Dictyostelium discoideum cDNA Clone SSC864

Size:		1.3k
3' sequence:	RY980313
5' sequence:	*
Whole insert?:	*
Accession #:	
Remarks:	*

Sequence SSC864

---------- GAAGATCAGT AGTTCAATGA TTTTAGCAAC TGATATGCAA
AATCATTTTG AACATACTAA TAAATTTCAA CATCATTTAA ATAATTTACC
ATTTGATAGA AATAAAAAAG AAGATAGACA AATGATTTTA AATTTCTTAA
TAAAGTGCGG TGATATTTCA AATATTGCAA GACCATGGCA TTTAAATTTT
GAATGGTCTT TAAGAGTTTC AGATGAATTT TTCCAACAAT CACATTATGA
AACTATTTGT GGTTATCCAG TTACACCATT TATGGATAAA ACCAAAACCA
CAAGAGCAAG AATCGCAGCG GATTTCATAG ATTTCGTTGC ATCACCTCTT
TTCCAAAGTA TGGCAAAGTT CTTAAAAGAA AGTCAATTCC TATTAAAGGT
AATTAGTAAA AATCGTGAAA ATTGGCAAGC ATACATGGAA TTACAAAAAG
AAGGTAAATG TAATGATGAT GATCTCCAAT TTATGGAAGA TCCAACAATT
TTGGTTAAAT CAAAATTACC AAAAATTGAT GAAGAAGAAA ATAGAGATAA
AGTTTCTTCA TCATCATCTT CTTCGACCGC TCCTTTAACT TCAACTTCTT
CTTCAAATAA TGAAACTTCA TCATCATAAA AAAATTAAC

Translated Amino Acid Sequence SSC864

---KISSSMILATDMQNHFEHTNKFQHHLNNLPFDRNKKEDRQMILNFLIKCGDISNIAR
PWHLNFEWSLRVSDEFFQQSHYETICGYPVTPFMDKTKTTRARIAADFIDFVASPLFQSM
AKFLKESQFLLKVISKNRENWQAYMELQKEGKCNDDDLQFMEDPTILVKSKLPKIDEEEN
RDKVSSSSSSSTAPLTSTSSSNNETSSS*kn*

Homology SSC864 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSC864 (SSC864Q) /CSM/SS/SSC8-C/SSC864Q.Seq.d/                       1223   0.0
CHE574 (CHE574Q) /CSM/CH/CHE5-D/CHE574Q.Seq.d/                       1187   0.0
CHO868 (CHO868Q) /CSM/CH/CHO8-C/CHO868Q.Seq.d/                       1162   0.0
AFO157 (AFO157Q) /CSM/AF/AFO1-C/AFO157Q.Seq.d/                       1146   0.0
VHH728 (VHH728Q) /CSM/VH/VHH7-B/VHH728Q.Seq.d/                       1100   0.0
VHC772 (VHC772Q) /CSM/VH/VHC7-C/VHC772Q.Seq.d/                        997   0.0
CHN464 (CHN464Q) /CSM/CH/CHN4-C/CHN464Q.Seq.d/                        987   0.0
CHG467 (CHG467Q) /CSM/CH/CHG4-C/CHG467Q.Seq.d/                        682   0.0
SHF214 (SHF214Q) /CSM/SH/SHF2-A/SHF214Q.Seq.d/                        454   e-127
CHH750 (CHH750Q) /CSM/CH/CHH7-C/CHH750Q.Seq.d/                        391   e-107

Homology SSC864 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(C93964) Dictyostelium discoideum slug cDNA, clone SSC864.       1221   0.0    1
(BJ378382) Dictyostelium discoideum cDNA clone:ddc31c19, 3' ...  1156   0.0    3
(BJ345911) Dictyostelium discoideum cDNA clone:dda29a15, 3' ...  1055   0.0    3
(BJ385037) Dictyostelium discoideum cDNA clone:ddc51h18, 3' ...   987   0.0    4
(U60170) Dictyostelium discoideum RegA (regA) gene, complete...   944   0.0    3
(AJ005398) Dictyostelium discoideum regA gene.                    944   0.0    3
(BJ441316) Dictyostelium discoideum cDNA clone:ddv46h07, 3' ...   995   0.0    3
(BJ438215) Dictyostelium discoideum cDNA clone:ddv36p17, 3' ...   977   0.0    2
(BJ384234) Dictyostelium discoideum cDNA clone:ddc48p16, 3' ...   987   0.0    1
(BJ379348) Dictyostelium discoideum cDNA clone:ddc34f18, 3' ...   682   0.0    1

Homology SSC864 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q23917) RecName: Full=3',5'-cyclic-nucleotide phosphodiesterase...   366   e-100
(O70628) RecName: Full=High affinity cGMP-specific 3',5'-cyclic ...    97   6e-19
AK168143_1(AK168143|pid:none) Mus musculus CRL-1722 L5178Y-R cDN...    97   6e-19
HE573026_1276(HE573026|pid:none) Trypanosoma vivax Y486 annotate...    96   2e-18
BC135159_1(BC135159|pid:none) Xenopus tropicalis phosphodiestera...    94   5e-18
AX876461_1(AX876461|pid:none) Sequence 11366 from Patent EP10746...    92   2e-17
FQ310508_199(FQ310508|pid:none) Dicentrarchus labrax chromosome ...    92   2e-17
AY196312_1(AY196312|pid:none) Homo sapiens phosphodiesterase PDE...    91   4e-17
FJ914626_1(FJ914626|pid:none) Macaca mulatta cGMP-specific phosp...    91   4e-17
AY196301_1(AY196301|pid:none) Homo sapiens phosphodiesterase PDE...    91   4e-17

Homology SSC864 vs Genome