Dictyostelium discoideum cDNA Clone SSC426

Size:		851
3' sequence:	MY971122
5' sequence:	TM981124
Whole insert?:	Y
Accession #:	
Remarks:	*

Sequence SSC426

TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT AATTTTTTAA AAAATTTTTT
TATTTTTTTT TTTTTTTTNT TTNNTNNTTA NTTTTTTATT TTTTTCNNAN
TNANTTTAAT TTTNGATTAN NTTAATTTGA ATCATAATTA AATATATCGG
TATTCCAGGA TCCGAATTCC ATCAAGCTTT TTACCCAGAA GATGGATGGG
AATTTANTTA CTACCCAGAA TCTGGGTGGT GGTGGACCAG TATTCTGTAC
AATAGACCTT CCAATTGAAC TGGATCATAA GTTAAACCAC ATGGAACATG
AAGATGGATC TTGAACAGAT ATACATGTTT TATTTTCAAA TGTATATAAA
CCATTACAAG TGAGTGCTTT TGGTACCCAA ACATAACAAT TGAGTGAAAT
TGAAGCTAAA ATTACACAAC CAGCTAAAAG GAAGATAAGG TATTTGAATT
TTGGATGAAT TCTATCATCT TGATCTCTCC ACCATTTAAC TAATAAGGCT
AATGATCCAA ATATAACAAT AATAGTACCA ACTAATACAA AATGTCTTGC
ATTTACTTTA ATTCCAAAAT ATACACCAAT TGCTATTGAG AACAATGAAA
AAGCTGCAAC AATTATAGAA ATAATAATTT GAGAAATTTG TGTTTGTTTC
TTTCTCTCTC CAAATAATGG TCTCTCCAAA TAATGGTTCA TCCATTTTNA
TTTACTATAT TATATATATA TATAAATATT TATATGATAT TACAACAAAA
AAAAAAAAAA GAAATAGAGA AAACCAAAGC AATTTAAAAT AATACAAAAG
ACTAGTTCTA GATCGCGAGC GGCCGCCACC GCGGTGGAGC TCCAATTCGC
CCTA

Translated Amino Acid Sequence SSC426

fffffffff*ffkkffyfffffxxxlxfyffxxxfnfxlx*fes*LNISVFQDPNSIKLF
TQKMDGNLXTTQNLGGGGPVFCTIDLPIELDHKLNHMEHEDGS*tdihvlfsnvykplqv
safgtqt*qlseieakitqpakrkirylnfg*ilss*slhhltnkandpnitiivptntk
claftlipkytpiaiennekaatiieiii*eicvcfflspnnglsk*wfihfxllyyiyi
*ifi*yynkkkkkk*rkpkqfkiiqktssrsraaatavelqfal

Homology SSC426 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SSC426 (SSC426Q) /CSM/SS/SSC4-B/SSC426Q.Seq.d/                       1132   0.0
FC-BP21 (FC-BP21Q) /CSM/FC/FC-BP/FC-BP21Q.Seq.d/                      839   0.0
SSE614 (SSE614Q) /CSM/SS/SSE6-A/SSE614Q.Seq.d/                        670   0.0
SSH125 (SSH125Q) /CSM/SS/SSH1-B/SSH125Q.Seq.d/                        107   3e-22
SSE156 (SSE156Q) /CSM/SS/SSE1-C/SSE156Q.Seq.d/                         98   3e-19
SSL895 (SSL895Q) /CSM/SS/SSL8-D/SSL895Q.Seq.d/                         96   1e-18
SSK277 (SSK277Q) /CSM/SS/SSK2-D/SSK277Q.Seq.d/                         96   1e-18
SSK231 (SSK231Q) /CSM/SS/SSK2-B/SSK231Q.Seq.d/                         96   1e-18
SSL525 (SSL525Q) /CSM/SS/SSL5-B/SSL525Q.Seq.d/                         86   1e-15
SSC420 (SSC420Q) /CSM/SS/SSC4-A/SSC420Q.Seq.d/                         84   4e-15

Homology SSC426 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU051933) Dictyostelium discoideum slug cDNA, clone SSC426.     1053   0.0    2
(AU284918) Dictyostelium discoideum gamete cDNA clone:FC-BP2...   668   0.0    7
(C92472) Dictyostelium discoideum slug cDNA, clone SSE614.        573   0.0    6
(AU038631) Dictyostelium discoideum slug cDNA, clone SSL278.      105   3e-18  1
(AU037985) Dictyostelium discoideum slug cDNA, clone SSH125.      103   1e-17  1
(AU071742) Dictyostelium discoideum slug cDNA, clone SSC426.       72   7e-16  4
(AU037670) Dictyostelium discoideum slug cDNA, clone SSE156.       94   1e-14  1
(C93949) Dictyostelium discoideum slug cDNA, clone SSL895.         92   5e-14  1
(C91424) Dictyostelium discoideum slug cDNA, clone SSK231.         92   5e-14  1
(C91307) Dictyostelium discoideum slug cDNA, clone SSK277.         58   1e-12  2

Homology SSC426 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC115598_20(AC115598|pid:none) Dictyostelium discoideum chromoso...   215   2e-54
GU001954_12(GU001954|pid:none) Musculista senhousia voucher Mse-...    37   1.6
CP000849_634(CP000849|pid:none) Rickettsia bellii OSU 85-389, co...    37   1.6
CT025776_6(CT025776|pid:none) Zebrafish DNA sequence from clone ...    37   1.6
BC093203_1(BC093203|pid:none) Danio rerio zgc:112101, mRNA (cDNA...    37   1.6
CP000087_603(CP000087|pid:none) Rickettsia bellii RML369-C, comp...    36   2.1
BC067571_1(BC067571|pid:none) Danio rerio zgc:85676, mRNA (cDNA ...    36   2.8
CP000439_1008(CP000439|pid:none) Francisella tularensis subsp. n...    35   4.7
CP000608_876(CP000608|pid:none) Francisella tularensis subsp. tu...    35   4.7
CP002557_1071(CP002557|pid:none) Francisella cf. novicida Fx1, c...    35   4.7

Homology SSC426 vs Genome