Dictyostelium discoideum cDNA Clone SSI841

Size:		0.7k
3' sequence:	TM980117
5' sequence:	*
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSI841

---------- TTAGAAATGT ACTTAAAACT ACAACAAATG TTGGTTTAAA
AAATACAAGT GGTTTAGTTT TTAGACAAAC AAATGTTAAT TTTTTAAAAT
CCTCAACAAC CACAACAGCA ATTAAAAGTG GAATTTTTGG AGAACTAATT
ACAAAAAGAA ATTATCATGA AAGAGTATTG GATCATTATA ATAACCCAAG
AAATATTGGG TCATTCGATA AGAAAGATAT CGATGTTGGT ACTGCAACCG
TTGGTGCACC AGCATGTGGT GACGTTATGA AAATTCAAAT CAAGGTAAAG
GAAAACATTG TTGTCGATGT TTGTTTCAAA ACTTTTGGTT GTGGTTCTGC
AATCGCTTCA AGTTCATTGG CAACTGAATG GGTAAAAGGT AAAACATTAG
ATCAATGTCT CGAAATTAAA AATACCGATA TCGCAAAACA TCTCTCACTT
CCACCAGTAA AAATGCATTG TAGTATGCTT GCCGAACAAG CTATCAAAAG
AGCTATCTAT GATTACAAAG TTAAACATGA AAAATTAAAT TCATCTGAAC
AAACTACAAT TGAAACTACT GCATCTTTGT AAATAATTTT AATAATTTAA
AAAAATAAAT AAAAAAATAA AAAAATAAAA AAAAAAAA

Translated Amino Acid Sequence SSI841

---RNVLKTTTNVGLKNTSGLVFRQTNVNFLKSSTTTTAIKSGIFGELITKRNYHERVLD
HYNNPRNIGSFDKKDIDVGTATVGAPACGDVMKIQIKVKENIVVDVCFKTFGCGSAIASS
SLATEWVKGKTLDQCLEIKNTDIAKHLSLPPVKMHCSMLAEQAIKRAIYDYKVKHEKLNS
SEQTTIETTASL*iilii*knk*knkkikkk

Homology SSI841 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSD315 (VSD315Q) /CSM/VS/VSD3-A/VSD315Q.Seq.d/                       1166   0.0
SSK562 (SSK562Q) /CSM/SS/SSK5-C/SSK562Q.Seq.d/                       1166   0.0
SSI841 (SSI841Q) /CSM/SS/SSI8-B/SSI841Q.Seq.d/                       1166   0.0
SSJ623 (SSJ623Q) /CSM/SS/SSJ6-A/SSJ623Q.Seq.d/                       1003   0.0
SSH360 (SSH360Q) /CSM/SS/SSH3-C/SSH360Q.Seq.d/                        565   e-160
SSC569 (SSC569Q) /CSM/SS/SSC5-C/SSC569Q.Seq.d/                         42   0.010
CFJ759 (CFJ759Q) /CSM/CF/CFJ7-C/CFJ759Q.Seq.d/                         38   0.16
VSJ817 (VSJ817Q) /CSM/VS/VSJ8-A/VSJ817Q.Seq.d/                         36   0.63
VSF836 (VSF836Q) /CSM/VS/VSF8-B/VSF836Q.Seq.d/                         36   0.63
SLJ883 (SLJ883Q) /CSM/SL/SLJ8-D/SLJ883Q.Seq.d/                         36   0.63

Homology SSI841 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU263826) Dictyostelium discoideum vegetative cDNA clone:VS...  1166   0.0    1
(C94224) Dictyostelium discoideum slug cDNA, clone SSK562.       1166   0.0    1
(C90609) Dictyostelium discoideum slug cDNA, clone SSI841.       1166   0.0    1
(AU263825) Dictyostelium discoideum vegetative cDNA clone:VS...   936   0.0    1
(AU073496) Dictyostelium discoideum slug cDNA, clone SSH360.      285   e-123  2
(AU074391) Dictyostelium discoideum slug cDNA, clone SSK562.      363   6e-96  1
(GR572263) CBTG610.g1 CBTG Dictyostelium purpureum 12 hr veg...   297   3e-93  2
(GR572129) CBTG514.g1 CBTG Dictyostelium purpureum 12 hr veg...   297   3e-93  2
(GR572262) CBTG610.b1 CBTG Dictyostelium purpureum 12 hr veg...   291   2e-91  2
(GR572128) CBTG514.b1 CBTG Dictyostelium purpureum 12 hr veg...   262   1e-82  2

Homology SSI841 vs Protein

Sequences producing significant alignments:                      (bits) Value


GN111776_1(GN111776|pid:none) Sequence 16557 from Patent WO20090...   202   1e-50
EU952383_1(EU952383|pid:none) Zea mays clone 1279145 nifU-like N...   202   1e-50
BT040469_1(BT040469|pid:none) Zea mays full-length cDNA clone ZM...   202   1e-50
GN111528_1(GN111528|pid:none) Sequence 16309 from Patent WO20090...   200   4e-50
GN111710_1(GN111710|pid:none) Sequence 16491 from Patent WO20090...   199   9e-50
GN111536_1(GN111536|pid:none) Sequence 16317 from Patent WO20090...   199   9e-50
FR824131_3(FR824131|pid:none) Albugo laibachii Nc14, genomic con...   198   1e-49
BT091656_1(BT091656|pid:none) Soybean clone JCVI-FLGm-8B21 unkno...   198   1e-49
EF676161_1(EF676161|pid:none) Picea sitchensis clone WS02715_O21...   198   2e-49
GN111526_1(GN111526|pid:none) Sequence 16307 from Patent WO20090...   197   3e-49

Homology SSI841 vs Genome