Homology SSL535 vs Protein
Query= SSL535 (SSL535Q) /CSM/SS/SSL5-B/SSL535Q.Seq.d/
(641 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q8T2U0) RecName: Full=Uncharacterized protein DDB_G0275255; Fla... 104 3e-21
AC116305_115(AC116305|pid:none) Dictyostelium discoideum chromos... 94 4e-18
AC116921_3(AC116921|pid:none) Dictyostelium discoideum chromosom... 87 6e-16
AC116305_112(AC116305|pid:none) Dictyostelium discoideum chromos... 85 2e-15
EU854565_1(EU854565|pid:none) Danio rerio fibrillin 4 (fbn4) mRN... 41 0.040
JI167510_1(JI167510|pid:none) TSA: Ascaris suum ASCF_2626_2469 m... 36 1.7
JI167352_1(JI167352|pid:none) TSA: Ascaris suum ASCF_2503_2527 m... 36 1.7
CP002529_293(CP002529|pid:none) Vulcanisaeta moutnovskia 768-28,... 35 2.2
AP007154_54(AP007154|pid:none) Aspergillus oryzae RIB40 DNA, SC0... 35 2.2
T16840(T16840)hypothetical protein T10E10.4 - Caenorhabditis ele... 35 3.8
FO080306_2(FO080306|pid:none) Caenorhabditis elegans Cosmid T10E... 35 3.8
CR456624_1(CR456624|pid:none) Zebrafish DNA sequence from clone ... 35 3.8
A49175(A49175;PH1570;S32113) Motch B protein - mouse (fragment) ... 34 4.9
BC172642_1(BC172642|pid:none) Synthetic construct Mus musculus c... 34 4.9
CU138540_8(CU138540|pid:none) Zebrafish DNA sequence from clone ... 34 4.9
AF075240_1(AF075240|pid:none) Homo sapiens SLIT1 protein (SLIL2)... 34 4.9
BC162468_1(BC162468|pid:none) Danio rerio jagged 1a, mRNA (cDNA ... 34 6.5
(O88280) RecName: Full=Slit homolog 3 protein; Short=Sl... 34 6.5
AY358298_1(AY358298|pid:none) Homo sapiens clone DNA44804 CSRV31... 34 6.5
EU127454_1(EU127454|pid:none) Homo sapiens mucin 5AC, oligomeric... 34 6.5
(Q7M4S5) RecName: Full=Mucin-5B; Short=MUC-5B; AltName:... 34 6.5
AC116982_41(AC116982|pid:none) Dictyostelium discoideum chromoso... 33 8.4
AF387318_1(AF387318|pid:none) Gallus gallus slit-3 mRNA, partial... 33 8.4
AL844508_104(AL844508|pid:none) Plasmodium falciparum 3D7 chromo... 33 8.4
Y09788_1(Y09788|pid:none) Homo sapiens partial MUC5B gene, exon ... 33 8.4
(Q04721) RecName: Full=Neurogenic locus notch homolog protein 2;... 33 8.4
AF308601_1(AF308601|pid:none) Homo sapiens NOTCH 2 (N2) mRNA, co... 33 8.4
AX357059_1(AX357059|pid:none) Sequence 21 from Patent EP1175909.... 33 8.4
AB112441_1(AB112441|pid:none) Ciona intestinalis Ci-VWFL1 mRNA f... 33 8.4
BC013767_1(BC013767|pid:none) Homo sapiens vasorin, mRNA (cDNA c... 33 8.4
>(Q8T2U0) RecName: Full=Uncharacterized protein DDB_G0275255; Flags:
Precursor; &AC116305_114(AC116305|pid:none)
Length = 289
Score = 104 bits (260), Expect = 3e-21
Identities = 57/165 (34%), Positives = 85/165 (51%), Gaps = 3/165 (1%)
Frame = +1
Query: 76 TSESYGFISNSGTTCIQAKGCPIYKFSKINTNETTNFATYTEPYTSCVPLLDKDWFSSRL 255
+++ Y ++GT C + CP + +N + T ++PY V LD W SS+
Sbjct: 122 STDKYYMFGDNGTRC-KTSPCPNIVAALLNVHSQEIINTISQPYEKNVGFLDSVWLSSKN 180
Query: 256 IKTDTSFYVGSIVLGSISKGELTISSIFVNTEDPALPCPENP--SCPGGKIQTFTRSVNR 429
I++D +G G+I G ++IS+ F+ DP + CPE P C G T++R NR
Sbjct: 181 IRSDDFGLIGQ---GTIKNGVISISNSFIYLPDPPIKCPELPLLKCVEGNSMTYSRDENR 237
Query: 430 CPIFNKCVNRGVCHLGIPHCPVGYTSYSLQSAP-NGCLKYYCDPD 561
C + +C GVC L IP C GY S S NGC K++CDP+
Sbjct: 238 CLVSPRCTKFGVCTLSIPLCNKGYRLVSFPSTELNGCPKFFCDPE 282
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,645,958,854
Number of extensions: 34238259
Number of successful extensions: 88249
Number of sequences better than 10.0: 30
Number of HSP's gapped: 87714
Number of HSP's successfully gapped: 32
Length of query: 213
Length of database: 1,732,582,204
Length adjustment: 126
Effective length of query: 87
Effective length of database: 1,058,581,366
Effective search space: 92096578842
Effective search space used: 92096578842
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
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