Homology SSE676 vs DNA
Query= SSE676 (SSE676Q) /CSM/SS/SSE6-D/SSE676Q.Seq.d/
(675 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/a/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/a/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; ddbjrod9.seq; /db/DDBJNEW.DATA/a/new_ddbjrod.seq;
ddbjmam.seq; /db/DDBJNEW.DATA/a/new_ddbjmam.seq; ddbjvrt1.seq;
ddbjvrt2.seq; ddbjvrt3.seq; /db/DDBJNEW.DATA/a/new_ddbjvrt.seq;
ddbjinv1.seq; ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/a/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/a/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
ddbjbct7.seq; /db/DDBJNEW.DATA/a/new_ddbjbct.seq; ddbjvrl1.seq;
ddbjvrl2.seq; ddbjvrl3.seq; /db/DDBJNEW.DATA/a/new_ddbjvrl.seq;
ddbjphg.seq; /db/DDBJNEW.DATA/a/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/a/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss65.seq;
ddbjgss66.seq; ddbjgss67.seq; ddbjgss68.seq; ddbjgss69.seq;
ddbjgss7.seq; ddbjgss70.seq; ddbjgss71.seq; ddbjgss72.seq;
ddbjgss73.seq; ddbjgss74.seq; ddbjgss75.seq; ddbjgss8.seq;
ddbjgss9.seq; /db/DDBJNEW.DATA/a/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss2.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg6.seq; ddbjhtg7.seq; ddbjhtg8.seq; ddbjhtg9.seq;
/db/DDBJNEW.DATA/a/new_ddbjhtg1.seq; ddbjpat1.seq; ddbjpat2.seq;
ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq; ddbjpat6.seq; ddbjpat7.seq;
ddbjpat8.seq; ddbjpat9.seq; /db/DDBJNEW.DATA/a/new_ddbjpat.seq;
ddbjsts1.seq; ddbjsts2.seq; ddbjsts3.seq;
/db/DDBJNEW.DATA/a/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/a/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/a/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/a/new_est_btra1.seq; est_cele1.seq;
/db/DDBJNEW.DATA/a/new_est_cele1.seq; est_crei1.seq; est_cint1.seq;
/db/DDBJNEW.DATA/a/new_est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/a/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/a/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/a/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/a/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/a/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/a/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/a/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/a/new_est_mous1.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/a/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/a/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/a/new_est_rnor1.seq; est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/a/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/a/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/a/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
est_rest3.seq; /db/DDBJNEW.DATA/a/new_est_rest1.seq
32,086,031 sequences; U,403,806,460 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
M77492|M77492.1 Dictyostelium discoideum glycoprotein phosph... 1156 0.0 2
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma... 42 3e-06 16
AC116988|AC116988.2 Dictyostelium discoideum chromosome 2 ma... 34 8e-06 17
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 ma... 34 1e-04 14
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma... 36 1e-04 18
AF506028|AF506028.1 Poncirus trifoliata citrus tristeza viru... 42 2e-04 9
AC115577|AC115577.2 Dictyostelium discoideum chromosome 2 ma... 34 0.001 15
AX344555|AX344555.1 Sequence 6 from Patent WO0200932. 38 0.002 12
