<List of Series> <Series: SSJ1-D> <Clone: SSJ189> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Clone SSJ189
Dictyostelium discoideum cDNA Project Home
Size: 481
3' sequence: MY980106
5' sequence: -
Whole insert?: Y
Accession #:
Remarks: *
Sequence SSJ189
GGGTTATCCA TTGGTTAAAT TTATGGTTGG ATTATTTCAA AGGTTTTATC
CGGGATCATT CCCAAAATGT TTAATTTTAA ATGCCCCTTG GGTCTTTATG
GGAATTTGGC ATTTCCTCAA ACATTGGTTG GATCCAAATC CCGCTTCAAA
AGTTTCTTTT GTCAAAACTA AACAATTGGG TGATTATATT CCAAAAGGTC
AATTAGAAAG TTCTTATGGT GGAACAAGTA CATTTAAATA TACTTATGAA
GGAAAAGAAG TAAAGTAAAA AAAAAAAAAA AAAAAAAAAA AAAAAATATT
TACTTTTAAA ATATATAAAT TGTAATAACA ACAAGAACAA CAACAATAAC
AATAACAATA ATAATTTCAA AACCAAAAAA AAACTTTATC CTTCAATTAC
CGAAATCTCC ACTTTTAATT ATTTTTTTTT TTGTTTAAAA AAAATAAATA
AATAAATAAA TGTATATATA ATTTCTTAAA A
Translated Amino Acid Sequence SSJ189
<All Frames>
GYPLVKFMVGLFQRFYPGSFPKCLILNAPWVFMGIWHFLKHWLDPNPASKVSFVKTKQLG
DYIPKGQLESSYGGTSTFKYTYEGKEVK*kkkkkkkkkiftfkiykl**qqeqqq*q*q*
*fqnqkktlsfnyrnlhf*lffflfkknk*inkciynflk
Homology SSJ189 vs CSM-cDNA
<more CSM info>
Sequences producing significant alignments: (bits) Value
SSJ189 (SSJ189Q) /CSM/SS/SSJ1-D/SSJ189Q.Seq.d/ 527 e-149
SSB584 (SSB584Q) /CSM/SS/SSB5-D/SSB584Q.Seq.d/ 410 e-114
SSE832 (SSE832Q) /CSM/SS/SSE8-B/SSE832Q.Seq.d/ 387 e-106
VSD357 (VSD357Q) /CSM/VS/VSD3-C/VSD357Q.Seq.d/ 349 2e-95
FC-IC0515 (FC-IC0515Q) /CSM/FC-IC/FC-IC0515Q.Seq.d/ 337 9e-92
FC-IC0335 (FC-IC0335Q) /CSM/FC-IC/FC-IC0335Q.Seq.d/ 337 9e-92
SSF257 (SSF257Q) /CSM/SS/SSF2-C/SSF257Q.Seq.d/ 36 0.47
VFM590 (VFM590Q) /CSM/VF/VFM5-D/VFM590Q.Seq.d/ 34 1.9
VFM325 (VFM325Q) /CSM/VF/VFM3-B/VFM325Q.Seq.d/ 34 1.9
VFG312 (VFG312Q) /CSM/VF/VFG3-A/VFG312Q.Seq.d/ 34 1.9
Homology SSJ189 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
AC117082|AC117082.2 Dictyostelium discoideum chromosome 2 ma... 410 e-129 4
BZ389512|BZ389512.1 EINAJ30TF EI_10_12_KB Entamoeba invadens... 34 0.086 2
BZ399331|BZ399331.1 EINAV49TF EI_10_12_KB Entamoeba invadens... 34 0.086 2
BX005353|BX005353.5 Zebrafish DNA sequence *** SEQUENCING IN... 40 0.13 3
AP001666|AP001666.1 Homo sapiens genomic DNA, chromosome 21q... 46 0.45 1
BS000023|BS000023.1 Pan troglodytes chromosome 22 clone:PTB-... 46 0.45 1
AP001344|AP001344.1 Homo sapiens genomic DNA, chromosome 21q... 46 0.45 1
BS000022|BS000022.1 Pan troglodytes chromosome 22 clone:PTB-... 46 0.45 1
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma... 34 1.5 10
AL109865|AL109865.36 Human DNA sequence from clone GS1-120K1... 38 3.8 6
Homology SSJ189 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
CR382129_654(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 77 2e-13
CR382129_199(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 76 7e-13
CR382125_231(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 74 2e-12
AM920431_638(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 74 3e-12
(Q10138) RecName: Full=CRAL-TRIO domain-containing protein C3H8.... 73 4e-12
CR382133_199(CR382133|pid:none) Debaryomyces hansenii strain CBS... 70 3e-11
AM270115_50(AM270115|pid:none) Aspergillus niger contig An06c009... 69 8e-11
AE016818_396(AE016818|pid:none) Ashbya gossypii ATCC 10895 chrom... 69 1e-10
AM269993_6(AM269993|pid:none) Aspergillus niger contig An01c0470... 67 4e-10
CU928174_505(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 65 1e-09
Homology SSJ189 vs Genome
<more Genome info>
<List of Series> <Series: SSJ1-D> <Clone: SSJ189> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
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