<List of Series> <Series: SSK8-A> <Clone: SSK811> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Clone SSK811
Dictyostelium discoideum cDNA Project Home
Size: 0.9k
3' sequence: TMS980302
5' sequence: *
Whole insert?: *
Accession #:
Remarks: *
Sequence SSK811
---------- GCCAATTCCA ATGTTGCACC AGATACTTTC AAAACTCAAT
TAAAACTTGC ACTCAAACGT TTAGTTGCCA AAGGTACTCT TACAATGGTC
AAAGCCAGTT ACAAATTATC AGAAGAAGGT AAAAAGGAAC ACCAAGCCAC
TCTTGGTCCA GTTGCAAAGA AACCAAAAGC CAAGACTACC GCTACTTCAA
CTGAAACAAC TGCCGCTCCA CCAGCTACTC CAACCAAAAA AGCTGCACCA
AAGAAACCAG CTGCTAAAGC TGCTTCAACC TCAACCAAAA CTGCCGCTGC
TAAAAAGAAC TCTGCTAAAG TAACCAAAGC AGTTAGTAAG AAGCCAGCTG
CTAAAAAAGC TCCAAGTAAG AAAGTCGCTG CCAAAAAATA GGTGATTTGT
TTTTAATAGT GTATTTTTTT TTTCTCTCCA TCCATCTTCA TTTATATTCA
ATTATCAAAC TGTAAAAAGT TTTTTTATTT GTATTTATTA TAATTGGGAA
AAAAAAGAAA AGAAAAGAAA AAAAAAAAAA AGAAAACAAA TTATTTATGT
ACATATAAAA AAAAAAAAAG AAAAAGAAA
Translated Amino Acid Sequence SSK811
<All Frames>
---NSNVAPDTFKTQLKLALKRLVAKGTLTMVKASYKLSEEGKKEHQATLGPVAKKPKAK
TTATSTETTAAPPATPTKKAAPKKPAAKAASTSTKTAAAKKNSAKVTKAVSKKPAAKKAP
SKKVAAKK*vicf**cifffspsifiyiqlsnckkffylyll*lgkkrkekkkkkkktny
lctykkkkrkr
Homology SSK811 vs CSM-cDNA
<more CSM info>
Sequences producing significant alignments: (bits) Value
SSK811 (SSK811Q) /CSM/SS/SSK8-A/SSK811Q.Seq.d/ 866 0.0
SSM820 (SSM820Q) /CSM/SS/SSM8-A/SSM820Q.Seq.d/ 858 0.0
SSM145 (SSM145Q) /CSM/SS/SSM1-B/SSM145Q.Seq.d/ 858 0.0
SSJ583 (SSJ583Q) /CSM/SS/SSJ5-D/SSJ583Q.Seq.d/ 858 0.0
SSF687 (SSF687Q) /CSM/SS/SSF6-D/SSF687Q.Seq.d/ 858 0.0
SSF316 (SSF316Q) /CSM/SS/SSF3-A/SSF316Q.Seq.d/ 858 0.0
SLC106 (SLC106Q) /CSM/SL/SLC1-A/SLC106Q.Seq.d/ 858 0.0
SLA738 (SLA738Q) /CSM/SL/SLA7-B/SLA738Q.Seq.d/ 858 0.0
SSC264 (SSC264Q) /CSM/SS/SSC2-C/SSC264Q.Seq.d/ 850 0.0
SLG855 (SLG855Q) /CSM/SL/SLG8-C/SLG855Q.Seq.d/ 842 0.0
Homology SSK811 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
(C94445) Dictyostelium discoideum slug cDNA, clone SSK811. 797 0.0 2
(U50904) Dictyostelium discoideum histone H1 mRNA, complete ... 789 0.0 2
(C91110) Dictyostelium discoideum slug cDNA, clone SSJ583. 789 0.0 2
(C92652) Dictyostelium discoideum slug cDNA, clone SSF687. 789 0.0 2
(AU038922) Dictyostelium discoideum slug cDNA, clone SSM145. 789 0.0 2
(C92613) Dictyostelium discoideum slug cDNA, clone SSF316. 789 0.0 2
(C93419) Dictyostelium discoideum slug cDNA, clone SSM820. 789 0.0 2
(AU033411) Dictyostelium discoideum slug cDNA, clone SLA738. 789 0.0 2
(AU034151) Dictyostelium discoideum slug cDNA, clone SLC106. 789 0.0 2
(C91926) Dictyostelium discoideum slug cDNA, clone SSC264. 781 0.0 2
Homology SSK811 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
(P54671) RecName: Full=Histone H1; &L33457_1(L33457|pid:none) &... 95 2e-18
AJ309169_1(AJ309169|pid:none) Beta vulgaris mRNA for putative li... 43 0.010
AF170089_1(AF170089|pid:none) Nicotiana tabacum histone H1C (H1c... 42 0.013
(P40267) RecName: Full=Histone H1; &S65059(S65059) &U01890_1(U0... 42 0.013
AF544985_1(AF544985|pid:none) Nicotiana tabacum histone H1D (H1d... 40 0.086
AB032542_1(AB032542|pid:none) Nicotiana tabacum A10 mRNA for str... 40 0.086
CP002685_1334(CP002685|pid:none) Arabidopsis thaliana chromosome... 39 0.11
AF527615_1(AF527615|pid:none) Zea mays histone H1-like protein H... 39 0.19
EU959800_1(EU959800|pid:none) Zea mays clone 220060 histone H1 m... 39 0.19
CP001574_268(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 39 0.19
Homology SSK811 vs Genome
<more Genome info>
<List of Series> <Series: SSK8-A> <Clone: SSK811> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Project Home