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 ma... 34 0.006 14
BX927387|BX927387.2 Zebrafish DNA sequence *** SEQUENCING IN... 32 0.007 7
AC101183|AC101183.1 Mus musculus clone RP23-176D22, LOW-PASS... 42 0.008 2
BX323800|BX323800.4 Zebrafish DNA sequence *** SEQUENCING IN... 44 0.012 5
AC116100|AC116100.2 Dictyostelium discoideum chromosome 2 ma... 44 0.026 6
AC115584|AC115584.2 Dictyostelium discoideum chromosome 2 ma... 34 0.027 8
BX927238|BX927238.2 Zebrafish DNA sequence *** SEQUENCING IN... 36 0.035 6
AL713923|AL713923.2 Human DNA sequence from clone RP11-143G3... 42 0.037 5
BX005101|BX005101.8 Zebrafish DNA sequence from clone CH211-... 32 0.038 8
BX511268|BX511268.4 Zebrafish DNA sequence *** SEQUENCING IN... 42 0.039 6
BE470067|BE470067.1 IpHdk03092 Head kidney cDNA library Icta... 50 0.041 1
AJ226749|AJ226749.1 Ciona intestinalis genomic fragment, clo... 50 0.041 1
AC117072|AC117072.2 Dictyostelium discoideum chromosome 2 ma... 42 0.048 11
AE014819|AE014819.1 Plasmodium falciparum 3D7 chromosome 14 ... 38 0.049 9
AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 ma... 34 0.050 13
BU724618|BU724618.1 SJMBJA09 SJM Schistosoma japonicum cDNA,... 30 0.054 4
BU715216|BU715216.1 SJMBUE06 SJM Schistosoma japonicum cDNA,... 30 0.069 4
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 ma... 34 0.076 12
BX569794|BX569794.4 Zebrafish DNA sequence *** SEQUENCING IN... 36 0.077 7
AL844509|AL844509.1 Plasmodium falciparum chromosome 13. 36 0.081 23
BX255915|BX255915.4 Zebrafish DNA sequence *** SEQUENCING IN... 34 0.087 7
AL034557|AL034557.8 Plasmodium falciparum MAL4P1. 34 0.092 12
AC126675|AC126675.4 Mus musculus BAC clone RP23-430P11 from ... 36 0.095 5
AC114403|AC114403.15 Mus musculus chromosome 1, clone RP23-1... 38 0.12 6
AC115599|AC115599.2 Dictyostelium discoideum chromosome 2 ma... 34 0.12 10
AC068650|AC068650.4 Mus musculus clone RP23-73D5, WORKING DR... 44 0.12 7
U53149|U53149.1 Caenorhabditis elegans cosmid C24B5, complet... 36 0.14 4
BX545847|BX545847.3 Zebrafish DNA sequence *** SEQUENCING IN... 36 0.14 7
AX251513|AX251513.1 Sequence 481 from Patent WO0168912. 48 0.16 1
AC093961|AC093961.5 Rattus norvegicus clone CH230-4H22, WORK... 34 0.18 7
BX571883|BX571883.3 Zebrafish DNA sequence from clone DKEY-1... 34 0.20 6
AC094975|AC094975.11 Rattus norvegicus chromosome 18 clone C... 34 0.20 7
AC115607|AC115607.2 Dictyostelium discoideum chromosome 2 ma... 32 0.21 9
AL954187|AL954187.5 Zebrafish DNA sequence from clone CH211-... 36 0.24 8
AP001119|AP001119.1 Buchnera aphidicola str. APS (Acyrthosip... 34 0.26 11
AE014837|AE014837.1 Plasmodium falciparum 3D7 chromosome 11 ... 30 0.29 11
AL928980|AL928980.7 Zebrafish DNA sequence from clone DKEY-7... 42 0.29 4
AX346535|AX346535.1 Sequence 1606 from Patent WO0200928. 30 0.31 6
AP003362|AP003362.2 Staphylococcus aureus subsp. aureus Mu50... 36 0.31 11
AC116977|AC116977.2 Dictyostelium discoideum chromosome 2 ma... 30 0.32 11
AL356366|AL356366.7 Human DNA sequence *** SEQUENCING CANCEL... 42 0.36 6
AX344565|AX344565.1 Sequence 16 from Patent WO0200932. 30 0.37 10
AC127834|AC127834.3 Rattus norvegicus clone CH230-310P20, WO... 42 0.38 5
AL844506|AL844506.1 Plasmodium falciparum chromosome 7. 32 0.39 19
AC117070|AC117070.2 Dictyostelium discoideum chromosome 2 ma... 30 0.39 10
AE014850|AE014850.1 Plasmodium falciparum 3D7 chromosome 12,... 36 0.40 9
