<List of Series> <Series: SSJ1-A> <Clone: SSJ101> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Clone SSJ101
Dictyostelium discoideum cDNA Project Home
Size: 1.9k
3' sequence: MY980106
5' sequence: *
Whole insert?: *
Accession #:
Remarks: *
Sequence SSJ101
---------- GAATGGTATC CGGGGATAAA AGTAGGAATC CGATGCATGT
GGATCCAAAT TTACTGCCCA AAGGGTCCTC CATTTGTATA TCTCACCCAA
AAGGTGGCTG GATTGGTCCC CATAGGAACG TCACTGGCAA TTCCACCCAG
ACATTGTGGC GGACGTCCAA ATAAGATTAA AGTCATCTGT GTTCCATCAC
CAAAAGGTAC TTGCAAGACT GTTCAATGTC CAAAAGGTTA CAAATGCAAA
CTCTATGCTG ATGGTCCAAC ATGTGTAAAG ATTGAAAAAC CAAAATGTCT
CACTTGTAAA GATATGCATT GTGAGTCAAA TGGATTACTC TGTGTCTTGA
CTCCACAAAA GAAGACTGAT GAAGAATGTT GTCCAATTAT TCCAATCTGT
ATCAATCCAT CAACTATTGC CGCATCCACT ATTGCCACTA CAACTGCATC
AACTCGTCAC TCAACTGCCT CAACAATTGC CTCATTAGTC ACTGGTACCA
CAAGTGGTGG TGGTGGTATG GGTTCATTTG GTGGTCGATC CGATGAAGAA
TCAAGTGATC CAAATGCTAT ACTTGGTCTC TTTGAAGACG ATATTTTCTG
GGGTGATAAT GATGAATACT TTAGTGATAA CTACCGTTAT GTTGATGAAG
AAGATATTGA TGAAGATTTC AATGGTAATG ATGAATTTGA AATTGATGTT
GAAGGTGATT TCCAAGAAGA TGATTTCGAA GAAGAATATG CATTTTATTA
AATTAAACTT TTTTTCATAA AAAAATAATA ATAATAATTT AATAACTAAT
CATTATCATC AATAATAACA TTATAATATT ACTTTAATAA CAATACTTTT
TTTTAATATT CAAAGACTTT ACA
Translated Amino Acid Sequence SSJ101
<All Frames>
---WYPGIKVGIRCMWIQIYCPKGPPFVYLTQKVAGLVPIGTSLAIPPRHCGGRPNKIKV
ICVPSPKGTCKTVQCPKGYKCKLYADGPTCVKIEKPKCLTCKDMHCESNGLLCVLTPQKK
TDEECCPIIPICINPSTIAASTIATTTASTRHSTASTIASLVTGTTSGGGGMGSFGGRSD
EESSDPNAILGLFEDDIFWGDNDEYFSDNYRYVDEEDIDEDFNGNDEFEIDVEGDFQEDD
FEEEYAFY*iklffikk****fnn*slssiitl*yyfnnntff*ysktl
Homology SSJ101 vs CSM-cDNA
<more CSM info>
Sequences producing significant alignments: (bits) Value
SSJ101 (SSJ101Q) /CSM/SS/SSJ1-A/SSJ101Q.Seq.d/ 1445 0.0
SFD365 (SFD365Q) /CSM/SF/SFD3-C/SFD365Q.Seq.d/ 1229 0.0
SSM572 (SSM572Q) /CSM/SS/SSM5-C/SSM572Q.Seq.d/ 1193 0.0
SSC714 (SSC714Q) /CSM/SS/SSC7-A/SSC714Q.Seq.d/ 1193 0.0
SFH118 (SFH118Q) /CSM/SF/SFH1-A/SFH118Q.Seq.d/ 1193 0.0
SFF412 (SFF412Q) /CSM/SF/SFF4-A/SFF412Q.Seq.d/ 1193 0.0
CFH254 (CFH254Q) /CSM/CF/CFH2-C/CFH254Q.Seq.d/ 1193 0.0
AFK892 (AFK892Q) /CSM/AF/AFK8-D/AFK892Q.Seq.d/ 1193 0.0
AFJ545 (AFJ545Q) /CSM/AF/AFJ5-B/AFJ545Q.Seq.d/ 1193 0.0
AFG860 (AFG860Q) /CSM/AF/AFG8-C/AFG860Q.Seq.d/ 1193 0.0
Homology SSJ101 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
M26238|M26238.1 D.discoideum spore coat protein SP70 gene, c... 1168 0.0 4
AC115584|AC115584.2 Dictyostelium discoideum chromosome 2 ma... 1168 0.0 7
AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 ma... 38 0.007 11
AC005140|AC005140.8 Plasmodium falciparum chromosome 12 clon... 50 0.054 1
AE014851|AE014851.1 Plasmodium falciparum 3D7 chromosome 12,... 50 0.054 1
CA855068|CA855068.1 PfESToac46b06.y1 Plasmodium falciparum 3... 50 0.054 1
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 ma... 40 0.14 9
AC099694|AC099694.12 Mus musculus, clone RP23-195D9, complet... 48 0.21 1
BE217634|BE217634.1 MD0264 Meloidogyne incognita J2 (#MD99-1... 48 0.21 1
CD951782|CD951782.1 SAY_66 GeneTag2 Zea mays cDNA, mRNA sequ... 48 0.21 1
Homology SSJ101 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
(P15269) RecName: Full=Spore coat protein SP70; AltName: Full=Pr... 268 3e-70
S07638(S07638;A60942;B60942) spore coat protein SP96 precursor -... 60 2e-07
(P14328) RecName: Full=Spore coat protein SP96; &AC117075_49(AC... 60 2e-07
(Q54QX2) RecName: Full=Probable spore coat protein DDB_G0283555;... 50 1e-04
(Q04503) RecName: Full=Prespore protein Dp87; Flags: Precursor; 49 3e-04
D13973_1(D13973|pid:none) Dictyostelium discoideum gene for Dp87... 49 3e-04
AC117267_7(AC117267|pid:none) Dictyostelium discoideum chromosom... 47 0.002
S72639_1(S72639|pid:none) PspB=prespore-specific gene {5' region... 41 0.087
(P54704) RecName: Full=Spore coat protein SP85; AltName: Full=Ce... 41 0.087
T22274(T22274)hypothetical protein F46B3.9 - Caenorhabditis eleg... 40 0.15
Homology SSJ101 vs Genome
<more Genome info>
<List of Series> <Series: SSJ1-A> <Clone: SSJ101> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Project Home