Dictyostelium discoideum cDNA Clone SSE238

Size:		0.8k
3' sequence:	*
5' sequence:	TS981207
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSE238

GTGTTATTAA ATTGTTAGAA AATATTAAAA TTAAAAAATG GATTGTGCAA
TTACAAAAGA TGTAGAGGAT ATGTTAAGAA AATTTGATTC AAATGGTGAT
GGTAATATTA CATTTGATGA AGCTGTAAAA CGTTTGAAGG AAACCGGTTC
AAAAGATCCA TTACGTGCTG CCTCTTCAAT GTTTATTTCT CTTGATAAGG
ATAAGGATGG AATTATTTCA ATAAAAGAGA TTCATGGCCA TAAGGCTGAT
GTTGCTGCAA AGAAATTGCA AAAGGCAATT AACAACATCT GTAACAACTT
CTTGAAAGGC TATGACACTG ATAAGGATGG AAGGATCTCA TGGGATGAAG
TATGCAATTG GGTAAATAAA AACAATCCAG ATGCAATTGC TCCACTTATG
ATTGTTGAAA ATTTCTTTAG TGAATTGGAT AAAGATAATG ACAGATTCGT
AACCAAGTGT GAACTTCAGG AGTACGTTAC TAAATACAAA AGTCTCCCAG
AACAATAAAT AATTTATTGT TCAAATTCAA TAATTATTAA TCAACATTTA
TAATTTTCAT TTT------- ---

Translated Amino Acid Sequence SSE238

cy*ivrky*n*KMDCAITKDVEDMLRKFDSNGDGNITFDEAVKRLKETGSKDPLRAASSM
FISLDKDKDGIISIKEIHGHKADVAAKKLQKAINNICNNFLKGYDTDKDGRISWDEVCNW
VNKNNPDAIAPLMIVENFFSELDKDNDRFVTKCELQEYVTKYKSLPEQ*iiycsnsiiin
qhl*fsf---

Homology SSE238 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSE238 (SSE238Q) /CSM/SS/SSE2-B/SSE238Q.Seq.d/                       1116   0.0
SHI672 (SHI672Q) /CSM/SH/SHI6-C/SHI672Q.Seq.d/                       1116   0.0
SHC769 (SHC769Q) /CSM/SH/SHC7-C/SHC769Q.Seq.d/                       1116   0.0
SHB594 (SHB594Q) /CSM/SH/SHB5-D/SHB594Q.Seq.d/                       1116   0.0
SFK143 (SFK143Q) /CSM/SF/SFK1-B/SFK143Q.Seq.d/                       1116   0.0
CHH835 (CHH835Q) /CSM/CH/CHH8-B/CHH835Q.Seq.d/                       1116   0.0
CHD101 (CHD101Q) /CSM/CH/CHD1-A/CHD101Q.Seq.d/                       1116   0.0
AHR477 (AHR477Q) /CSM/AH/AHR4-D/AHR477Q.Seq.d/                       1116   0.0
AHF620 (AHF620Q) /CSM/AH/AHF6-A/AHF620Q.Seq.d/                       1116   0.0
AHE279 (AHE279Q) /CSM/AH/AHE2-D/AHE279Q.Seq.d/                       1116   0.0

Homology SSE238 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


X82784|X82784.1 D.discoideum mRNA for calcium binding protein.   1067   0.0    1
AC116987|AC116987.2 Dictyostelium discoideum chromosome 2 ma...   989   0.0    5
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma...    36   4e-07  16
AL844505|AL844505.1 Plasmodium falciparum chromosome  6.           36   3e-05  21
AL929352|AL929352.1 Plasmodium falciparum strain 3D7, chromo...    38   3e-05  13
AE014831|AE014831.1 Plasmodium falciparum 3D7 chromosome 10 ...    36   6e-05  12
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 ma...    36   1e-04  13
AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 ma...    36   2e-04  12
AC117176|AC117176.2 Dictyostelium discoideum chromosome 2 ma...    32   3e-04  11
AC006279|AC006279.8 Plasmodium falciparum chromosome 12 clon...    38   5e-04  8

Homology SSE238 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P54653) RecName: Full=Calcium-binding protein 2;  &S62881(S6288...    79   1e-13
(Q966Q9) RecName: Full=Calcium-binding protein H; AltName: Full=...    69   1e-10
(Q869S9) RecName: Full=Calcium-binding protein E; AltName: Full=...    69   1e-10
AB070447_1(AB070447|pid:none) Dictyostelium discoideum cbpE mRNA...    69   1e-10
AJ297597_1(AJ297597|pid:none) Dictyostelium discoideum mRNA for ...    67   4e-10
(Q54RF4) RecName: Full=Calcium-binding protein 4a;                     67   4e-10
FO081579_3(FO081579|pid:none) Caenorhabditis elegans Cosmid K03A...    58   2e-07
CP002585_4401(CP002585|pid:none) Pseudomonas brassicacearum subs...    58   3e-07
(P09485) RecName: Full=Calcium-binding protein LPS1-alpha;             57   5e-07
CR940353_624(CR940353|pid:none) Theileria annulata strain Ankara...    56   1e-06

Homology SSE238 vs Genome