Homology SSK759 vs Protein
Query= SSK759 (SSK759Q) /CSM/SS/SSK7-C/SSK759Q.Seq.d/
(594 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY812065_1(AY812065|pid:none) Schistosoma japonicum SJCHGC09327 ... 33 9.2
>AY812065_1(AY812065|pid:none) Schistosoma japonicum SJCHGC09327
protein mRNA, partial cds.
Length = 417
Score = 33.1 bits (74), Expect = 9.2
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -3
Query: 274 KSVFIKIKCSLVFLVLI*FNVSFIIDTLYIHSFKWFIKSISFV*ILVCCS 125
KS I + L+LI FN++ IID + ++ +W + +S + + V CS
Sbjct: 155 KSYLIGLNSLSSLLLLILFNITLIIDFILLNEKRWLLYILSILSLTVSCS 204
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 683,968,572
Number of extensions: 9027642
Number of successful extensions: 22275
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21861
Number of HSP's successfully gapped: 1
Length of query: 198
Length of database: 1,732,582,204
Length adjustment: 125
Effective length of query: 73
Effective length of database: 1,063,930,579
Effective search space: 77666932267
Effective search space used: 77666932267
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
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