Dictyostelium discoideum cDNA Clone SSG324

Size:		0.8k
3' sequence:	*
5' sequence:	TM981020
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSG324

TAAATTACAC CCTGCCCAAA AATATATATA TTTCATATAT ATATTTATTT
ATTTTTTTAT TTTTATTTCA GTATATATAT TTTTTTTAAA AAAAAATGGA
AACATTATTA GCATTTAAAG TTAAAGGTGG TGTATTATGT TTAGCAGATT
CATCAGTTAA TCATTCAATT GTAAAGATGA AAGATGATGA AGATAAAATT
TTAGAAATTG ATGGACACAA ATTATTATTA TCAGCAGGTG AAGCAGGTGA
TCGTGTTCAA TTCACTGAAT ATATATCAAA GAATATCAAA TTATACTCCC
TTCGTAATAG TTATCCAATG TCAACACCAG CAGCAGCAAA TTTTATTCGT
AATGAATTAG CAACATCCAT CAGAAGTCAT CCATACTCAA TCAATTTAAT
TTTGGCTGGT TATGACAAAG AAGTTGAAGA TGGTGGTACA TCCCTCTATT
ACATGGATTA TTTAGGATCA TTACAAAAGT TAAATTTCGG TTGTCACGGT
TATGCAAGTT ACTTTTTATT GGGTTTATTA GATCGTCATC ATAAATGTGA
TCTTTCCCTT GAAGATGGTA TCAATTTAAT GCATTTATGT ACTACTGAAT
TAAAAACTCG TTTCTTAGTC TCTGGAAAAT ATACC----- -----

Translated Amino Acid Sequence SSG324

nytlpkniyisyiylfiflflfqyiyff*KKMETLLAFKVKGGVLCLADSSVNHSIVKMK
DDEDKILEIDGHKLLLSAGEAGDRVQFTEYISKNIKLYSLRNSYPMSTPAAANFIRNELA
TSIRSHPYSINLILAGYDKEVEDGGTSLYYMDYLGSLQKLNFGCHGYASYFLLGLLDRHH
KCDLSLEDGINLMHLCTTELKTRFLVSGKY---

Homology SSG324 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSG324 (SSG324Q) /CSM/SS/SSG3-A/SSG324Q.Seq.d/                       1068   0.0
SSL873 (SSL873Q) /CSM/SS/SSL8-D/SSL873Q.Seq.d/                        668   0.0
SSI116 (SSI116Q) /CSM/SS/SSI1-A/SSI116Q.Seq.d/                        432   e-120
SSG614 (SSG614Q) /CSM/SS/SSG6-A/SSG614Q.Seq.d/                         38   0.16
SFJ773 (SFJ773Q) /CSM/SF/SFJ7-D/SFJ773Q.Seq.d/                         38   0.16
SFF147 (SFF147Q) /CSM/SF/SFF1-B/SFF147Q.Seq.d/                         38   0.16
CFB188 (CFB188Q) /CSM/CF/CFB1-D/CFB188Q.Seq.d/                         38   0.16
AFA237 (AFA237Q) /CSM/AF/AFA2-B/AFA237Q.Seq.d/                         38   0.16
VSI267 (VSI267Q) /CSM/VS/VSI2-C/VSI267Q.Seq.d/                         36   0.64
VSG392 (VSG392Q) /CSM/VS/VSG3-D/VSG392Q.Seq.d/                         36   0.64

Homology SSG324 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


BJ052890|BJ052890.1 Xenopus laevis cDNA clone:XL043a12, 3' e...    40   4e-04  2
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma...    36   0.001  17
AC021638|AC021638.5 Drosophila melanogaster chromosome 2 clo...    36   0.025  2
AL935291|AL935291.6 Zebrafish DNA sequence from clone CH211-...    38   0.033  9
AC146842|AC146842.5 Medicago truncatula clone mth2-10a3, com...    36   0.074  4
BX294122|BX294122.5 Zebrafish DNA sequence *** SEQUENCING IN...    36   0.18   5
AL844509|AL844509.1 Plasmodium falciparum chromosome 13.           38   0.33   18
AL929352|AL929352.1 Plasmodium falciparum strain 3D7, chromo...    36   0.37   9
AF250284|AF250284.1 Amsacta moorei entomopoxvirus, complete ...    32   0.40   10
BX908724|BX908724.1 Zebrafish DNA sequence *** SEQUENCING IN...    34   0.41   6

Homology SSG324 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q55DY7) RecName: Full=Proteasome subunit beta type-2;          ...   364   2e-99
(O24633) RecName: Full=Proteasome subunit beta type-2-B;        ...   186   6e-46
BT089367_1(BT089367|pid:none) Soybean clone JCVI-FLGm-1F2 unknow...   185   2e-45
(O23714) RecName: Full=Proteasome subunit beta type-2-A;        ...   184   4e-45
BT051370_1(BT051370|pid:none) Medicago truncatula clone MTYF1_F2...   182   1e-44
EF148334_1(EF148334|pid:none) Populus trichocarpa x Populus delt...   182   1e-44
JO843436_1(JO843436|pid:none) TSA: Amblyomma maculatum Am-71540 ...   181   2e-44
CP002687_1689(CP002687|pid:none) Arabidopsis thaliana chromosome...   176   8e-43
EU959817_1(EU959817|pid:none) Zea mays clone 220102 proteasome s...   173   7e-42
AY736118_1(AY736118|pid:none) Triticum aestivum 20S proteasome b...   172   9e-42

Homology SSG324 vs Genome