Dictyostelium discoideum cDNA Clone SSK713

Size:		1.3k
3' sequence:	HM980224
5' sequence:	*
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSK713

---------- ATCTTACGTT TAGATTTAGC TGGTCGTGAT CTCACCGATT
ACATGATGAA AATCTTAACT GAACGTGGTT ACTCATTCAC CACCACTGCC
GAAAGAGAAA TCGTCAGAGA TATCAAAGAG AAATTAGCCT ACGTCGCCCT
CGACTTTGAA GCTGAAATGC AAACTGCTGC CTCATCATCA GCCCTCGAAA
AATCATACGA ATTACCAGAC GGTCAAGTTA TCACCATTGG TAACGAACGT
TTCCGTTGTC CAGAAGCCCT CTTCCAACCA TCATTCTTAG GTATGGAATC
TGCTGGTATC CACGAAACCA CATACAACTC CATCATGAAA TGTGATGTTG
ATATCCGTAA AGATTTATAC GGTAATGTCG TCTTATCAGG TGGTACAACT
ATGTTCCCAG GTATTGCTGA TCGTATGAAC AAAGAATTAA CTGCTTTAGC
ACCATCAACC ATGAAAATTA AAATCATTGC TCCACCAGAA CGTAAATACT
CTGTCTGGAT TGGTGGATCT ATTTTAGCTT CACTCTCAAC TTTCCAACAA
ATGTGGATCT CAAAAGAAGA ATATGATGAA TCTGGTCCAT CAATTGTCCA
CAGAAAATGT TTCTAAATCA TGATGAAAGT GCTTCACATA AAAATAATAA
TAATAATATA ACAATAATAA TATTTAAATG TATAATAAAA TTTAATTACT
TTTTTTTTAA TGGTTGTTGA TCTTTATCCG ACCTTAAAAA AAAAAAAATA
AAAAAAAAAA A

Translated Amino Acid Sequence SSK713

---LRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAAS
SSALEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKD
LYGNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF
QQMWISKEEYDESGPSIVHRKCF*immkvlhikiiiii*q**ylnv**nlitfflmvvdl
yptlkkkk*kkk

Homology SSK713 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSK713 (SSK713Q) /CSM/SS/SSK7-A/SSK713Q.Seq.d/                       1243   0.0
SLH433 (SLH433Q) /CSM/SL/SLH4-B/SLH433Q.Seq.d/                       1243   0.0
SLA636 (SLA636Q) /CSM/SL/SLA6-B/SLA636Q.Seq.d/                       1243   0.0
SLA782 (SLA782Q) /CSM/SL/SLA7-D/SLA782Q.Seq.d/                       1237   0.0
SLB148 (SLB148Q) /CSM/SL/SLB1-B/SLB148Q.Seq.d/                       1227   0.0
SLH863 (SLH863Q) /CSM/SL/SLH8-C/SLH863Q.Seq.d/                       1211   0.0
AFM462 (AFM462Q) /CSM/AF/AFM4-C/AFM462Q.Seq.d/                       1193   0.0
SLH825 (SLH825Q) /CSM/SL/SLH8-B/SLH825Q.Seq.d/                       1146   0.0
SFH484 (SFH484Q) /CSM/SF/SFH4-D/SFH484Q.Seq.d/                       1146   0.0
SLH881 (SLH881Q) /CSM/SL/SLH8-D/SLH881Q.Seq.d/                       1138   0.0

Homology SSK713 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(M14146) D.discoideum actin 15 gene, complete cds.               1243   0.0    1
(AU052282) Dictyostelium discoideum slug cDNA, clone SLA636.     1243   0.0    1
(AU040009) Dictyostelium discoideum slug cDNA, clone SLH433.     1243   0.0    1
(C94022) Dictyostelium discoideum slug cDNA, clone SSK713.       1243   0.0    1
(AU039521) Dictyostelium discoideum slug cDNA, clone SLA782.     1237   0.0    1
(AU039478) Dictyostelium discoideum slug cDNA, clone SLH863.     1211   0.0    1
(DL184440) Protein expression method.                            1195   0.0    1
(DL184438) Protein expression method.                            1195   0.0    1
(BJ346951) Dictyostelium discoideum cDNA clone:dda25l16, 3' ...  1193   0.0    1
(AU039459) Dictyostelium discoideum slug cDNA, clone SLH825.     1146   0.0    1

Homology SSK713 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54H30) RecName: Full=Major actin; AltName: Full=Actin A1; AltN...   400   e-110
X03282_1(X03282|pid:none) dictyostelium discoideum gene for acti...   400   e-110
B23412(B23412)actin 12 - slime mold (Dictyostelium discoideum)        400   e-110
ATDO(A93223;A92871;S67999;A03004)actin - slime mold (Dictyosteli...   396   e-109
(Q553U6) RecName: Full=Putative actin-22;  &AC116305_3(AC116305|...   396   e-109
(P02576) RecName: Full=Actin, plasmodial isoform;  &ATFY(A29044;...   395   e-108
AK369759_1(AK369759|pid:none) Hordeum vulgare subsp. vulgare mRN...   394   e-108
(P07829) RecName: Full=Actin-3; AltName: Full=Actin-3-sub 1;          394   e-108
AF508263_1(AF508263|pid:none) Pyrocystis lunula actin mRNA, comp...   393   e-108
AY615868_1(AY615868|pid:none) Amastigomonas marina actin gene, p...   390   e-107

Homology SSK713 vs Genome