Homology SSE832 vs DNA
Query= SSE832 (SSE832Q) /CSM/SS/SSE8-B/SSE832Q.Seq.d/
(846 letters)
Database: ddbj_B
138,030,308 sequences; 128,745,918,079 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(HH771413) Sequence 7600 from Patent EP2221382. 844 0.0 3
(AU263899) Dictyostelium discoideum vegetative cDNA clone:VS... 809 0.0 4
(AU263898) Dictyostelium discoideum vegetative cDNA clone:VS... 844 0.0 3
(AU037187) Dictyostelium discoideum slug cDNA, clone SSB584. 375 0.0 3
(C84903) Dictyostelium discoideum slug cDNA, clone SSE832. 391 e-157 2
(AU271663) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 309 e-136 2
(AU271525) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 309 e-136 2
(AU271524) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 309 e-136 2
(AU072546) Dictyostelium discoideum slug cDNA, clone SSE832. 369 e-110 2
(C90823) Dictyostelium discoideum slug cDNA, clone SSJ189. 327 e-104 2
(EJ453955) 1093015491156 Global-Ocean-Sampling_GS-28-01-01-1... 48 7e-04 2
(AC225468) Medicago truncatula clone mth2-175c18, WORKING DR... 50 0.001 5
(AM285302) Spiroplasma citri GII3-3X chromosome, contig Cont... 44 0.014 6
(EJ499612) 1095403608504 Global-Ocean-Sampling_GS-28-01-01-1... 42 0.036 2
(ER350101) 1092346001687 Global-Ocean-Sampling_GS-34-01-01-1... 40 0.14 2
(EJ806096) 1093017459962 Global-Ocean-Sampling_GS-30-02-01-1... 40 0.14 2
(EJ147938) 1092343732205 Global-Ocean-Sampling_GS-27-01-01-1... 40 0.14 2
(EJ409130) 1093012122601 Global-Ocean-Sampling_GS-28-01-01-1... 40 0.14 2
(EJ805764) 1093017458810 Global-Ocean-Sampling_GS-30-02-01-1... 40 0.14 2
(GT912621) CBWB5498.b1 CBWB Piromyces sp. E2 fungal mat and ... 44 0.14 2
(AC225532) Medicago truncatula clone mth2-105l11, WORKING DR... 50 0.18 1
(AC225463) Medicago truncatula clone mth2-170h21, WORKING DR... 50 0.18 1
(CP002108) Mycoplasma leachii PG50 clone MU clone A8, comple... 36 0.33 18
(AC167737) Bos taurus clone CH240-201G18, WORKING DRAFT SEQU... 38 0.40 2
(AC171229) Bos taurus clone CH240-279M5, WORKING DRAFT SEQUE... 38 0.40 2
(DR077240) Lr_Cd2CF_60D08_M13R Earthworm Cadmium Exposure Li... 42 0.48 2
(ER463176) 1092963907061 Global-Ocean-Sampling_GS-35-01-01-1... 38 0.51 2
(AC084443) Caenorhabditis briggsae cosmid CB011L08, complete... 48 0.70 1
(AC239588) Microtus ochrogaster clone CH232-437J7, WORKING D... 48 0.70 1
(AC238824) Microtus ochrogaster clone CH232-441H17, WORKING ... 48 0.70 1
(AC238419) Microtus ochrogaster clone CH232-302A11, WORKING ... 48 0.70 1
(AC224728) Bos taurus clone CH240-478C12, WORKING DRAFT SEQU... 38 1.5 5
(Z19152) Caenorhabditis elegans Cosmid B0464. 42 1.5 3
(EK323187) 1095462436515 Global-Ocean-Sampling_GS-31-01-01-1... 34 1.9 2
(EK160490) 1095458028873 Global-Ocean-Sampling_GS-31-01-01-1... 34 1.9 2
(AG685016) Macaca fuscata fuscata DNA, clone: MSB2-115E10_R,... 32 1.9 2
(BX927113) Zebrafish DNA sequence from clone DKEY-5N1 in lin... 46 2.8 1
(BX324138) Zebrafish DNA sequence from clone CH211-127F10 in... 46 2.8 1
(AP001099) Homo sapiens genomic DNA, chromosome 18 clone:RP1... 46 2.8 1
(AC100954) Mus musculus clone RP23-73P20, LOW-PASS SEQUENCE ... 46 2.8 1
(FP074900) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.8 1
(AP002009) Homo sapiens genomic DNA, chromosome 11q13 clone:... 46 2.8 1
(AP001911) Homo sapiens genomic DNA, chromosome 18p11.3 clon... 46 2.8 1
(AP001283) Homo sapiens genomic DNA, chromosome 18p11.2 clon... 46 2.8 1
(AC196692) Gallus gallus chromosome UNKNOWN clone CH261-172L... 46 2.8 1
(AC018746) Homo sapiens clone H_NH0404F04, WORKING DRAFT SEQ... 46 2.8 1
(AC015677) Homo sapiens chromosome 18 clone RP11-205G20 map ... 46 2.8 1
(CN409534) 17000583182053 GRN_PRENEU Homo sapiens cDNA 5', m... 46 2.8 1
(BU656121) cl06g02.z1 Hembase; Erythroid Precursor Cells (LC... 46 2.8 1
(BU656042) cl05g02.z1 Hembase; Erythroid Precursor Cells (LC... 46 2.8 1
(HS217516) CCTS13809.b1 CCTS Crassostrea gigas mixed adult t... 46 2.8 1
(GW042618) CCZB4599.b1 CCZB Tetranychus urticae London adult... 46 2.8 1
(AM285308) Spiroplasma citri GII3-3X chromosome, contig Cont... 44 4.4 2
(AC174160) Mus musculus chromosome 1, clone wi1-2075L23, com... 42 4.7 2
(FV536247) JP 2009538603-A/226: Modified Microbial Nucleic A... 36 5.1 9
