Dictyostelium discoideum cDNA Clone SSE707

Size:		1.3k
3' sequence:	HM971013
5' sequence:	-
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSE707

---------- AACTCTCAAC CTCGACATTC ATGCTATTGG CAAAGTCGTG
TCATGATCTT GACTTGATTC ATTATTTTAT GGGCGGAAAA AAGTGCAAGA
AAGTATCGTC ATTTGGTAGC TTGACATACT TTAAAAAGGA GAAAAAACCT
ACCAATGCTG GTAGTGCAAA GAGATGTGTA GAATGCGCAA TTAGCAAAAC
GTGTCCATAC AGTGCTCAAA AGATTTATTT AGAGCATTAT CCTTGGAAAA
GGGATGTACT AGTACCAGAT AGAGAGCCAA CAAAAGAGAA TGTTAAATTG
GCAATTGAAA ACGGTCCCTA TGGTAGATGT GTCTATGAGA GTGATAATGA
CGTAGTCGAT CAGCAAGTTG TGAATTTAGA ATTTGAAGGT GGTGCTCTCT
CCTCTTTTAG TATGGTTGCA TTCACAGAGA GTATGTGTGT ACGTAAAATT
AGAATCTTTG GTTCAATGGG TCAATTAGAA TGTAACAATG GTTATGACAT
CGTCTATGAT GACTTTAGAT TTGGTGATAA AGAAATCTTT AAACCACAAA
TAATTCAAAA TACAAAAATG TCAAATCATG GTGCTTCAGA TTATTACCTC
ATGAGATCAT TTATTTATGC AGTCTCTGAA AATGATCCAA CTCAAATTTT
ATCTGGTCCT GATGATACTC TTGCTTCTCA TAAATTAGTA TTTGAATCTG
AAAAATCAAG ATTAAAAAAT AGTGTTTTAA CTTTTTAAA

Translated Amino Acid Sequence SSE707

---LSTSTFMLLAKSCHDLDLIHYFMGGKKCKKVSSFGSLTYFKKEKKPTNAGSAKRCVE
CAISKTCPYSAQKIYLEHYPWKRDVLVPDREPTKENVKLAIENGPYGRCVYESDNDVVDQ
QVVNLEFEGGALSSFSMVAFTESMCVRKIRIFGSMGQLECNNGYDIVYDDFRFGDKEIFK
PQIIQNTKMSNHGASDYYLMRSFIYAVSENDPTQILSGPDDTLASHKLVFESEKSRLKNS
VLTF*

Homology SSE707 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSE707 (SSE707Q) /CSM/SS/SSE7-A/SSE707Q.Seq.d/                       1445   0.0
SLH457 (SLH457Q) /CSM/SL/SLH4-C/SLH457Q.Seq.d/                       1445   0.0
SSD194 (SSD194Q) /CSM/SS/SSD1-D/SSD194Q.Seq.d/                       1380   0.0
CFD357 (CFD357Q) /CSM/CF/CFD3-C/CFD357Q.Seq.d/                       1203   0.0
CHD281 (CHD281Q) /CSM/CH/CHD2-D/CHD281Q.Seq.d/                       1201   0.0
AFH865 (AFH865Q) /CSM/AF/AFH8-C/AFH865Q.Seq.d/                       1178   0.0
CFD168 (CFD168Q) /CSM/CF/CFD1-C/CFD168Q.Seq.d/                       1128   0.0
CHA155 (CHA155Q) /CSM/CH/CHA1-C/CHA155Q.Seq.d/                        995   0.0
CFI173 (CFI173Q) /CSM/CF/CFI1-D/CFI173Q.Seq.d/                        993   0.0
SSH662 (SSH662Q) /CSM/SS/SSH6-C/SSH662Q.Seq.d/                        626   e-178

Homology SSE707 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 ma...  1445   0.0    1
AL590730|AL590730.6 Human DNA sequence from clone RP11-92J19...    32   0.004  10
AL591117|AL591117.1 Human DNA sequence *** SEQUENCING IN PRO...    32   0.009  9
AP006628|AP006628.1 Onion yellows phytoplasma DNA, complete ...    32   0.061  15
AR397408|AR397408.1 Sequence 11 from patent US 6617162.            36   0.20   10
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 ma...    34   0.20   11
AC026521|AC026521.2 Homo sapiens chromosome 5 clone RP11-455...    40   0.28   5
AC006270|AC006270.1 Homo sapiens chromosome 17, clone hRPK.5...    32   0.31   9
AC068158|AC068158.3 Homo sapiens chromosome 3 clone RP11-552...    34   0.36   7
AJ010592|AJ010592.2 Guillardia theta DNA for complete sequen...    36   0.37   11

Homology SSE707 vs Protein

Sequences producing significant alignments:                      (bits) Value


CP000826_2566(CP000826|pid:none) Serratia proteamaculans 568, co...   175   2e-42
CP000298_175(CP000298|pid:none) Cryptococcus gattii WM276 chromo...   175   2e-42
AE017353_188(AE017353|pid:none) Cryptococcus neoformans var. neo...   171   4e-41
CP001634_663(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, co...   143   9e-33
CP002545_76(CP002545|pid:none) Pedobacter saltans DSM 12145, com...   142   2e-32
CP002630_1227(CP002630|pid:none) Marinithermus hydrothermalis DS...   133   1e-29
CP001656_5207(CP001656|pid:none) Paenibacillus sp. JDR-2, comple...   126   9e-28
CP002379_3487(CP002379|pid:none) Arthrobacter phenanthrenivorans...   124   3e-27
CP000001_1613(CP000001|pid:none) Bacillus cereus E33L, complete ...   122   1e-26
CP001793_556(CP001793|pid:none) Paenibacillus sp. Y412MC10, comp...   120   6e-26

Homology SSE707 vs Genome