Dictyostelium discoideum cDNA Clone SSL489

Size:		0.8k
3' sequence:	TS980424
5' sequence:	TS981208
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSL489

GTGGTACACT TGAGTCAATT TATAATTTTT TATGAAAAAA TTATATTAAA
TGGTAATAAT ATTTCAAATT ATTTAGGTAA TGATAATAGT AATAGTAGTG
GTAATAATAG TTCAAATAGT AGTAAAAATA AAACAATATT TTCGAAATCA
ATTAATAATT TTAGATATGA TATATTAGAA TATTTAATTG AAAGAACTGG
TTTTATATCA ACTACTGCAA TATTATCAGA TTTAATTCAT TTAATAATTT
CAAATGGTGA TTATCAAACA ATTGAATATT TATTTAAAAA TCATTTAGAT
CTATTCACAC AAAATCAACC AATAACATTA AAACCAGATT A---------
-ATCAAATAT CAATCATTTT CAATCTTTTG AATTTAAAAA CATTGAATTA
GTATATAATG GAGTTATCAA TAATAAAAAC TCTGATAAAA TTATTAAATT
ATTAAATAAT ATAAAAAATC ATTTTTATCC TCCATCTCCT CCAACTAATG
ATATAATTTT TAAAAAACAA AAATATAATA NCCTTTTTTA ATTAACTCTT
TATAAAAAAA AAAAAAAAAA AAAACAATAA TAAAATTAAT ATCAAAATAT
TAAATTATTT ATATA

Translated Amino Acid Sequence SSL489

VVHLSQFIIFYEKIILNGNNISNYLGNDNSNSSGNNSSNSSKNKTIFSKSINNFRYDILE
YLIERTGFISTTAILSDLIHLIISNGDYQTIEYLFKNHLDLFTQNQPITLKPD---

---SNINHFQSFEFKNIELVYNGVINNKNSDKIIKLLNNIKNHFYPPSPPTNDIIFKKQK
YNXLF*ltlykkkkkkkq**n*yqniklfi

Homology SSL489 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSL489 (SSL489Q) /CSM/SS/SSL4-D/SSL489Q.Seq.d/                        769   0.0
SSL401 (SSL401Q) /CSM/SS/SSL4-A/SSL401Q.Seq.d/                        454   e-127
VSK308 (VSK308Q) /CSM/VS/VSK3-A/VSK308Q.Seq.d/                         50   4e-05
VSF750 (VSF750Q) /CSM/VS/VSF7-C/VSF750Q.Seq.d/                         48   2e-04
VHI774 (VHI774Q) /CSM/VH/VHI7-D/VHI774Q.Seq.d/                         48   2e-04
VFH820 (VFH820Q) /CSM/VF/VFH8-A/VFH820Q.Seq.d/                         48   2e-04
SFJ161 (SFJ161Q) /CSM/SF/SFJ1-C/SFJ161Q.Seq.d/                         48   2e-04
SFC584 (SFC584Q) /CSM/SF/SFC5-D/SFC584Q.Seq.d/                         48   2e-04
CFI357 (CFI357Q) /CSM/CF/CFI3-C/CFI357Q.Seq.d/                         48   2e-04
AHN423 (AHN423Q) /CSM/AH/AHN4-A/AHN423Q.Seq.d/                         48   2e-04

Homology SSL489 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU074671) Dictyostelium discoideum slug cDNA, clone SSL489.      202   5e-50  2
(AU074629) Dictyostelium discoideum slug cDNA, clone SSL401.      196   2e-46  2
(AU038796) Dictyostelium discoideum slug cDNA, clone SSL489.      100   4e-28  2
(AU038723) Dictyostelium discoideum slug cDNA, clone SSL401.      100   5e-28  2
(AC167484) Bos taurus clone CH240-194A10, WORKING DRAFT SEQU...    40   0.001  2
(EI494897) PV_GBa0112I18.r PV_GBa Phaseolus vulgaris genomic...    40   0.091  2
(AC151637) Dasypus novemcinctus clone VMRC5-14E11, WORKING D...    50   0.12   1
(AC151451) Dasypus novemcinctus clone VMRC5-290I3, WORKING D...    50   0.12   1
(AC121454) Rattus norvegicus clone CH230-326A24, *** SEQUENC...    50   0.12   1
(AC097734) Rattus norvegicus clone CH230-6J2, *** SEQUENCING...    50   0.12   1

Homology SSL489 vs Protein

Sequences producing significant alignments:                      (bits) Value


HQ634144_320(HQ634144|pid:none) Phaeocystis globosa virus 14T, *...    36   1.2
HQ634147_264(HQ634147|pid:none) Phaeocystis globosa virus 12T, *...    36   1.2
CP000733_930(CP000733|pid:none) Coxiella burnetii Dugway 5J108-1...    34   4.5
CP000962_1694(CP000962|pid:none) Clostridium botulinum A3 str. L...    33   7.6
CP002114_1637(CP002114|pid:none) Staphylococcus aureus subsp. au...    33   9.9
AM990992_1782(AM990992|pid:none) Staphylococcus aureus subsp. au...    33   9.9
AJ938182_1605(AJ938182|pid:none) Staphylococcus aureus RF122 com...    33   9.9
BA000033_1688(BA000033|pid:none) Staphylococcus aureus subsp. au...    33   9.9
AP009324_1732(AP009324|pid:none) Staphylococcus aureus subsp. au...    33   9.9

Homology SSL489 vs Genome