Homology SSL535 vs DNA
Query= SSL535 (SSL535Q) /CSM/SS/SSL5-B/SSL535Q.Seq.d/
(641 letters)
Database: ddbj_A
124,079,491 sequences; 117,728,717,442 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU038830) Dictyostelium discoideum slug cDNA, clone SSL535. 1160 0.0 1
(C91406) Dictyostelium discoideum slug cDNA, clone SSK179. 1160 0.0 1
(C90048) Dictyostelium discoideum slug cDNA, clone SSG139. 1148 0.0 1
(C89679) Dictyostelium discoideum slug cDNA, clone SSA616. 1148 0.0 1
(C90297) Dictyostelium discoideum slug cDNA, clone SSI764. 1120 0.0 1
(AU038146) Dictyostelium discoideum slug cDNA, clone SSH329. 1118 0.0 1
(AU037028) Dictyostelium discoideum slug cDNA, clone SSA776. 1102 0.0 1
(C90498) Dictyostelium discoideum slug cDNA, clone SSI633. 1066 0.0 1
(AU052304) Dictyostelium discoideum slug cDNA, clone SLD118. 1063 0.0 1
(AU038182) Dictyostelium discoideum slug cDNA, clone SSH380. 1033 0.0 1
(AU038887) Dictyostelium discoideum slug cDNA, clone SSM104. 995 0.0 1
(C92182) Dictyostelium discoideum slug cDNA, clone SSD196. 957 0.0 1
(C94051) Dictyostelium discoideum slug cDNA, clone SSG332. 890 0.0 1
(AU038232) Dictyostelium discoideum slug cDNA, clone SSH448. 888 0.0 1
(AU037578) Dictyostelium discoideum slug cDNA, clone SSD811. 878 0.0 1
(C93752) Dictyostelium discoideum slug cDNA, clone SSL678. 787 0.0 4
(AU052515) Dictyostelium discoideum slug cDNA, clone SLD453. 854 0.0 1
(AU076348) Dictyostelium discoideum slug cDNA, clone SSA628. 769 0.0 1
(AU038115) Dictyostelium discoideum slug cDNA, clone SSH288. 769 0.0 1
(AU037767) Dictyostelium discoideum slug cDNA, clone SSE268. 749 0.0 1
(BJ328247) Dictyostelium discoideum cDNA clone:dda23a17, 5' ... 618 e-173 1
(C91941) Dictyostelium discoideum slug cDNA, clone SSC512. 589 e-164 1
(AU037104) Dictyostelium discoideum slug cDNA, clone SSB454. 494 e-148 2
(C24630) Dictyostelium discoideum slug cDNA, clone SL-X028. 537 e-148 1
(AU072170) Dictyostelium discoideum slug cDNA, clone SSD577. 476 e-130 1
(AU071959) Dictyostelium discoideum slug cDNA, clone SSC833. 476 e-130 1
(C25638) Dictyostelium discoideum slug cDNA, clone SSA831. 379 e-128 3
(AU072197) Dictyostelium discoideum slug cDNA, clone SSD646. 466 e-127 1
(AU073901) Dictyostelium discoideum slug cDNA, clone SSI671. 452 e-123 1
(BJ363893) Dictyostelium discoideum cDNA clone:ddc29b04, 5' ... 444 e-120 1
(AU072639) Dictyostelium discoideum slug cDNA, clone SSA446. 440 e-119 1
(C92138) Dictyostelium discoideum slug cDNA, clone SSD137. 416 e-112 1
(BJ362212) Dictyostelium discoideum cDNA clone:ddc20e21, 5' ... 404 e-108 1
(BJ388326) Dictyostelium discoideum cDNA clone:dds9a05, 5' e... 402 e-108 1
(AU037475) Dictyostelium discoideum slug cDNA, clone SSD681. 373 7e-99 1
(AU073609) Dictyostelium discoideum slug cDNA, clone SSH657. 335 1e-87 1
(AU071460) Dictyostelium discoideum slug cDNA, clone SSB557. 119 2e-22 1
(AU037443) Dictyostelium discoideum slug cDNA, clone SSD646. 98 6e-16 1
(GR571951) CBTG393.g1 CBTG Dictyostelium purpureum 12 hr veg... 58 5e-04 1
(EU115624) Dictyostelium discoideum Ddi2305 RNA, complete se... 52 0.031 1
(AC018358) Homo sapiens 3 BAC RP11-333B11 (Roswell Park Canc... 50 0.12 1
(FV536107) Modified Microbial Nucleic Acid. 36 0.23 2
(FV536106) Modified Microbial Nucleic Acid. 36 0.23 2
(AY612006) Atractaspis micropholis voucher IPMB J283 cytochr... 48 0.48 1
(FV536167) Modified Microbial Nucleic Acid. 48 0.48 1
(FV536166) Modified Microbial Nucleic Acid. 48 0.48 1
(AP001777) Homo sapiens genomic DNA, chromosome 18q22 clone:... 40 0.82 4
