Dictyostelium discoideum cDNA Clone SSL535

Size:		0.9k
3' sequence:	TS980421
5' sequence:	*
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSL535

---------- ATCATAGAAT GGTATTACCA CCAAGTGATG ATAATAAATC
AAATTCAAAA AATCTTAAAA ATTCCACATC AGAATCATAT GGTTTCATTT
CAAATTCTGG TACTACTTGT ATTCAAGCAA AGGGTTGTCC AATTTATAAG
TTTTCAAAAA TCAATACCAA TGAAACTACT AATTTTGCAA CCTATACTGA
ACCTTATACA TCCTGTGTTC CATTATTGGA TAAAGATTGG TTCTCCTCGA
GATTAATTAA AACTGATACT TCTTTTTATG TTGGTTCCAT TGTCTTGGGA
TCAATTTCAA AGGGTGAATT AACAATTTCA AGTATTTTTG TTAATACAGA
AGATCCAGCC TTACCATGCC CAGAAAATCC AAGTTGTCCT GGTGGTAAAA
TTCAAACTTT TACTCGTTCC GTTAATCGTT GTCCAATCTT TAACAAATGC
GTAAATAGAG GTGTCTGTCA TCTTGGAATT CCTCATTGTC CAGTTGGTTA
TACTTCTTAT TCTTTACAAT CTGCTCCAAA TGGTTGTTTA AAGTATTATT
GTGATCCTGA TTCTTTACCA AATCCATCAA CTGTTTTAGG TCCTTAAAAT
AAAAATAAAA ATGAAAATAT GACTTTTTAT TTTTTAAAAT C

Translated Amino Acid Sequence SSL535

---HRMVLPPSDDNKSNSKNLKNSTSESYGFISNSGTTCIQAKGCPIYKFSKINTNETTN
FATYTEPYTSCVPLLDKDWFSSRLIKTDTSFYVGSIVLGSISKGELTISSIFVNTEDPAL
PCPENPSCPGGKIQTFTRSVNRCPIFNKCVNRGVCHLGIPHCPVGYTSYSLQSAPNGCLK
YYCDPDSLPNPSTVLGP*nknknenmtfyflk

Homology SSL535 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSL535 (SSL535Q) /CSM/SS/SSL5-B/SSL535Q.Seq.d/                       1158   0.0
SSK179 (SSK179Q) /CSM/SS/SSK1-D/SSK179Q.Seq.d/                       1158   0.0
SSG139 (SSG139Q) /CSM/SS/SSG1-B/SSG139Q.Seq.d/                       1146   0.0
SSA616 (SSA616Q) /CSM/SS/SSA6-A/SSA616Q.Seq.d/                       1146   0.0
SSI764 (SSI764Q) /CSM/SS/SSI7-C/SSI764Q.Seq.d/                       1118   0.0
SSH329 (SSH329Q) /CSM/SS/SSH3-B/SSH329Q.Seq.d/                       1116   0.0
SSA776 (SSA776Q) /CSM/SS/SSA7-D/SSA776Q.Seq.d/                       1100   0.0
SSD577 (SSD577Q) /CSM/SS/SSD5-D/SSD577Q.Seq.d/                       1074   0.0
SSI633 (SSI633Q) /CSM/SS/SSI6-B/SSI633Q.Seq.d/                       1065   0.0
SLD118 (SLD118Q) /CSM/SL/SLD1-A/SLD118Q.Seq.d/                       1061   0.0

Homology SSL535 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU038830) Dictyostelium discoideum slug cDNA, clone SSL535.     1160   0.0    1
(C91406) Dictyostelium discoideum slug cDNA, clone SSK179.       1160   0.0    1
(C90048) Dictyostelium discoideum slug cDNA, clone SSG139.       1148   0.0    1
(C89679) Dictyostelium discoideum slug cDNA, clone SSA616.       1148   0.0    1
(C90297) Dictyostelium discoideum slug cDNA, clone SSI764.       1120   0.0    1
(AU038146) Dictyostelium discoideum slug cDNA, clone SSH329.     1118   0.0    1
(AU037028) Dictyostelium discoideum slug cDNA, clone SSA776.     1102   0.0    1
(C90498) Dictyostelium discoideum slug cDNA, clone SSI633.       1066   0.0    1
(AU052304) Dictyostelium discoideum slug cDNA, clone SLD118.     1063   0.0    1
(AU038182) Dictyostelium discoideum slug cDNA, clone SSH380.     1033   0.0    1

Homology SSL535 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q8T2U0) RecName: Full=Uncharacterized protein DDB_G0275255; Fla...   104   3e-21
AC116305_115(AC116305|pid:none) Dictyostelium discoideum chromos...    94   4e-18
AC116921_3(AC116921|pid:none) Dictyostelium discoideum chromosom...    87   6e-16
AC116305_112(AC116305|pid:none) Dictyostelium discoideum chromos...    85   2e-15
EU854565_1(EU854565|pid:none) Danio rerio fibrillin 4 (fbn4) mRN...    41   0.037
JI167510_1(JI167510|pid:none) TSA: Ascaris suum ASCF_2626_2469 m...    36   1.6
JI167352_1(JI167352|pid:none) TSA: Ascaris suum ASCF_2503_2527 m...    36   1.6
CP002529_293(CP002529|pid:none) Vulcanisaeta moutnovskia 768-28,...    35   2.1
AP007154_54(AP007154|pid:none) Aspergillus oryzae RIB40 DNA, SC0...    35   2.1
T16840(T16840)hypothetical protein T10E10.4 - Caenorhabditis ele...    35   3.5

Homology SSL535 vs Genome