BX005444|BX005444.11 Zebrafish DNA sequence *** SEQUENCING I... 42 0.40 6
AL049525|AL049525.1 Arabidopsis thaliana DNA chromosome 4, B... 36 0.40 6
BX323467|BX323467.5 Zebrafish DNA sequence *** SEQUENCING IN... 40 0.40 7
AP003515|AP003515.1 Clostridium perfringens str. 13 plasmid ... 34 0.41 6
BX682551|BX682551.5 Zebrafish DNA sequence from clone CH211-... 32 0.44 7
AL772163|AL772163.7 Zebrafish DNA sequence from clone CH211-... 32 0.46 9
AP006628|AP006628.1 Onion yellows phytoplasma DNA, complete ... 30 0.49 19
AC148058|AC148058.1 Callicebus moloch clone LB5-358H21, WORK... 42 0.50 5
AL929183|AL929183.12 Zebrafish DNA sequence from clone CH211... 36 0.50 6
AL929352|AL929352.1 Plasmodium falciparum strain 3D7, chromo... 36 0.51 9
AX344889|AX344889.1 Sequence 314 from Patent WO0200927. 34 0.51 3
AR409405|AR409405.1 Sequence 1 from patent US 6632935. 34 0.51 14
BD061520|BD061520.1 Genome DNA of symbiotic bacteria of aphid. 34 0.51 14
AC117076|AC117076.2 Dictyostelium discoideum chromosome 2 ma... 32 0.52 9
AL935030|AL935030.9 Zebrafish DNA sequence from clone CH211-... 34 0.52 7
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 ma... 36 0.53 14
AF080118|AF080118.1 Arabidopsis thaliana BAC F8M12. 36 0.54 6
AC125473|AC125473.12 Medicago truncatula clone mth2-8j13, co... 30 0.55 6
BX548066|BX548066.3 Zebrafish DNA sequence from clone CH211-... 38 0.56 6
AC113732|AC113732.8 Rattus norvegicus clone CH230-210M17, WO... 42 0.59 5
BX510917|BX510917.4 Zebrafish DNA sequence *** SEQUENCING IN... 36 0.60 7
AL845544|AL845544.11 Zebrafish DNA sequence from clone BUSM1... 34 0.60 5
AC093434|AC093434.1 Homo sapiens chromosome 1 clone RP11-100... 46 0.64 1
AC106389|AC106389.4 Rattus norvegicus clone CH230-140G24, WO... 46 0.64 1
AP001561|AP001561.4 Homo sapiens genomic DNA, chromosome 11q... 46 0.64 1
AL358939|AL358939.9 Human DNA sequence from clone RP11-100D1... 46 0.64 1
AC106668|AC106668.4 Rattus norvegicus clone CH230-101D9, ***... 46 0.64 1
BE021617|BE021617.1 sm60c03.y1 Gm-c1028 Glycine max cDNA clo... 46 0.64 1
AW620673|AW620673.1 sj08c01.y1 Gm-c1032 Glycine max cDNA clo... 46 0.64 1
AC111639|AC111639.4 Rattus norvegicus clone CH230-100I8, ***... 46 0.64 1
BI971157|BI971157.1 GM830012B10F11 Gm-r1083 Glycine max cDNA... 46 0.64 1
AX826059|AX826059.1 Sequence 311 from Patent WO03072821. 46 0.64 1
AX822419|AX822419.1 Sequence 311 from Patent EP1340818. 46 0.64 1
AC016517|AC016517.4 Homo sapiens clone RP11-20H14, WORKING D... 46 0.64 1
AX344572|AX344572.1 Sequence 23 from Patent WO0200932. 46 0.64 8
AC134570|AC134570.5 Mus musculus BAC clone RP24-252B18 from ... 34 0.67 7
AP006363|AP006363.1 Lotus corniculatus var. japonicus genomi... 38 0.69 4
AL590964|AL590964.8 Human DNA sequence from clone RP11-505O1... 32 0.72 6
AL929048|AL929048.9 Zebrafish DNA sequence from clone CH211-... 36 0.74 6
AC126014|AC126014.5 Medicago truncatula clone mth2-18j5, com... 30 0.76 6
L36901|L36901.1 Saccharomyces cerevisiae mitochondrion DNA s... 42 0.77 2
AC091484|AC091484.8 Mus musculus chromosome 17 clone rp23-38... 38 0.82 6
AC130805|AC130805.12 Medicago truncatula clone mth2-9n1, WOR... 30 0.82 9
AC139670|AC139670.11 Medicago truncatula clone mth2-9n1, com... 30 0.82 9
BX546488|BX546488.5 Zebrafish DNA sequence *** SEQUENCING IN... 36 0.87 7
AX344559|AX344559.1 Sequence 10 from Patent WO0200932. 30 0.90 11
>M77492|M77492.1 Dictyostelium discoideum glycoprotein phosphorylase 2
(glpD) gene, complete cds.