(FV536246) JP 2009538603-A/225: Modified Microbial Nucleic A... 36 5.1 9
(ET060257) MUGQ_CH252P356I17Sp6_CP667_071 CHORI-252 Vervet M... 38 6.9 2
(HN913185) GC_Bb105M12.F GC_Bb Glycine cyrtoloba genomic 5',... 34 7.0 2
(ER330525) 1092344254294 Global-Ocean-Sampling_GS-34-01-01-1... 34 7.0 2
(EK330087) 1095467020850 Global-Ocean-Sampling_GS-31-01-01-1... 34 7.1 2
(EJ414192) 1093012169993 Global-Ocean-Sampling_GS-28-01-01-1... 34 7.1 2
(AC180333) Strongylocentrotus purpuratus clone R3-3118K19, W... 42 7.1 7
(AC131561) Rattus norvegicus clone CH230-8P16, WORKING DRAFT... 44 7.3 2
(BZ842483) CH240_227F21.TJ CHORI-240 Bos taurus genomic clon... 34 8.2 2
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 38 8.7 11
(AC184674) Strongylocentrotus purpuratus clone R3-1002N18, W... 44 9.5 4
(AL441512) T3 end of clone XBD0AA002D12 of library XBD0AA fr... 30 9.5 4
(CU466439) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 9.7 4
(FQ790233) Mycoplasma suis strain KI_3806, complete genome. 34 9.8 12
>(HH771413) Sequence 7600 from Patent EP2221382.
Length = 744
Score = 844 bits (426), Expect(3) = 0.0
Identities = 426/426 (100%)
Strand = Plus / Plus
Query: 55 tgagtggatacgttggaaacctttcaccagaacaagaacatcaattaggtattattaaat 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgagtggatacgttggaaacctttcaccagaacaagaacatcaattaggtattattaaat 61
Query: 115 ctaaaattgcagaaattaatgatccagttgtagaaaaagaaattcaacaattagatgatt 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ctaaaattgcagaaattaatgatccagttgtagaaaaagaaattcaacaattagatgatt 121
Query: 175 ctatgaccttaagatttttaagagctagaaaatggaatctaaaagattcatttgatatgc 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctatgaccttaagatttttaagagctagaaaatggaatctaaaagattcatttgatatgc 181
Query: 235 tctatgaagcattaaaattccgagcaacatttcaagatgttggagttgaaggtataacag 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tctatgaagcattaaaattccgagcaacatttcaagatgttggagttgaaggtataacag 241
Query: 295 aatcaatggttgttaatgaattaaagagtggtaagagttatttccatggtgttgataaag 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aatcaatggttgttaatgaattaaagagtggtaagagttatttccatggtgttgataaag 301
Query: 355 gtggtagaccagtttgtattgttaaaaccagtagacatgatagttacaacagagatttga 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gtggtagaccagtttgtattgttaaaaccagtagacatgatagttacaacagagatttga 361
Query: 415 atgaatcgatgagatattgtgtctacgtaatggaaaatggtaaatcaatgttaaaggacg 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 atgaatcgatgagatattgtgtctacgtaatggaaaatggtaaatcaatgttaaaggacg 421
Query: 475 gtattg 480
||||||
Sbjct: 422 gtattg 427
Score = 375 bits (189), Expect(3) = 0.0
Identities = 195/197 (98%)
Strand = Plus / Plus
Query: 593 tttaattttaaatgccccttggatctttatgggaatttggcatatcatcaaacattggtt 652
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tttaattttaaatgcaccttggatctttatgggaatttggcatatcatcaaacattggtt 605
Query: 653 agatccaaataccgcttcaaaagtttcttttgtcaaaactaaacaattggttgattatat 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 agatccaaataccgcttcaaaagtttcttttgtcaaaactaaacaattggttgattatat 665
Query: 713 tccaaaagatcaattagaaagttcttatggtggaacaagtacatttaaatatacttatga 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tccaaaagatcaattagaaagttcttatggtggaacaagtacatttaaatatacttatga 725
Query: 773 gggaaaagaagtaaagt 789
||||||||||||||||
Sbjct: 726 aggaaaagaagtaaagt 742
Score = 210 bits (106), Expect(3) = 0.0
Identities = 110/112 (98%)
Strand = Plus / Plus
Query: 482 cacttattttcgatatgtctgattttagttcaaaaaatatggnttatccnttggttaaat 541
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 437 cacttattttcgatatgtctgattttagttcaaaaaatatggattatccattggttaaat 496
Query: 542 ttatggttgaattatttcaaaagttttatccagaatcattacaaaaatgttt 593
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ttatggttgaattatttcaaaagttttatccagaatcattacaaaaatgttt 548
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 138030308
Number of Hits to DB: 1,307,182,000
Number of extensions: 82327582
Number of successful extensions: 6680730
Number of sequences better than 10.0: 69
Length of query: 846
Length of database: 128,745,918,079
Length adjustment: 24
Effective length of query: 822
Effective length of database: 125,433,190,687
Effective search space: 103106082744714
Effective search space used: 103106082744714
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home