<List of Series> <Series: SSE8-B> <Clone: SSE832> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Clone SSE832

Dictyostelium discoideum cDNA Project Home
Size:		858
3' sequence:	HM971014
5' sequence:	TM980930
Whole insert?:	Y
Accession #:	
Remarks:	*

Sequence SSE832

GACAATTTAG CGAAAATCAA CAAATACATT TCAAAATAAT AAAAATAAAA
AAAATGAGTG GATACGTTGG AAACCTTTCA CCAGAACAAG AACATCAATT
AGGTATTATT AAATCTAAAA TTGCAGAAAT TAATGATCCA GTTGTAGAAA
AAGAAATTCA ACAATTAGAT GATTCTATGA CCTTAAGATT TTTAAGAGCT
AGAAAATGGA ATCTAAAAGA TTCATTTGAT ATGCTCTATG AAGCATTAAA
ATTCCGAGCA ACATTTCAAG ATGTTGGAGT TGAAGGTATA ACAGAATCAA
TGGTTGTTAA TGAATTAAAG AGTGGTAAGA GTTATTTCCA TGGTGTTGAT
AAAGGTGGTA GACCAGTTTG TATTGTTAAA ACCAGTAGAC ATGATAGTTA
CAACAGAGAT TTGAATGAAT CGATGAGATA TTGTGTCTAC GTAATGGAAA
ATGGTAAATC AATGTTAAAG GACGGTATTG NCACTTATTT TCGATATGTC
TGATTTTAGT TCAAAAAATA TGGNTTATCC NTTGGTTAAA TTTATGGTTG
AATTATTTCA AAAGTTTTAT CCAGAATCAT TACAAAAATG TTTTTAATTT
TAAATGCCCC TTGGATCTTT ATGGGAATTT GGCATATCAT CAAACATTGG
TTAGATCCAA ATACCGCTTC AAAAGTTTCT TTTGTCAAAA CTAAACAATT
GGTTGATTAT ATTCCAAAAG ATCAATTAGA AAGTTCTTAT GGTGGAACAA
GTACATTTAA ATATACTTAT GAGGGAAAAG AAGTAAAGTA AAAAAAAAAA
AAAAAAAAAA AAAAAAAAAA ANNAANAAAA AAAAAAAAAA AAAAAA

Translated Amino Acid Sequence SSE832

<All Frames> 
QFSENQQIHFKIIKIKKMSGYVGNLSPEQEHQLGIIKSKIAEINDPVVEKEIQQLDDSMT
LRFLRARKWNLKDSFDMLYEALKFRATFQDVGVEGITESMVVNELKSGKSYFHGVDKGGR
PVCIVKTSRHDSYNRDLNESMRYCVYVMENGKSMLKDGIXTYFRYV*f*fkkyglsxg*i
yg*iiskvlsriitkmflilnapwifmgiwhiikhwldpntaskvsfvktkqlvdyipkd
qlessyggtstfkytyegkevk*kkkkkkkkkkxxkkkkkk


Homology SSE832 vs CSM-cDNA

<more CSM info> 
Sequences producing significant alignments:                      (bits) Value


SSE832 (SSE832Q) /CSM/SS/SSE8-B/SSE832Q.Seq.d/                       1439   0.0
VSD357 (VSD357Q) /CSM/VS/VSD3-C/VSD357Q.Seq.d/                       1306   0.0
SSB584 (SSB584Q) /CSM/SS/SSB5-D/SSB584Q.Seq.d/                        842   0.0
FC-IC0515 (FC-IC0515Q) /CSM/FC-IC/FC-IC0515Q.Seq.d/                   496   e-139
FC-IC0335 (FC-IC0335Q) /CSM/FC-IC/FC-IC0335Q.Seq.d/                   496   e-139
SSJ189 (SSJ189Q) /CSM/SS/SSJ1-D/SSJ189Q.Seq.d/                        387   e-106
VSH630 (VSH630Q) /CSM/VS/VSH6-B/VSH630Q.Seq.d/                         40   0.054
VHH823 (VHH823Q) /CSM/VH/VHH8-A/VHH823Q.Seq.d/                         40   0.054
VFI881 (VFI881Q) /CSM/VF/VFI8-D/VFI881Q.Seq.d/                         40   0.054
CFF674 (CFF674Q) /CSM/CF/CFF6-D/CFF674Q.Seq.d/                         40   0.054


Homology SSE832 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(HH771413) Sequence 7600 from Patent EP2221382.                   844   0.0    3
(AU263899) Dictyostelium discoideum vegetative cDNA clone:VS...   809   0.0    4
(AU263898) Dictyostelium discoideum vegetative cDNA clone:VS...   844   0.0    3
(AU037187) Dictyostelium discoideum slug cDNA, clone SSB584.      375   0.0    3
(C84903) Dictyostelium discoideum slug cDNA, clone SSE832.        391   e-157  2
(AU271663) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   309   e-136  2
(AU271525) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   309   e-136  2
(AU271524) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   309   e-136  2
(AU072546) Dictyostelium discoideum slug cDNA, clone SSE832.      369   e-110  2
(C90823) Dictyostelium discoideum slug cDNA, clone SSJ189.        327   e-104  2


Homology SSE832 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


AM270115_50(AM270115|pid:none) Aspergillus niger contig An06c009...   112   2e-23
CR382129_654(CR382129|pid:none) Yarrowia lipolytica strain CLIB1...   104   5e-21
(Q10138) RecName: Full=CRAL-TRIO domain-containing protein C3H8....   102   2e-20
AM920431_638(AM920431|pid:none) Penicillium chrysogenum Wisconsi...    99   3e-19
AE016818_396(AE016818|pid:none) Ashbya gossypii ATCC 10895 chrom...    96   2e-18
CR382129_199(CR382129|pid:none) Yarrowia lipolytica strain CLIB1...    96   3e-18
CR382125_231(CR382125|pid:none) Kluyveromyces lactis strain NRRL...    93   1e-17
AM456511_6(AM456511|pid:none) Vitis vinifera contig VV78X130314....    92   4e-17
AM269993_6(AM269993|pid:none) Aspergillus niger contig An01c0470...    88   5e-16
CU928168_586(CU928168|pid:none) Kluyveromyces thermotolerans str...    88   5e-16


Homology SSE832 vs Genome

<more Genome info> 





<List of Series> <Series: SSE8-B> <Clone: SSE832> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>





Dictyostelium discoideum cDNA Project Home