(FV536161) Modified Microbial Nucleic Acid. 46 1.9 1
(FV536160) Modified Microbial Nucleic Acid. 46 1.9 1
(FV536027) Modified Microbial Nucleic Acid. 46 1.9 1
(FV536026) Modified Microbial Nucleic Acid. 46 1.9 1
(CU468585) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.9 1
(EJ999188) 1093025007924 Global-Ocean-Sampling_GS-30-02-01-1... 46 1.9 1
(DH395716) Oryzias latipes Fosmid clone:GOLWFno794_h07, forw... 46 1.9 1
(BH794587) ME_MBa0003C03r Manihot esculenta Manihot esculent... 46 1.9 1
(CP001666) Clostridium ljungdahlii DSM 13528, complete genome. 46 1.9 1
(AC069563) Mus musculus strain C57BL/6J chromosome 9 clone r... 36 2.6 5
(CU914570) Phaseolus vulgaris sequence from BAC clone pva1-4... 44 2.7 5
(AC188527) Canis Familiaris chromosome 10, clone XX-29J8, co... 34 2.8 7
(GS412258) MG_Ba0034C11.R MG_Ba Mimulus guttatus genomic 3',... 28 3.0 4
(FV536295) Modified Microbial Nucleic Acid. 32 3.1 2
(FV536294) Modified Microbial Nucleic Acid. 32 3.1 2
(AC169968) Bos taurus clone CH240-229E22, WORKING DRAFT SEQU... 34 3.7 2
(AC197250) Zea mays chromosome 3 clone CH201-281L5; ZMMBBc02... 40 4.3 5
(EE899604) B19891A FFB Bos taurus cDNA clone B1989 3', mRNA ... 34 4.9 2
(CP000881) Hemiselmis andersenii chromosome 1, complete sequ... 34 6.1 6
(DQ681421) Synthetic construct Francisella tularensis clone ... 44 7.5 1
(CT005236) Pan troglodytes chromosome X clone RP43-010E09 ma... 44 7.5 1
(FV536429) Modified Microbial Nucleic Acid. 44 7.5 1
(FV536428) Modified Microbial Nucleic Acid. 44 7.5 1
(FV536381) Modified Microbial Nucleic Acid. 44 7.5 1
(FV536380) Modified Microbial Nucleic Acid. 44 7.5 1
(FV536307) Modified Microbial Nucleic Acid. 44 7.5 1
(FV536306) Modified Microbial Nucleic Acid. 44 7.5 1
(FV536071) Modified Microbial Nucleic Acid. 44 7.5 1
(FV536070) Modified Microbial Nucleic Acid. 44 7.5 1
(DQ371188) Diaphanes nubilus 16S ribosomal RNA gene, partial... 44 7.5 1
(AC117406) Homo sapiens X BAC CTD-2037D5 (CalTech Human BAC ... 44 7.5 1
(AC002349) Homo sapiens Xp22 PAC RPCI1-167A22 (from Roswell ... 44 7.5 1
(AC156820) Bos taurus clone CH240-60L9, WORKING DRAFT SEQUEN... 44 7.5 1
(AC103474) Rattus norvegicus clone CH230-14D20, WORKING DRAF... 44 7.5 1
(AC096410) Rattus norvegicus clone CH230-78A20, WORKING DRAF... 44 7.5 1
(AC079314) Homo sapiens chromosome Xp clone RP11-386I20, WOR... 44 7.5 1
(AC238403) Solanum tuberosum chromosome 5 clone RH198L17, **... 44 7.5 1
(AC238055) Solanum tuberosum chromosome 5 clone RH055F06, **... 44 7.5 1
(AC177655) Strongylocentrotus purpuratus clone R3-1018A08, W... 44 7.5 1
(AC167049) Bos taurus clone CH240-191E1, WORKING DRAFT SEQUE... 44 7.5 1
(AC004469) Homo sapiens clone CTB-58E15, WORKING DRAFT SEQUE... 44 7.5 1
(FI819866) SIR-59B19TF Sisymbrium irio BAC library SIR Sisym... 44 7.5 1
(ET094801) QM0AAA21DA06FM1 CCL1 Citrus clementina genomic cl... 44 7.5 1
(ER145413) 1095522121121 Global-Ocean-Sampling_GS-33-01-01-1... 44 7.5 1
(EK421732) 1095515512827 Global-Ocean-Sampling_GS-31-01-01-1... 44 7.5 1
(EI377210) POTD191TR Solanum tuberosum RHPOTKEY BAC ends Sol... 44 7.5 1
(CZ698552) OC__Ba0012P14.r OC__Ba Oryza coarctata genomic cl... 44 7.5 1
(BH763984) BMBAC321A04SP6_PSU Brugia malayi Genomic Bac Libr... 44 7.5 1
(AG387127) Mus musculus molossinus DNA, clone:MSMg01-201K09.... 44 7.5 1
(EH014765) USDA-FP_187433 Lysiphlebus testaceipes adult whol... 44 7.5 1
(AU072122) Dictyostelium discoideum slug cDNA, clone SSD467. 44 7.5 1
(BW445570) Ciona intestinalis cDNA, clone:cijv422f21, 5'end,... 44 7.5 1
