Homology SSC794 vs Protein

Query= SSC794 (SSC794Q) /CSM/SS/SSC7-D/SSC794Q.Seq.d/
         (317 letters)

Database: nrp_B
           5,349,213 sequences; 1,732,582,204 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(P13773) RecName: Full=Cyclic AMP receptor 1;          Short=cAM...   123   4e-27
CP002545_1991(CP002545|pid:none) Pedobacter saltans DSM 12145, c...    37   0.27
CP000923_1325(CP000923|pid:none) Thermoanaerobacter sp. X514, co...    33   6.7
AL844504_308(AL844504|pid:none) Plasmodium falciparum 3D7 chromo...    33   6.7
AC165446_30(AC165446|pid:none) Medicago truncatula clone mth2-61...    33   6.7
CP001681_2954(CP001681|pid:none) Pedobacter heparinus DSM 2366, ...    33   6.7
AF288092_35(AF288092|pid:none) Naegleria gruberi mitochondrial D...    33   6.7
CP002157_1759(CP002157|pid:none) Maribacter sp. HTCC2170, comple...    32   8.8

>(P13773) RecName: Full=Cyclic AMP receptor 1;          Short=cAMP
           receptor 1;  &A41238(A41238;A38589)
           &AC116330_22(AC116330|pid:none)
           &M21824_1(M21824|pid:none)
          Length = 392

 Score =  123 bits (308), Expect = 4e-27
 Identities = 62/88 (70%), Positives = 62/88 (70%)
 Frame = +1

Query: 40  RGTSGKTMGGHPTGDDVQCSSDMEQCSLERHPNMVXXXXXXXXXXXXXXXXXDEGXXXXX 219
           RGTSGKTMGGHPTGDDVQCSSDMEQCSLERHPNMV                 DEG
Sbjct: 305 RGTSGKTMGGHPTGDDVQCSSDMEQCSLERHPNMVNNQQNLNNNYGLQQNYNDEGSSSSS 364

Query: 220 XXXXDEEKQTVEMQNIQISTSTNGQGNN 303
               DEEKQTVEMQNIQISTSTNGQGNN
Sbjct: 365 LSSSDEEKQTVEMQNIQISTSTNGQGNN 392

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 727,609,323
Number of extensions: 12542901
Number of successful extensions: 30300
Number of sequences better than 10.0: 8
Number of HSP's gapped: 30267
Number of HSP's successfully gapped: 8
Length of query: 105
Length of database: 1,732,582,204
Length adjustment: 73
Effective length of query: 32
Effective length of database: 1,342,089,655
Effective search space: 42946868960
Effective search space used: 42946868960
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 28 (15.4 bits)