Homology SSJ101 vs Protein
Query= SSJ101 (SSJ101Q) /CSM/SS/SSJ1-A/SSJ101Q.Seq.d/
(873 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(P15269) RecName: Full=Spore coat protein SP70; AltName: Full=Pr... 268 4e-70
S07638(S07638;A60942;B60942) spore coat protein SP96 precursor -... 60 2e-07
(P14328) RecName: Full=Spore coat protein SP96; &AC117075_49(AC... 60 2e-07
(Q54QX2) RecName: Full=Probable spore coat protein DDB_G0283555;... 50 2e-04
(Q04503) RecName: Full=Prespore protein Dp87; Flags: Precursor; 49 3e-04
D13973_1(D13973|pid:none) Dictyostelium discoideum gene for Dp87... 49 3e-04
AC117267_7(AC117267|pid:none) Dictyostelium discoideum chromosom... 47 0.002
S72639_1(S72639|pid:none) PspB=prespore-specific gene {5' region... 41 0.094
(P54704) RecName: Full=Spore coat protein SP85; AltName: Full=Ce... 41 0.094
T22274(T22274)hypothetical protein F46B3.9 - Caenorhabditis eleg... 40 0.16
AF245486_1(AF245486|pid:none) Polysphondylium pallidum spore coa... 39 0.36
AY142138_1(AY142138|pid:none) Giardia intestinalis isolate WB cl... 39 0.47
AY142126_1(AY142126|pid:none) Giardia intestinalis isolate WB cl... 37 1.0
AY142141_1(AY142141|pid:none) Giardia intestinalis isolate WB cl... 37 1.4
AY142140_1(AY142140|pid:none) Giardia intestinalis isolate WB cl... 37 1.4
(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor; 37 1.8
(P15270) RecName: Full=Spore coat protein SP60; Flags: Precursor... 37 1.8
(Q54C31) RecName: Full=Protein psiR; Flags: Precursor; 37 1.8
S28358(S28358;S20090) prespore vesicle protein - slime mold (Dic... 36 2.3
(P08798) RecName: Full=Prespore vesicle protein; Short=... 36 2.3
(Q1AGV7) RecName: Full=Syndecan 4-A; AltName: Full=Syndecan-4.1;... 36 2.3
BC131894_1(BC131894|pid:none) Xenopus laevis syndecan-4.1, mRNA ... 36 2.3
Z98877_13(Z98877|pid:none) Caenorhabditis elegans YAC Y69H2, com... 36 3.0
Z98877_12(Z98877|pid:none) Caenorhabditis elegans YAC Y69H2, com... 36 3.0
(Q04721) RecName: Full=Neurogenic locus notch homolog protein 2;... 35 5.2
AY574051_1(AY574051|pid:none) Ictalurus furcatus follistatin mRN... 35 5.2
AF308601_1(AF308601|pid:none) Homo sapiens NOTCH 2 (N2) mRNA, co... 35 5.2
AX357059_1(AX357059|pid:none) Sequence 21 from Patent EP1175909.... 35 5.2
DQ976710_7(DQ976710|pid:none) Hylobates klossii NOTCH2 (NOTCH2) ... 35 6.7
A96599(A96599) protein F20N2.10 [imported] - Arabidopsis thalian... 35 6.7
(A5YT95) RecName: Full=Follistatin; Short=FS; AltName: ... 35 6.7
AP008215_740(AP008215|pid:none) Oryza sativa (japonica cultivar-... 34 8.8
AB475006_1(AB475006|pid:none) Oryza sativa Japonica Group DN1 ge... 34 8.8
FR823382_176(FR823382|pid:none) Neospora caninum Liverpool compl... 34 8.8
CP002025_1060(CP002025|pid:none) Brachyspira pilosicoli 95/1000,... 34 8.8
AC024830_9(AC024830|pid:none) Caenorhabditis elegans cosmid Y55F... 34 8.8
FJ501956_1(FJ501956|pid:none) Oryza sativa Indica Group keratin ... 34 8.8
(Q90844) RecName: Full=Follistatin; Short=FS; AltName: ... 34 8.8
AM743169_1787(AM743169|pid:none) Stenotrophomonas maltophilia K2... 34 8.9
>(P15269) RecName: Full=Spore coat protein SP70; AltName:
Full=Protein Beejin; Flags: Precursor;
Length = 537
Score = 268 bits (684), Expect = 4e-70
Identities = 137/215 (63%), Positives = 141/215 (65%), Gaps = 2/215 (0%)
Frame = +2
Query: 56 QIYCPKGPPFVYLTQKVAGLVPIGTSL--AIPPRHCGGRPNKIKVICVPSPKGTCKTVQC 229
QI CPKG + +Q G + + P HCGGRPNKIKVICVPSPKGTCKTVQC
Sbjct: 307 QINCPKGHHCI--SQPKGGWIGSHKKRHWQLHPEHCGGRPNKIKVICVPSPKGTCKTVQC 364
Query: 230 PKGYKCKLYADGPTCVKIEKPKCLTCKDMHCESNGLLCVLTPQKKTDEEXXXXXXXXXXX 409
PKGYKCKLYADGPTCVKIEKPKCLTCKDMHCESNGLLCVLTPQKKTDEE
Sbjct: 365 PKGYKCKLYADGPTCVKIEKPKCLTCKDMHCESNGLLCVLTPQKKTDEECCPIIPICINP 424
Query: 410 XXXXXXXXXXXXXXXXXXXXXXXXXLVXXXXXXXXXXXXXXXXXDEESSDPNAILGLFED 589
LV DEESSDPNAILGLFED
Sbjct: 425 STIAASTIATTTASTRHSTASTIASLVTGTTSGGGGMGSFGGRSDEESSDPNAILGLFED 484
Query: 590 DIFWGDNDEYFSDNYRYVDEEDIDEDFNGNDEFEI 694
DIFWGDNDEYFSDNYRYVDEEDIDEDFNGNDEFEI
Sbjct: 485 DIFWGDNDEYFSDNYRYVDEEDIDEDFNGNDEFEI 519
Score = 34.7 bits (78), Expect = 6.7
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +2
Query: 152 HCGGRPNKIKVICVPSPKGTCKTVQCPKGYKCKLYADGPTCVKIEKPKCLTCKDMHCESN 331
HC R ++ +CV +C V C GY CK C++ +K +C C ++C
Sbjct: 261 HCEVRGSQ--AVCVADEFDSCANVDCGSGYHCK----NGECIR-DKVECDACDQINC-PK 312
Query: 332 GLLCVLTPQ 358
G C+ P+
Sbjct: 313 GHHCISQPK 321
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 2,059,563,638
Number of extensions: 43701111
Number of successful extensions: 112228
Number of sequences better than 10.0: 39
Number of HSP's gapped: 111355
Number of HSP's successfully gapped: 49
Length of query: 291
Length of database: 1,732,582,204
Length adjustment: 131
Effective length of query: 160
Effective length of database: 1,031,835,301
Effective search space: 165093648160
Effective search space used: 165093648160
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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