Dictyostelium discoideum cDNA Clone SSJ158

Size:		0.5k
3' sequence:	MY980106
5' sequence:	*
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSJ158

---------- TCCCGGTGGT CCATACTGGA TTGACCATGT GTGGACTTTT
TAAGTTTGAC GCCGTTCCGT TAGCTCAATC AATTTCTCCG TCCCTTCGTT
CTGGTGCCAC TGAACTCTCA AAGGTTGATC GTGAAAAACT TTACCCTTCC
TTAGGTCTTT TTTACCCTGA AGGTACTAGC CAAACTGGTA AAGCTGAAGA
CGTTGATCAA GTTAGAGGTT TCCTCGAAGT TTACTCTACC TATCGTATTT
TCTTCTCTGA TGGTGTCAAC AACGAGAAAT CATTGGAAGA CTCATTCTTT
GAACATGAAG TTCACTTAAA TCGTATGGCT TTTGAAGATC AATATGGTTA
TGGTGTCTTT TACGCTTACA TTAAATTAGG AGAACAGGAA ATTAGAAATA
TAGTTTGGAT TGCTGAATGT ATTAGTCAAA ATATGAAACA AAAATTGAAT
CAATACATTC CAATCTTTTA TTTTAATGAC TTTATCTAAT TATTAAAAAA
AATAAAAAAA AAAATAAAAA AAAATTAAAA TAAAATAAAA CAATAATAAA
AAAAAAAAAA ATAAAAAAAA ATCAAAGTAA TCAAATAAAT AAAAATAAAA
ATAAAAATAA TTTAAT

Translated Amino Acid Sequence SSJ158

---PVVHTGLTMCGLFKFDAVPLAQSISPSLRSGATELSKVDREKLYPSLGLFYPEGTSQ
TGKAEDVDQVRGFLEVYSTYRIFFSDGVNNEKSLEDSFFEHEVHLNRMAFEDQYGYGVFY
AYIKLGEQEIRNIVWIAECISQNMKQKLNQYIPIFYFNDFI*llkkikkkikkn*nkikq
**kkkk*kkikvik*ikikikii*

Homology SSJ158 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSJ158 (SSJ158Q) /CSM/SS/SSJ1-C/SSJ158Q.Seq.d/                        959   0.0
VSE491 (VSE491Q) /CSM/VS/VSE4-D/VSE491Q.Seq.d/                        628   e-179
VSA730 (VSA730Q) /CSM/VS/VSA7-B/VSA730Q.Seq.d/                        628   e-179
VSA185 (VSA185Q) /CSM/VS/VSA1-D/VSA185Q.Seq.d/                        628   e-179
SSM519 (SSM519Q) /CSM/SS/SSM5-A/SSM519Q.Seq.d/                        628   e-179
SSK753 (SSK753Q) /CSM/SS/SSK7-C/SSK753Q.Seq.d/                        628   e-179
SSK721 (SSK721Q) /CSM/SS/SSK7-A/SSK721Q.Seq.d/                        628   e-179
SSK423 (SSK423Q) /CSM/SS/SSK4-A/SSK423Q.Seq.d/                        628   e-179
SSI366 (SSI366Q) /CSM/SS/SSI3-C/SSI366Q.Seq.d/                        628   e-179
SSI279 (SSI279Q) /CSM/SS/SSI2-D/SSI279Q.Seq.d/                        628   e-179

Homology SSJ158 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma...   628   e-176  1
U13150|U13150.1 Dictyostelium discoideum vacuolar ATPase sub...   615   e-172  1
BE029219|BE029219.1 kp26d05.y1 TBN95TM-SSFH Strongyloides st...    60   6e-09  2
AL845308|AL845308.11 Mouse DNA sequence from clone RP23-31I2...    36   0.003  4
CB529551|CB529551.1 UI-H-FT2-bjh-m-06-0-UI.s1 NCI_CGAP_FT2 H...    52   0.009  1
CA306616|CA306616.1 UI-H-FT1-bht-m-05-0-UI.s1 NCI_CGAP_FT1 H...    52   0.009  1
AX711887|AX711887.1 Sequence 1 from Patent WO02079472.             52   0.009  1
AI733048|AI733048.1 oj41b11.x5 NCI_CGAP_Kid3 Homo sapiens cD...    52   0.009  1
CQ727764|CQ727764.1 Sequence 13698 from Patent WO02068579.         52   0.009  1
AC084128|AC084128.6 Homo sapiens chromosome 8, clone CTD-311...    52   0.009  1

Homology SSJ158 vs Protein

Sequences producing significant alignments:                      (bits) Value


A55016(A55016) lysosomal membrane protein DVA41 - slime mold (Di...   239   9e-62
(P54641) RecName: Full=V-type proton ATPase subunit d;          ...   239   9e-62
BC042233_1(BC042233|pid:none) Xenopus laevis ATPase, H+ transpor...   150   6e-35
AY648766_1(AY648766|pid:none) Danio rerio v-ATPase AC39 subunit ...   149   1e-34
BC125665_1(BC125665|pid:none) Xenopus tropicalis ATPase, H+ tran...   148   2e-34
(Q5ZHL0) RecName: Full=V-type proton ATPase subunit d 2;        ...   147   3e-34
(P51863) RecName: Full=V-type proton ATPase subunit d 1;        ...   147   5e-34
(P61420) RecName: Full=V-type proton ATPase subunit d 1;        ...   147   5e-34
A32123(A32123)H+-exporting ATPase (EC 3.6.3.6) polypeptide IV, v...   147   5e-34
AK300570_1(AK300570|pid:none) Homo sapiens cDNA FLJ54755 complet...   147   5e-34

Homology SSJ158 vs Genome