Dictyostelium discoideum cDNA Clone SSE815

Size:		0.6k
3' sequence:	*
5' sequence:	TM980930
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSE815

AAAAAAAAAA ACAAATAAAG AAATAAAGAA ATAAAAAAAA AAAAGAAACT
TTAAAAAATG AGCCAATCAA CTGCATATAT TATTTTAAAT ATTTTAGTTA
TTTTAGCTGG TTGTTTTATA ACAGCATGTG GTATTTATTT ATTCGTTAAT
GGTTTATTCC ATAGTATTAT TGGATTTGTA CTTGGTATTT ATTATCTTTT
GGCTGGTGTT TGTATTGTAC TCCTCGAAAT CGTCTTCCCA CAAAAATTAG
TAAATCTTTT TGGTTTTTAT ACATATTGGT TTGGTAAAGG TGCTCTTATT
TCTTTAATTG GTTTATTAAT CCTTGGAAAT AGTGGATTCT TTTTAGCAGC
TGGTATTATT GTAATTGCCG TTGGTATTGT TTGTATGATT TTCCATTTCC
TTTTAGGTTG TCCACGTCCA TTAATAAATC GTAGTGTTGA AAGAAAACCA
GAACCACAAG GTCAACATGC TTAATCAATT TTTTTAATTA CTTTTTTAAA
AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA
AAAA------ ----

Translated Amino Acid Sequence SSE815

kkknk*rnkeikkkkkl*KMSQSTAYIILNILVILAGCFITACGIYLFVNGLFHSIIGFV
LGIYYLLAGVCIVLLEIVFPQKLVNLFGFYTYWFGKGALISLIGLLILGNSGFFLAAGII
VIAVGIVCMIFHFLLGCPRPLINRSVERKPEPQGQHA*siflitflkkkkkkkkkkkkkk
kkkk---

Homology SSE815 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSM468 (SSM468Q) /CSM/SS/SSM4-C/SSM468Q.Seq.d/                        860   0.0
SSH880 (SSH880Q) /CSM/SS/SSH8-D/SSH880Q.Seq.d/                        860   0.0
SSF216 (SSF216Q) /CSM/SS/SSF2-A/SSF216Q.Seq.d/                        860   0.0
SSE815 (SSE815Q) /CSM/SS/SSE8-A/SSE815Q.Seq.d/                        860   0.0
SSE703 (SSE703Q) /CSM/SS/SSE7-A/SSE703Q.Seq.d/                        860   0.0
SSD170 (SSD170Q) /CSM/SS/SSD1-C/SSD170Q.Seq.d/                        860   0.0
SSC852 (SSC852Q) /CSM/SS/SSC8-C/SSC852Q.Seq.d/                        860   0.0
SSA173 (SSA173Q) /CSM/SS/SSA1-D/SSA173Q.Seq.d/                        860   0.0
SSH447 (SSH447Q) /CSM/SS/SSH4-B/SSH447Q.Seq.d/                        833   0.0
VSJ440 (VSJ440Q) /CSM/VS/VSJ4-B/VSJ440Q.Seq.d/                        823   0.0

Homology SSE815 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


M19416|M19416.1 Slime mold (D.discoideum) membrane protein P...   841   0.0    1
X51947|X51947.1 Dictyostelium discoideum P8A7 gene.               517   0.0    2
AX344559|AX344559.1 Sequence 10 from Patent WO0200932.             34   7e-05  13
AX826130|AX826130.1 Sequence 382 from Patent WO03072821.           30   0.005  6
AX826002|AX826002.1 Sequence 254 from Patent WO03072821.           30   0.005  6
AX822490|AX822490.1 Sequence 382 from Patent EP1340818.            30   0.005  6
AX822362|AX822362.1 Sequence 254 from Patent EP1340818.            30   0.005  6
AX345219|AX345219.1 Sequence 290 from Patent WO0200928.            30   0.005  6
AX281296|AX281296.1 Sequence 38 from Patent WO0177164.             30   0.005  6
BX465859|BX465859.8 Zebrafish DNA sequence *** SEQUENCING IN...    40   0.006  8

Homology SSE815 vs Protein

Sequences producing significant alignments:                      (bits) Value


FQ790344_129(FQ790344|pid:none) Botryotinia fuckeliana isolate T...    37   0.43
AL844509_243(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    37   0.43
HM222967_56(HM222967|pid:none) Chromera velia strain CCMP2878 ch...    37   0.56
AM295250_2354(AM295250|pid:none) Staphylococcus carnosus subsp. ...    36   1.3
AF396436_38(AF396436|pid:none) Tetrahymena thermophila strain SB...    35   1.6
CP001104_1092(CP001104|pid:none) Eubacterium eligens ATCC 27750,...    35   2.8
HE612856_540(HE612856|pid:none) Tetrapisispora phaffii CBS 4417 ...    33   6.2
CP000926_1782(CP000926|pid:none) Pseudomonas putida GB-1, comple...    33   6.3
AB573180_1(AB573180|pid:none) Rhodococcus erythropolis orfV, orf...    33   6.3
CP000716_1864(CP000716|pid:none) Thermosipho melanesiensis BI429...    33   8.2

Homology SSE815 vs Genome