Dictyostelium discoideum cDNA Clone SSL560

Size:		1.7k
3' sequence:	TS980421
5' sequence:	TS981208
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSL560

AAAGGATGAA AAATTACAAT CAATTCAATT TGAGAATCAA GAAAAAGAAA
AACAACTCTC TGAAAAGGAT GAAAAGTTAC AATCAATTCA ACAAAATTTA
AATCAATTAA ATGATGAAAA TCAAGAAAAA GTAAAACAAT TTTCTGAAAA
AGACGAAAAG CTACAATCAA TTCAACAAGA TTTAAATCAA TTAAAACAAG
AAAATCAAGA AAAAGAAAAA CAACTCTCTG AAAAGGATGA AAAGTTACAA
TCAATTCAAC AAGATTTAAA TCAATTAAAT GATGATCAAA TTAAAAAAAA
TGAAAAATTA AAAGAAAAAG AAGAACAATT ATTAAAATTA CAACAAGACT
TTAATGATCA ACAATCTCAA CAATTAAAAC AATTGGAAGA GAAATTATCT
GAAAAAGAAA ATCAATTACA ACAATTAAAA CAAGAGAATG AAATCAATCA
ATTGAATCAA CAACAACAAT CAAATGAAAT TATTCAACAA TTAAAAGATC
AACTTTTAAA ACAACAACAA CAAGAACAAC AAGAAAATAA TAATGAAAAA
GAAATTGAAA GATTAATACA AGAGATTGAA CAATTGAAAC AACAACAAGA
GATTGACCAA TCGGAACTTA GTAATAAAG- ---------T TATTGGTGCT
GCTGTTTTAG CTATCTCTAC TCTCTTTTCT TCTTCAAGAC CAATCAAATA
TGAAAAACCA ACTTAAACAT TGGTATTTTT TTTCTTATTA CTTTCTTTCC
TTTTTTTTTT CAATTGTACC AAATGTATAT AGAGTGAAAT AATATAAAAA
TATAAATATA AATATAAACA TATATAAAAA TAATAAAATA TAAAATAAAA
TAAAATAAAA TATATAAAAA AAAAA

Translated Amino Acid Sequence SSL560

KDEKLQSIQFENQEKEKQLSEKDEKLQSIQQNLNQLNDENQEKVKQFSEKDEKLQSIQQD
LNQLKQENQEKEKQLSEKDEKLQSIQQDLNQLNDDQIKKNEKLKEKEEQLLKLQQDFNDQ
QSQQLKQLEEKLSEKENQLQQLKQENEINQLNQQQQSNEIIQQLKDQLLKQQQQEQQENN
NEKEIERLIQEIEQLKQQQEIDQSELSNK---

---IGAAVLAISTLFSSSRPIKYEKPT*tlvffflllsflfffnctkci*seii*kykyk
ykhi*k**nik*nkikyikkk

Homology SSL560 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSL560 (SSL560Q) /CSM/SS/SSL5-C/SSL560Q.Seq.d/                        321   1e-86
CHQ413 (CHQ413Q) /CSM/CH/CHQ4-A/CHQ413Q.Seq.d/                        192   6e-48
SHA355 (SHA355Q) /CSM/SH/SHA3-C/SHA355Q.Seq.d/                        190   2e-47
AHG872 (AHG872Q) /CSM/AH/AHG8-C/AHG872Q.Seq.d/                        190   2e-47
SHC248 (SHC248Q) /CSM/SH/SHC2-B/SHC248Q.Seq.d/                        182   6e-45
SSM822 (SSM822Q) /CSM/SS/SSM8-A/SSM822Q.Seq.d/                        168   9e-41
SSI863 (SSI863Q) /CSM/SS/SSI8-C/SSI863Q.Seq.d/                        168   9e-41
AHK380 (AHK380Q) /CSM/AH/AHK3-D/AHK380Q.Seq.d/                        155   1e-36
AHH728 (AHH728Q) /CSM/AH/AHH7-B/AHH728Q.Seq.d/                        131   2e-29
AHJ855 (AHJ855Q) /CSM/AH/AHJ8-C/AHJ855Q.Seq.d/                        101   2e-20

Homology SSL560 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AF057019) Dictyostelium discoideum interaptin (abpD) gene, ...   190   e-167  6
(BJ385186) Dictyostelium discoideum cDNA clone:ddc54j04, 3' ...   190   4e-44  2
(AU074690) Dictyostelium discoideum slug cDNA, clone SSL560.      141   8e-44  2
(BJ351824) Dictyostelium discoideum cDNA clone:dda44p18, 3' ...   141   2e-43  2
(BJ403298) Dictyostelium discoideum cDNA clone:dds24n13, 3' ...   141   3e-43  2
(BJ404418) Dictyostelium discoideum cDNA clone:dds28o12, 3' ...   133   6e-41  2
(AU038851) Dictyostelium discoideum slug cDNA, clone SSL560.      170   6e-41  2
(C93421) Dictyostelium discoideum slug cDNA, clone SSM822.        163   1e-38  2
(BJ353934) Dictyostelium discoideum cDNA clone:dda51p19, 3' ...   157   9e-37  2
(BJ352312) Dictyostelium discoideum cDNA clone:dda46h07, 3' ...   131   4e-29  2

Homology SSL560 vs Protein

Sequences producing significant alignments:                      (bits) Value


(O76329) RecName: Full=Interaptin; AltName: Full=Actin-binding p...    80   2e-13

Homology SSL560 vs Genome