Homology SSJ567 vs Protein
Query= SSJ567 (SSJ567Q) /CSM/SS/SSJ5-C/SSJ567Q.Seq.d/
(728 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
HE575323_1233(HE575323|pid:none) Trypanosoma congolense IL3000 a... 55 3e-06
AC150891_8(AC150891|pid:none) Medicago truncatula chromosome 2 c... 49 3e-04
AK357072_1(AK357072|pid:none) Hordeum vulgare subsp. vulgare mRN... 47 7e-04
AC093956_4(AC093956|pid:none) Oryza sativa (japonica cultivar-gr... 47 0.001
(Q9SF29) RecName: Full=Syntaxin-71; Short=AtSYP71; &AC... 46 0.002
BT123841_1(BT123841|pid:none) Picea sitchensis clone WS04717_N17... 46 0.002
FJ664269_1(FJ664269|pid:none) Annona cherimola syntaxin-71 (SYP7... 45 0.004
BT098344_1(BT098344|pid:none) Soybean clone JCVI-FLGm-23G23 unkn... 45 0.004
DQ653131_1(DQ653131|pid:none) Arabidopsis thaliana clone 0000017... 44 0.006
AL132953_4(AL132953|pid:none) Arabidopsis thaliana DNA chromosom... 44 0.006
AC128638_25(AC128638|pid:none) Medicago truncatula clone mth2-36... 43 0.014
CP000675_2527(CP000675|pid:none) Legionella pneumophila str. Cor... 42 0.024
BT058701_1(BT058701|pid:none) Salmo salar clone Contig3500 Synap... 42 0.040
FN554972_199(FN554972|pid:none) Trypanosoma brucei gambiense DAL... 42 0.040
CP002686_6614(CP002686|pid:none) Arabidopsis thaliana chromosome... 41 0.052
(Q94KK5) RecName: Full=Syntaxin-73; Short=AtSYP73; &AF... 41 0.052
FR824115_32(FR824115|pid:none) Albugo laibachii Nc14, genomic co... 41 0.069
HE612857_73(HE612857|pid:none) Tetrapisispora phaffii CBS 4417 c... 39 0.34
AB260023_1(AB260023|pid:none) Dugesia japonica DjSNAP-25 mRNA fo... 38 0.44
FN554973_1763(FN554973|pid:none) Trypanosoma brucei gambiense DA... 38 0.58
AP010655_1596(AP010655|pid:none) Streptococcus mutans NN2025 DNA... 37 0.76
AE013599_4204(AE013599|pid:none) Drosophila melanogaster chromos... 37 0.76
EF513749_1(EF513749|pid:none) Lateolabrax japonicus SNAP-23 (SNA... 37 0.99
HE605202_367(HE605202|pid:none) Candida parapsilosis strain CDC3... 37 0.99
AK301207_1(AK301207|pid:none) Homo sapiens cDNA FLJ55596 partial... 37 0.99
CP001519_16(CP001519|pid:none) Borrelia sp. SV1 plasmid SV1_lp17... 37 0.99
AY421747_1(AY421747|pid:none) Neoscona nautica tropomyosin mRNA,... 37 0.99
AE014133_319(AE014133|pid:none) Streptococcus mutans UA159, comp... 37 0.99
JI176370_1(JI176370|pid:none) TSA: Ascaris suum ASCF_7578_1088 m... 37 0.99
EF640950_1(EF640950|pid:none) Babesia bovis isolate Veracruz 1 m... 37 1.3
CP001999_561(CP001999|pid:none) Arcobacter nitrofigilis DSM 7299... 37 1.3
AM167555_1(AM167555|pid:none) Dermanyssus gallinae mRNA for trop... 36 1.7
AM270203_11(AM270203|pid:none) Aspergillus niger contig An09c014... 36 1.7
HM008709_163(HM008709|pid:none) Borrelia hermsii DAH plasmid lp1... 36 2.2
AB261082_1(AB261082|pid:none) Entamoeba histolytica gene for EhS... 36 2.2
BC136659_1(BC136659|pid:none) Homo sapiens MAX gene associated, ... 36 2.2
CP001133_280(CP001133|pid:none) Vibrio fischeri MJ11 chromosome ... 36 2.2
(Q8IWI9) RecName: Full=MAX gene-associated protein; AltName: Ful... 36 2.2
