Dictyostelium discoideum cDNA Clone SSE676

Size:		1.6k
3' sequence:	TMS971008
5' sequence:	-
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSE676

---------- GAAAATTATT CATGATGGAA AATTCACACC AGACACTAGA
TGGGCTCGTG TTTTAACCGC TATTAAAGAA GATACTTTTG GTCCACATGA
ACAATTCCAA GATATTATCA ACTCTGTTAG TGGTGGCAAT GATCATTACA
TTCTTAGTTA TGATTTTGGT TCTTACTTGG ATATTCAAAA TTCAATTGAT
CAAGATTTCA AAGATAGAGC TAAATGGGCT AAAAAATCAA TTATGGCTTC
AGTTTGTTGT GGTAAATTCA GTTCAGATAG AACCATTAAA GAGTATGCTC
AACAAATTTG GGGTATTGAA GAATGGAAGA GACCAGGTCC AGTTCCAGTT
TCAAATGAAG AAGCTCGTTC TTTATTAGTT CCACCACCAT CTGGTTCACC
AAATGATATC AATGCTATCT CAATTGAAAG ATTATCACCT TTAACTTTTG
TTAAACAAAC TTCTGCTTCT CCATTATCTG TTATCTCTGG TGGTGATAAA
ACCAACAACA CTTTAAAACC AAAACAAACT ACAAAAGGTT TTAATATTGG
TGGTCAACCA GGTAATCCAA CAAATTAATT AAATAATAAT AATAAAAAAA
GAAAAAAATA AAAAAAAAAT AAAAAAAAAA TATTTCAAAC AAAAGTAATA
AAATTAAATC AATAATTAAA AAAAT

Translated Amino Acid Sequence SSE676

---KIIHDGKFTPDTRWARVLTAIKEDTFGPHEQFQDIINSVSGGNDHYILSYDFGSYLD
IQNSIDQDFKDRAKWAKKSIMASVCCGKFSSDRTIKEYAQQIWGIEEWKRPGPVPVSNEE
ARSLLVPPPSGSPNDINAISIERLSPLTFVKQTSASPLSVISGGDKTNNTLKPKQTTKGF
NIGGQPGNPTN*lnnnnkkrkk*kknkkkifqtkviklnq*lkk

Homology SSE676 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSE676 (SSE676Q) /CSM/SS/SSE6-D/SSE676Q.Seq.d/                       1156   0.0
SHK234 (SHK234Q) /CSM/SH/SHK2-B/SHK234Q.Seq.d/                       1156   0.0
SHG849 (SHG849Q) /CSM/SH/SHG8-C/SHG849Q.Seq.d/                       1156   0.0
CHJ670 (CHJ670Q) /CSM/CH/CHJ6-C/CHJ670Q.Seq.d/                       1156   0.0
AHM406 (AHM406Q) /CSM/AH/AHM4-A/AHM406Q.Seq.d/                       1156   0.0
AHB359 (AHB359Q) /CSM/AH/AHB3-C/AHB359Q.Seq.d/                       1156   0.0
SHL184 (SHL184Q) /CSM/SH/SHL1-D/SHL184Q.Seq.d/                       1154   0.0
SHL702 (SHL702Q) /CSM/SH/SHL7-A/SHL702Q.Seq.d/                       1140   0.0
AHQ250 (AHQ250Q) /CSM/AH/AHQ2-C/AHQ250Q.Seq.d/                       1140   0.0
AHF204 (AHF204Q) /CSM/AH/AHF2-A/AHF204Q.Seq.d/                       1140   0.0

Homology SSE676 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


M77492|M77492.1 Dictyostelium discoideum glycoprotein phosph...  1156   0.0    2
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma...    42   3e-06  16
AC116988|AC116988.2 Dictyostelium discoideum chromosome 2 ma...    34   8e-06  17
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 ma...    34   1e-04  14
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma...    36   1e-04  18
AF506028|AF506028.1 Poncirus trifoliata citrus tristeza viru...    42   2e-04  9
AC115577|AC115577.2 Dictyostelium discoideum chromosome 2 ma...    34   0.001  15
AX344555|AX344555.1 Sequence 6 from Patent WO0200932.              38   0.002  12
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 ma...    34   0.006  14
BX927387|BX927387.2 Zebrafish DNA sequence *** SEQUENCING IN...    32   0.007  7

Homology SSE676 vs Protein

Sequences producing significant alignments:                      (bits) Value


EU165056_1(EU165056|pid:none) Cyanophora paradoxa starch phospho...    98   4e-19
CR954204_212(CR954204|pid:none) Ostreococcus tauri strain OTTH05...    95   2e-18
AY098895_1(AY098895|pid:none) Citrus hybrid cultivar starch phos...    93   1e-17
CP000584_198(CP000584|pid:none) Ostreococcus lucimarinus CCE9901...    92   3e-17
HQ009843_1(HQ009843|pid:none) Gunnera manicata starch phosphoryl...    91   5e-17
CP001330_331(CP001330|pid:none) Micromonas sp. RCC299 chromosome...    91   6e-17
DQ279079_1(DQ279079|pid:none) Chlamydomonas reinhardtii PhoA (PH...    90   8e-17
(Q9SD76) RecName: Full=Alpha-glucan phosphorylase, H isozyme;   ...    89   1e-16
FN564427_4(FN564427|pid:none) Triticum aestivum chromosome 3B-sp...    89   1e-16
AK103367_1(AK103367|pid:none) Oryza sativa Japonica Group cDNA c...    89   2e-16

Homology SSE676 vs Genome