Dictyostelium discoideum cDNA Clone SSK866

Size:		0.8k
3' sequence:	TM980302
5' sequence:	*
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSK866

---------- GATGCAAATA AAGTAAAATT CTTCTTTGGT AAAACTGCAC
TGGAGAATCA TTTGAATACA ACAAAGGTGA ACTGTAAGAT TCACCAATGG
TGATAAATGG AATGATAAAT TCATGTCATG TTTGGTTGGT TCAAATGTTA
GATGTAACAT TTGGGAGCAT AATGAAATTG ATACTCCAAC TCCAGGAAAA
TTCCAAGAAT TGGCTCAAGG CAGTACAAAC AATGATTTAA CCTCAATAAA
TGGTCTTTCA AAGTTCCAAG TCTTACCAGG AGCTTTTCAA TGGGCAGTTG
ATGTTAAAAT TGTCAACAAA GTTAATTCAA CTGCTGGTTC ATATGAAATG
ACCATTACTC CATACCAAGT TGATAAGGTT GCTTGCAAAG ATGGTGATGA
CTTTGTTCAA TTGCCAATTC CAAAACTTAC TCCACCAGAT TCTGAAATTG
TTAGCCATTT AACAGTTCGT CAAACACATA CACCATATGA CTATGTTGTA
AATGGAAGTG TTTACTTTAA ATACTCCCCA ACAACTGGCC AAGTTACAGT
TATTAAAAAA GATGAGACAT TCCCAAAGAA TATGACTGTT ACACAAGATG
ATAATACATC TTTCATCTTT AACTTAAACT CTGAAAAATA AAACAATATG
TTTTTTTTTC TCTTTAAGAA AACTTTAAAT AATAAAATTA TGAATTTCAG
AAATTAAAAA AAAAAA

Translated Amino Acid Sequence SSK866

---mqik*nsslvklhwrii*iqqr*TVRFTNGDKWNDKFMSCLVGSNVRCNIWEHNEID
TPTPGKFQELAQGSTNNDLTSINGLSKFQVLPGAFQWAVDVKIVNKVNSTAGSYEMTITP
YQVDKVACKDGDDFVQLPIPKLTPPDSEIVSHLTVRQTHTPYDYVVNGSVYFKYSPTTGQ
VTVIKKDETFPKNMTVTQDDNTSFIFNLNSEK*nnmffflfkktlnnkimnfrn*kkk

Homology SSK866 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSK866 (SSK866Q) /CSM/SS/SSK8-C/SSK866Q.Seq.d/                       1324   0.0
SSK494 (SSK494Q) /CSM/SS/SSK4-D/SSK494Q.Seq.d/                       1273   0.0
SSC587 (SSC587Q) /CSM/SS/SSC5-D/SSC587Q.Seq.d/                       1265   0.0
AHG682 (AHG682Q) /CSM/AH/AHG6-D/AHG682Q.Seq.d/                       1247   0.0
VHG542 (VHG542Q) /CSM/VH/VHG5-B/VHG542Q.Seq.d/                       1245   0.0
VHG402 (VHG402Q) /CSM/VH/VHG4-A/VHG402Q.Seq.d/                       1245   0.0
VFG405 (VFG405Q) /CSM/VF/VFG4-A/VFG405Q.Seq.d/                       1245   0.0
AHH433 (AHH433Q) /CSM/AH/AHH4-B/AHH433Q.Seq.d/                       1245   0.0
AHE127 (AHE127Q) /CSM/AH/AHE1-B/AHE127Q.Seq.d/                       1245   0.0
AHB807 (AHB807Q) /CSM/AH/AHB8-A/AHB807Q.Seq.d/                       1245   0.0

Homology SSK866 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(C94348) Dictyostelium discoideum slug cDNA, clone SSK866.       1267   0.0    2
(C94392) Dictyostelium discoideum slug cDNA, clone SSK613.       1124   0.0    2
(C93031) Dictyostelium discoideum slug cDNA, clone SSF496.       1124   0.0    2
(C92980) Dictyostelium discoideum slug cDNA, clone SSF409.       1124   0.0    2
(C92927) Dictyostelium discoideum slug cDNA, clone SSF771.       1124   0.0    3
(C92519) Dictyostelium discoideum slug cDNA, clone SSE517.       1124   0.0    2
(C91961) Dictyostelium discoideum slug cDNA, clone SSC587.       1124   0.0    4
(C91339) Dictyostelium discoideum slug cDNA, clone SSK494.       1124   0.0    4
(C91121) Dictyostelium discoideum slug cDNA, clone SSJ652.       1124   0.0    3
(C90176) Dictyostelium discoideum slug cDNA, clone SSI186.       1124   0.0    5

Homology SSK866 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P54657) RecName: Full=Calcium-dependent cell adhesion molecule ...   384   e-110
U20997_1(U20997|pid:none) Dictyostelium discoideum putative 25 k...   345   9e-99
AC116551_17(AC116551|pid:none) Dictyostelium discoideum chromoso...    96   2e-18
AJ575138_1(AJ575138|pid:none) Sordaria macrospora app gene for a...    58   5e-07
BX571864_113(BX571864|pid:none) Photorhabdus luminescens subsp. ...    54   5e-06
FN545234_29(FN545234|pid:none) Arsenophonus nasoniae whole genom...    43   0.016
CP001719_962(CP001719|pid:none) Methanobrevibacter ruminantium M...    39   0.18
(A4YIG5) RecName: Full=Cysteinyl-tRNA synthetase;          EC=6....    34   5.8
CU207366_3569(CU207366|pid:none) Gramella forsetii KT0803 comple...    34   7.6
BA000026_784(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, c...    33   9.9

Homology SSK866 vs Genome