AK023360_1(AK023360|pid:none) Homo sapiens cDNA FLJ13298 fis, cl... 36 2.2
CP001621_228(CP001621|pid:none) Mycoplasma mycoides subsp. capri... 36 2.2
JI170541_1(JI170541|pid:none) TSA: Ascaris suum ASCF_4666_1747 m... 35 2.9
CP000968_451(CP000968|pid:none) Candidatus Korarchaeum cryptofil... 35 2.9
FR821779_254(FR821779|pid:none) Staphylococcus aureus subsp. aur... 35 2.9
BX571856_286(BX571856|pid:none) Staphylococcus aureus subsp. aur... 35 2.9
BC095701_1(BC095701|pid:none) Danio rerio im:7145101, mRNA (cDNA... 35 2.9
AP008983_130(AP008983|pid:none) Clostridium phage c-st genomic D... 35 3.8
HQ005780_1(HQ005780|pid:none) Latrodectus hesperus clone CV10 tr... 35 3.8
AF410153_23(AF410153|pid:none) Swinepox virus isolate 17077-99, ... 35 3.8
CP000097_1824(CP000097|pid:none) Synechococcus sp. CC9902, compl... 35 4.9
HE573025_128(HE573025|pid:none) Trypanosoma vivax Y486 annotated... 35 4.9
AM999887_99(AM999887|pid:none) Wolbachia endosymbiont of Culex q... 34 6.4
BC157148_1(BC157148|pid:none) Xenopus tropicalis hypothetical pr... 34 8.4
AE000792_9(AE000792|pid:none) Borrelia burgdorferi B31 plasmid c... 34 8.4
CP000721_938(CP000721|pid:none) Clostridium beijerinckii NCIMB 8... 34 8.4
CP001568_10(CP001568|pid:none) Borrelia burgdorferi Bol26 plasmi... 34 8.4
BX664601_2(BX664601|pid:none) Zebrafish DNA sequence from clone ... 34 8.4
HE605202_325(HE605202|pid:none) Candida parapsilosis strain CDC3... 34 8.4
FQ032826_8(FQ032826|pid:none) Uncultured Sphingobacteria bacteri... 34 8.4
CP001672_1653(CP001672|pid:none) Methylotenera mobilis JLW8, com... 34 8.4
CP001794_2223(CP001794|pid:none) Geobacillus sp. Y412MC61, compl... 34 8.4
FQ312005_739(FQ312005|pid:none) Bacteriovorax marinus SJ genome. 34 8.4
AE016958_3966(AE016958|pid:none) Mycobacterium avium subsp. para... 34 8.4
>HE575323_1233(HE575323|pid:none) Trypanosoma congolense IL3000
annotated genomic contig, chromosome 10.
Length = 323
Score = 55.5 bits (132), Expect = 3e-06
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Frame = +1
Query: 232 KELELQNKQRGGDGSKFIPRDHXQSSSNASGTKQLPDLDN--DDFKELLRNDKQIDGVLD 405
++L++ + R G G P + + G +L D + + K + NDK+I LD
Sbjct: 180 EQLDMLRRPRNGGGGHADPYAGTELQDDTIGGGRLQDNEGTAEAMKSIEANDKKIQNALD 239
Query: 406 QISEQLKITENIANEMGKAATRQGVLLDTLNDKADVLDEKLENINIRLGKMIKDIRKADR 585
+S+ + N+A EMG Q LD+ EKL N+N+RL K++K+ R A
Sbjct: 240 VVSKGVSRLHNLALEMGGQIEMQNKRLDSTEQVMTDQLEKLHNLNMRLKKLLKETRPASC 299
Query: 586 F 588
F
Sbjct: 300 F 300
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,364,165,509
Number of extensions: 21514612
Number of successful extensions: 69527
Number of sequences better than 10.0: 62
Number of HSP's gapped: 69407
Number of HSP's successfully gapped: 62
Length of query: 242
Length of database: 1,732,582,204
Length adjustment: 128
Effective length of query: 114
Effective length of database: 1,047,882,940
Effective search space: 119458655160
Effective search space used: 119458655160
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
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