(BW272220) Ciona intestinalis cDNA, clone:cign061o17, 5' end... 44 7.5 1
(BJ419644) Dictyostelium discoideum cDNA clone:ddv36a24, 5' ... 44 7.5 1
(CP001633) Francisella tularensis subsp. tularensis NE061598... 44 7.5 1
(CP000915) Francisella tularensis subsp. mediasiatica FSC147... 44 7.5 1
(CP000803) Francisella tularensis subsp. holarctica FTNF002-... 44 7.5 1
(CP000742) Methanococcus vannielii SB, complete genome. 44 7.5 1
(CP000608) Francisella tularensis subsp. tularensis WY96-341... 44 7.5 1
(CP000439) Francisella tularensis subsp. novicida U112, comp... 44 7.5 1
(CP000437) Francisella tularensis subsp. holarctica OSU18, c... 44 7.5 1
(AM286280) Francisella tularensis subsp. tularensis strain F... 44 7.5 1
(AM233362) Francisella tularensis subsp. holarctica LVS comp... 44 7.5 1
(AJ749949) Francisella tularensis subsp. tularensis SCHU S4 ... 44 7.5 1
(AC211346) Pongo abelii BAC clone CH276-340B19 from chromoso... 32 9.5 7
>(AU038830) Dictyostelium discoideum slug cDNA, clone SSL535.
Length = 631
Score = 1160 bits (585), Expect = 0.0
Identities = 585/585 (100%)
Strand = Plus / Plus
Query: 11 atcatagaatggtattaccaccaagtgatgataataaatcaaattcaaaaaatcttaaaa 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcatagaatggtattaccaccaagtgatgataataaatcaaattcaaaaaatcttaaaa 60
Query: 71 attccacatcagaatcatatggtttcatttcaaattctggtactacttgtattcaagcaa 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attccacatcagaatcatatggtttcatttcaaattctggtactacttgtattcaagcaa 120
Query: 131 agggttgtccaatttataagttttcaaaaatcaataccaatgaaactactaattttgcaa 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agggttgtccaatttataagttttcaaaaatcaataccaatgaaactactaattttgcaa 180
Query: 191 cctatactgaaccttatacatcctgtgttccattattggataaagattggttctcctcga 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cctatactgaaccttatacatcctgtgttccattattggataaagattggttctcctcga 240
Query: 251 gattaattaaaactgatacttctttttatgttggttccattgtcttgggatcaatttcaa 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gattaattaaaactgatacttctttttatgttggttccattgtcttgggatcaatttcaa 300
Query: 311 agggtgaattaacaatttcaagtatttttgttaatacagaagatccagccttaccatgcc 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agggtgaattaacaatttcaagtatttttgttaatacagaagatccagccttaccatgcc 360
Query: 371 cagaaaatccaagttgtcctggtggtaaaattcaaacttttactcgttccgttaatcgtt 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagaaaatccaagttgtcctggtggtaaaattcaaacttttactcgttccgttaatcgtt 420
Query: 431 gtccaatctttaacaaatgcgtaaatagaggtgtctgtcatcttggaattcctcattgtc 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtccaatctttaacaaatgcgtaaatagaggtgtctgtcatcttggaattcctcattgtc 480
Query: 491 cagttggttatacttcttattctttacaatctgctccaaatggttgtttaaagtattatt 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cagttggttatacttcttattctttacaatctgctccaaatggttgtttaaagtattatt 540
Query: 551 gtgatcctgattctttaccaaatccatcaactgttttaggtcctt 595
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtgatcctgattctttaccaaatccatcaactgttttaggtcctt 585
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 124079491
Number of Hits to DB: 888,981,997
Number of extensions: 52497094
Number of successful extensions: 4335160
Number of sequences better than 10.0: 112
Length of query: 641
Length of database: 117,728,717,442
Length adjustment: 24
Effective length of query: 617
Effective length of database: 114,750,809,658
Effective search space: 70801249558986
Effective search space used: 70801249558986
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home