Length = 3594
Score = 1156 bits (583), Expect(2) = 0.0
Identities = 583/583 (100%)
Strand = Plus / Plus
Query: 11 gaaaattattcatgatggaaaattcacaccagacactagatgggctcgtgttttaaccgc 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2900 gaaaattattcatgatggaaaattcacaccagacactagatgggctcgtgttttaaccgc 2959
Query: 71 tattaaagaagatacttttggtccacatgaacaattccaagatattatcaactctgttag 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2960 tattaaagaagatacttttggtccacatgaacaattccaagatattatcaactctgttag 3019
Query: 131 tggtggcaatgatcattacattcttagttatgattttggttcttacttggatattcaaaa 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3020 tggtggcaatgatcattacattcttagttatgattttggttcttacttggatattcaaaa 3079
Query: 191 ttcaattgatcaagatttcaaagatagagctaaatgggctaaaaaatcaattatggcttc 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3080 ttcaattgatcaagatttcaaagatagagctaaatgggctaaaaaatcaattatggcttc 3139
Query: 251 agtttgttgtggtaaattcagttcagatagaaccattaaagagtatgctcaacaaatttg 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3140 agtttgttgtggtaaattcagttcagatagaaccattaaagagtatgctcaacaaatttg 3199
Query: 311 gggtattgaagaatggaagagaccaggtccagttccagtttcaaatgaagaagctcgttc 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3200 gggtattgaagaatggaagagaccaggtccagttccagtttcaaatgaagaagctcgttc 3259
Query: 371 tttattagttccaccaccatctggttcaccaaatgatatcaatgctatctcaattgaaag 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3260 tttattagttccaccaccatctggttcaccaaatgatatcaatgctatctcaattgaaag 3319
Query: 431 attatcacctttaacttttgttaaacaaacttctgcttctccattatctgttatctctgg 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3320 attatcacctttaacttttgttaaacaaacttctgcttctccattatctgttatctctgg 3379
Query: 491 tggtgataaaaccaacaacactttaaaaccaaaacaaactacaaaaggttttaatattgg 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3380 tggtgataaaaccaacaacactttaaaaccaaaacaaactacaaaaggttttaatattgg 3439
Query: 551 tggtcaaccaggtaatccaacaaattaattaaataataataat 593
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3440 tggtcaaccaggtaatccaacaaattaattaaataataataat 3482
Score = 73.8 bits (37), Expect(2) = 0.0
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 631 tatttcaaacaaaagtaataaaattaaatcaataatt 667
|||||||||||||||||||||||||||||||||||||
Sbjct: 3520 tatttcaaacaaaagtaataaaattaaatcaataatt 3556
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 21,077,574
Number of Sequences: 32086031
Number of extensions: 21077574
Number of successful extensions: 1870479
Number of sequences better than 10.0: 657
length of query: 675
length of database: U,403,806,460
effective HSP length: 22
effective length of query: 653
effective length of database: T,697,913,778
effective search space: 23963737697034
effective search space used: 23963737697034
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home