Dictyostelium discoideum cDNA Clone SSE288

Size:		1.4k
3' sequence:	TS980501
5' sequence:	*
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSE288

---------- TAGGATTAGC GGATCAAAAT TTTTAATCGA TGAAATTCAA
TCAAAATTCG ATAAAGGTTT AATTACTTCA GTTGAAGATT TAGATCCAAA
TTGGATTTAT GAAGTTGCAT GTATTTTCAA ATCATATTTT AGATATTTAC
CTCATTCAGT TATTCCAGAT GAACAAATTA CAGAATTTTA TAGAATTCAA
AATAATATTA CAGATGCAAC TGAAAAAGCA GCAGCATTAA AAGCAGTTGT
TAATTCAATT CCAAATTTCC AATATACAAT TCTTTATGAA TGTATATCTT
TATTACATGA TATTTCATTA AACTCTAAAG AAAATTTAAT GACTCCAAGT
AATTTATCAA TTGTATATGG CCCTAGTTTA TTAAGACCAA ATATTGAAAA
AGGTGACATC CAAGAAATTG CAAATGCAAA TACTATTGTA TTTAATTTAA
TTTCATTCTT TCAACAAATT TTTATCAAAA ATCCTGATCC TTCAATTTTA
GAGATTGAAC ATCCAATTAC TCCAATTAAA CCAATGATTC AAAAATAATA
ATAATAATTA TAATAATAAC

Translated Amino Acid Sequence SSE288

---RISGSKFLIDEIQSKFDKGLITSVEDLDPNWIYEVACIFKSYFRYLPHSVIPDEQIT
EFYRIQNNITDATEKAAALKAVVNSIPNFQYTILYECISLLHDISLNSKENLMTPSNLSI
VYGPSLLRPNIEKGDIQEIANANTIVFNLISFFQQIFIKNPDPSILEIEHPITPIKPMIQ
K****l***

Homology SSE288 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSE288 (SSE288Q) /CSM/SS/SSE2-D/SSE288Q.Seq.d/                       1057   0.0
VFM808 (VFM808Q) /CSM/VF/VFM8-A/VFM808Q.Seq.d/                       1031   0.0
AFO490 (AFO490Q) /CSM/AF/AFO4-D/AFO490Q.Seq.d/                        967   0.0
VSC242 (VSC242Q) /CSM/VS/VSC2-B/VSC242Q.Seq.d/                        902   0.0
SSF555 (SSF555Q) /CSM/SS/SSF5-C/SSF555Q.Seq.d/                        793   0.0
VHQ474 (VHQ474Q) /CSM/VH/VHQ4-D/VHQ474Q.Seq.d/                         42   0.009
VHP119 (VHP119Q) /CSM/VH/VHP1-A/VHP119Q.Seq.d/                         42   0.009
VFF559 (VFF559Q) /CSM/VF/VFF5-C/VFF559Q.Seq.d/                         42   0.009
SFB208 (SFB208Q) /CSM/SF/SFB2-A/SFB208Q.Seq.d/                         42   0.009
AHJ593 (AHJ593Q) /CSM/AH/AHJ5-D/AHJ593Q.Seq.d/                         42   0.009

Homology SSE288 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AL844509|AL844509.1 Plasmodium falciparum chromosome 13.           32   6e-08  28
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma...    36   6e-07  17
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma...    34   1e-06  18
AL953840|AL953840.8 Mouse DNA sequence from clone RP23-152F6...    34   2e-06  8
AL807770|AL807770.17 Mouse DNA sequence from clone RP23-206L...    34   2e-05  8
AE014847|AE014847.1 Plasmodium falciparum 3D7 chromosome 12,...    36   2e-05  12
AC122453|AC122453.4 Mus musculus BAC clone RP24-258A18 from ...    34   3e-05  8
AC123691|AC123691.3 Mus musculus clone RP23-325O11, WORKING ...    34   5e-05  8
AF165818|AF165818.4 Guillardia theta nucleomorph chromosome ...    34   7e-05  12
AC102866|AC102866.2 Mus musculus clone RP24-576L9, WORKING D...    40   7e-05  7

Homology SSE288 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54PG5) RecName: Full=Rho GTPase-activating protein gacC; AltNa...   357   2e-97
BT072468_1(BT072468|pid:none) Salmo salar clone ssal-rgf-526-265...    74   3e-12
BX005226_1(BX005226|pid:none) Zebrafish DNA sequence from clone ...    74   5e-12
(Q54FG5) RecName: Full=Rho GTPase-activating protein gacJJ; AltN...    74   5e-12
CR790375_4(CR790375|pid:none) Zebrafish DNA sequence from clone ...    71   3e-11
AY313783_1(AY313783|pid:none) Gallus gallus Rho GTPase activatin...    70   6e-11
AF159851_1(AF159851|pid:none) Homo sapiens Rho GAP p190-A mRNA, ...    70   6e-11
BC068777_1(BC068777|pid:none) Xenopus laevis hypothetical protei...    70   6e-11
AX056907_1(AX056907|pid:none) Sequence 47 from Patent WO0075320....    70   7e-11
AB007871_1(AB007871|pid:none) Homo sapiens KIAA0411 mRNA, partia...    70   7e-11

Homology SSE288 vs Genome