliviensis clone CH254-242P1... 42 9.6 2
>(C93702) Dictyostelium discoideum slug cDNA, clone SSL625.
Length = 549
Score = 817 bits (412), Expect(2) = 0.0
Identities = 421/421 (100%)
Strand = Plus / Plus
Query: 38 tttatcaaggcccttttcatccttttcatcactctccacatcttcctctgtgagatccga 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28 tttatcaaggcccttttcatccttttcatcactctccacatcttcctctgtgagatccga 87
Query: 98 agttgtaccaatttcgataagatatgactccggggaaagcgccccctcatggccctcatc 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 agttgtaccaatttcgataagatatgactccggggaaagcgccccctcatggccctcatc 147
Query: 158 actatggggatagtttccnaaaantaattaaacctccaaaagccaatggctcatggggtt 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 actatggggatagtttccnaaaantaattaaacctccaaaagccaatggctcatggggtt 207
Query: 218 ccccatttggtgaanctcaaaactaggtttatcaagggcaccttcaaacattgatagcgg 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ccccatttggtgaanctcaaaactaggtttatcaagggcaccttcaaacattgatagcgg 267
Query: 278 tgatatttggatcactttaatggtaatcaacaagattcttaatgattatccaactcaaca 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tgatatttggatcactttaatggtaatcaacaagattcttaatgattatccaactcaaca 327
Query: 338 atctcaatatgcccttgtaattcaaaaggcttcaaaatgggtaaaacaacaattaacaag 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 atctcaatatgcccttgtaattcaaaaggcttcaaaatgggtaaaacaacaattaacaag 387
Query: 398 gttaaacattccaaatcaatatggctcattattagctacttcaaaattacatatttaata 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gttaaacattccaaatcaatatggctcattattagctacttcaaaattacatatttaata 447
Query: 458 t 458
|
Sbjct: 448 t 448
Score = 97.6 bits (49), Expect(2) = 0.0
Identities = 49/49 (100%)
Strand = Plus / Plus
Query: 486 cttgtaaatcttttcttttcttttccaataaataaacattttaattatt 534
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cttgtaaatcttttcttttcttttccaataaataaacattttaattatt 524
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 124079491
Number of Hits to DB: 692,214,726
Number of extensions: 44337175
Number of successful extensions: 4941681
Number of sequences better than 10.0: 156
Length of query: 559
Length of database: 117,728,717,442
Length adjustment: 24
Effective length of query: 535
Effective length of database: 114,750,809,658
Effective search space: 61391683167030
Effective search space used: 61391683167030
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home