Dictyostelium discoideum cDNA Clone SSK837

Size:		651
3' sequence:	TM980226
5' sequence:	-
Whole insert?:	Y
Accession #:	
Remarks:	*

Sequence SSK837

ATTTATAACA AATATAAAAC AAAAATGAAT AAATTCATTA TTGGTTTCTT
TTTATGTTTA ACTGTTTTTT TAACCTTTGT AAATAGTTCA GAAATTGATC
ATCAATACTC ACTCACAAGT AGTATTAATG GAAGTAGCAG TGGTGTAAGT
AATTCAACAG ATAACACTGG TTGTGGTGAA TACACTTCAT GTGGTGATTG
TAGAGAAGAT AAAGGATGTG TTTGGTGTGG ATCAGAAGGT ATTTGCACTG
AAGGTACATT CTATGGTACT AAACCATTAA ATATCAATGG TGCCTGTAAA
GATTTCATGT GGATGCAATG TAAAATTCAA GGTCGTTGGG CAATTTTAAT
TGCTGCTGGT GGTGCCTTCT TAATTATTGT CTTCTTCTTT ATTTGCCTTT
GTTGTTGTTG TTGTAGAAGA AAGAAAGATA AACACTATCA TAACATTCAA
GATGATGAAA CTGAACGTTT GGTTTCTCGT ACTCCAATCA CTGATAGACG
TAGAGATGAA ATGAGAGCTA AATGGGGTAT TGGTGCTAAA AATAACAACA
ACAGCTCAAG TTACCAAAGT GATTCATGGA GATAATCTAG TAAAATATAA
TTCCAAATTT ATAATAATAA ATAATATAAT ATAATATAAT AATAAAAAAA
A

Translated Amino Acid Sequence SSK837

IYNKYKTKMNKFIIGFFLCLTVFLTFVNSSEIDHQYSLTSSINGSSSGVSNSTDNTGCGE
YTSCGDCREDKGCVWCGSEGICTEGTFYGTKPLNINGACKDFMWMQCKIQGRWAILIAAG
GAFLIIVFFFICLCCCCCRRKKDKHYHNIQDDETERLVSRTPITDRRRDEMRAKWGIGAK
NNNNSSSYQSDSWR*sski*fqiynnk*ynii***kk

Homology SSK837 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSL667 (SSL667Q) /CSM/SS/SSL6-C/SSL667Q.Seq.d/                       1126   0.0
SSK837 (SSK837Q) /CSM/SS/SSK8-B/SSK837Q.Seq.d/                       1126   0.0
VSF727 (VSF727Q) /CSM/VS/VSF7-B/VSF727Q.Seq.d/                       1110   0.0
VSD385 (VSD385Q) /CSM/VS/VSD3-D/VSD385Q.Seq.d/                       1110   0.0
SLB315 (SLB315Q) /CSM/SL/SLB3-A/SLB315Q.Seq.d/                       1110   0.0
VSF765 (VSF765Q) /CSM/VS/VSF7-C/VSF765Q.Seq.d/                       1096   0.0
VSD765 (VSD765Q) /CSM/VS/VSD7-C/VSD765Q.Seq.d/                       1082   0.0
SSJ375 (SSJ375Q) /CSM/SS/SSJ3-D/SSJ375Q.Seq.d/                       1082   0.0
VSI540 (VSI540Q) /CSM/VS/VSI5-B/VSI540Q.Seq.d/                       1080   0.0
SSE803 (SSE803Q) /CSM/SS/SSE8-A/SSE803Q.Seq.d/                       1059   0.0

Homology SSK837 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU265688) Dictyostelium discoideum vegetative cDNA clone:VS...  1011   0.0    2
(AU263945) Dictyostelium discoideum vegetative cDNA clone:VS...  1011   0.0    2
(AU060741) Dictyostelium discoideum slug cDNA, clone SLB315.     1011   0.0    2
(C94324) Dictyostelium discoideum slug cDNA, clone SSK837.       1011   0.0    2
(AU268853) Dictyostelium discoideum vegetative cDNA clone:VS...   987   0.0    2
(AU264543) Dictyostelium discoideum vegetative cDNA clone:VS...   819   0.0    3
(AU265755) Dictyostelium discoideum vegetative cDNA clone:VS...  1011   0.0    2
(AU033703) Dictyostelium discoideum slug cDNA, clone SLB335.     1011   0.0    2
(AU261506) Dictyostelium discoideum vegetative cDNA clone:VS...  1011   0.0    1
(AU033686) Dictyostelium discoideum slug cDNA, clone SLB315.     1005   0.0    1

Homology SSK837 vs Protein

Sequences producing significant alignments:                      (bits) Value


CR954216_234(CR954216|pid:none) Ostreococcus tauri strain OTTH05...    42   0.032
AX588489_1(AX588489|pid:none) Sequence 364 from Patent WO02083898.     38   0.46
T21694(T21694)hypothetical protein F33C8.1 - Caenorhabditis eleg...    37   0.79
(Q19981) RecName: Full=Putative protein tag-53; Flags: Precursor...    37   0.79
Z69790_3(Z69790|pid:none) Caenorhabditis elegans Cosmid F33C8, c...    37   0.79
AE014134_1537(AE014134|pid:none) Drosophila melanogaster chromos...    37   1.0
AL954359_1(AL954359|pid:none) Zebrafish DNA sequence from clone ...    36   1.3
BC051121_1(BC051121|pid:none) Mus musculus multiple EGF-like-dom...    36   1.7
CR388098_1(CR388098|pid:none) Zebrafish DNA sequence from clone ...    35   2.3
GQ222417_1(GQ222417|pid:none) Bos taurus breed Galloway attracti...    35   3.9

Homology SSK837 vs Genome